RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 KRTAP9-7A8MTY7 169 aa8.23□□□□□ -1.09
DDX39A-212ENST00000590260 J3QR89 54 aa8.21□□□□□ -1.1
DDX39A-212ENST00000590260 MT1BP07438 61 aa8.21□□□□□ -1.1
DDX39A-212ENST00000590260 SPRR2GQ9BYE4 73 aa8.21□□□□□ -1.1
DDX39A-212ENST00000590260 KRTAP19-8Q3LI54 63 aa8.17□□□□□ -1.1
DDX39A-212ENST00000590260 MP68P56378 58 aa8.13□□□□□ -1.11
DDX39A-212ENST00000590260 A8MUN3 132 aa8.11□□□□□ -1.11
DDX39A-212ENST00000590260 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
DDX39A-212ENST00000590260 MT-ATP8P03928 68 aa8.08□□□□□ -1.12
DDX39A-212ENST00000590260 NDUFC1O43677 76 aa8.07□□□□□ -1.12
DDX39A-212ENST00000590260 H3BPC8 53 aa8.06□□□□□ -1.12
DDX39A-212ENST00000590260 Q5VV11 94 aa8.06□□□□□ -1.12
DDX39A-212ENST00000590260 H0YAA0 97 aa8.05□□□□□ -1.12
DDX39A-212ENST00000590260 IMUPQ9GZP8 106 aa8.04□□□□□ -1.12
DDX39A-212ENST00000590260 SCGB1A1P11684 91 aa8.03□□□□□ -1.12
DDX39A-212ENST00000590260 CRIPTQ9P021 101 aa8□□□□□ -1.13
DDX39A-212ENST00000590260 K7ERU9 68 aa7.99□□□□□ -1.13
DDX39A-212ENST00000590260 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
DDX39A-212ENST00000590260 SYNE2Q8WXH0 6885 aaKnown RBP7.98□□□□□ -1.13
DDX39A-212ENST00000590260 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
DDX39A-212ENST00000590260 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
DDX39A-212ENST00000590260 A6NN06 94 aa7.93□□□□□ -1.14
DDX39A-212ENST00000590260 TRAV7A0A075B6U4 112 aa7.9□□□□□ -1.14
DDX39A-212ENST00000590260 P0C880 135 aa7.87□□□□□ -1.15
DDX39A-212ENST00000590260 KRTAP6-3Q3LI67 103 aa7.86□□□□□ -1.15
DDX39A-212ENST00000590260 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
DDX39A-212ENST00000590260 SMIM20Q8N5G0 67 aa7.83□□□□□ -1.16
DDX39A-212ENST00000590260 SNURFQ9Y675 71 aa7.77□□□□□ -1.17
DDX39A-212ENST00000590260 ACYP2P14621 99 aa7.73□□□□□ -1.17
DDX39A-212ENST00000590260 MT1XP80297 61 aa7.7□□□□□ -1.18
DDX39A-212ENST00000590260 R4GN34 69 aa7.7□□□□□ -1.18
DDX39A-212ENST00000590260 M0QZ58 72 aa7.67□□□□□ -1.18
DDX39A-212ENST00000590260 SERP2Q8N6R1 65 aa7.67□□□□□ -1.18
DDX39A-212ENST00000590260 C20orf197Q8N268 126 aa7.66□□□□□ -1.18
DDX39A-212ENST00000590260 SPANXA2-OT1Q8N9U9 137 aa7.61□□□□□ -1.19
DDX39A-212ENST00000590260 PLAC4Q8WY50 150 aa7.59□□□□□ -1.19
DDX39A-212ENST00000590260 KRTAP5-9P26371 169 aa7.58□□□□□ -1.2
DDX39A-212ENST00000590260 MUC12Q9UKN1 5478 aa7.56□□□□□ -1.2
DDX39A-212ENST00000590260 CHKB-CPT1BH3BT56 60 aa7.55□□□□□ -1.2
DDX39A-212ENST00000590260 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
DDX39A-212ENST00000590260 LINC01554Q52M75 96 aa7.54□□□□□ -1.2
DDX39A-212ENST00000590260 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
DDX39A-212ENST00000590260 KMT2DO14686 5537 aa7.52□□□□□ -1.21
DDX39A-212ENST00000590260 NEBP20929 6669 aa7.51□□□□□ -1.21
DDX39A-212ENST00000590260 CYSTM1Q9H1C7 97 aa7.47□□□□□ -1.21
DDX39A-212ENST00000590260 COX7CP15954 63 aa7.46□□□□□ -1.22
DDX39A-212ENST00000590260 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
DDX39A-212ENST00000590260 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
DDX39A-212ENST00000590260 COA5Q86WW8 74 aa7.42□□□□□ -1.22
DDX39A-212ENST00000590260 H7BZZ5 65 aa7.38□□□□□ -1.23
DDX39A-212ENST00000590260 MDN1Q9NU22 5596 aa7.37□□□□□ -1.23
DDX39A-212ENST00000590260 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
DDX39A-212ENST00000590260 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
DDX39A-212ENST00000590260 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
DDX39A-212ENST00000590260 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
DDX39A-212ENST00000590260 SPRR2FQ96RM1 72 aa7.31□□□□□ -1.24
DDX39A-212ENST00000590260 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
DDX39A-212ENST00000590260 ANAPC13Q9BS18 74 aa7.2□□□□□ -1.26
DDX39A-212ENST00000590260 KRTAP20-1Q3LI63 56 aa7.19□□□□□ -1.26
DDX39A-212ENST00000590260 SPRR2EP22531 72 aa7.18□□□□□ -1.26
DDX39A-212ENST00000590260 SPRR2BP35325 72 aa7.18□□□□□ -1.26
DDX39A-212ENST00000590260 SPRR2AP35326 72 aa7.18□□□□□ -1.26
DDX39A-212ENST00000590260 LCE1AQ5T7P2 110 aa7.17□□□□□ -1.26
DDX39A-212ENST00000590260 CCDC179H3BU77 68 aa7.16□□□□□ -1.26
DDX39A-212ENST00000590260 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
DDX39A-212ENST00000590260 SERP1Q9Y6X1 66 aa7.13□□□□□ -1.27
DDX39A-212ENST00000590260 A0A0D9SG42 100 aa7.1□□□□□ -1.27
DDX39A-212ENST00000590260 SEC61GP60059 68 aa7.1□□□□□ -1.27
DDX39A-212ENST00000590260 A0A1B0GU33 70 aa7.08□□□□□ -1.28
DDX39A-212ENST00000590260 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
DDX39A-212ENST00000590260 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
DDX39A-212ENST00000590260 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
DDX39A-212ENST00000590260 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
DDX39A-212ENST00000590260 A0A1B0GU69 56 aa6.97□□□□□ -1.29
DDX39A-212ENST00000590260 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
DDX39A-212ENST00000590260 SPRR2DP22532 72 aa6.93□□□□□ -1.3
DDX39A-212ENST00000590260 A8MU10 97 aa6.92□□□□□ -1.3
DDX39A-212ENST00000590260 ATP5EP56381 51 aaPredicted RBP6.91□□□□□ -1.3
DDX39A-212ENST00000590260 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.3
DDX39A-212ENST00000590260 SMIM26A0A096LP01 95 aa6.83□□□□□ -1.32
DDX39A-212ENST00000590260 KRTAP2-2Q9BYT5 123 aa6.81□□□□□ -1.32
DDX39A-212ENST00000590260 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
DDX39A-212ENST00000590260 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
DDX39A-212ENST00000590260 MT1EP04732 61 aa6.8□□□□□ -1.32
DDX39A-212ENST00000590260 TMEM258P61165 79 aa6.79□□□□□ -1.32
DDX39A-212ENST00000590260 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
DDX39A-212ENST00000590260 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
DDX39A-212ENST00000590260 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
DDX39A-212ENST00000590260 PRR15LQ9BU68 103 aa6.72□□□□□ -1.33
DDX39A-212ENST00000590260 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
DDX39A-212ENST00000590260 KRTAP19-3Q7Z4W3 81 aa6.69□□□□□ -1.34
DDX39A-212ENST00000590260 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
DDX39A-212ENST00000590260 UQCR11O14957 56 aa6.56□□□□□ -1.36
DDX39A-212ENST00000590260 TNP1P09430 55 aa6.55□□□□□ -1.36
DDX39A-212ENST00000590260 MT1GP13640 62 aa6.51□□□□□ -1.37
DDX39A-212ENST00000590260 MT1LQ93083 61 aa6.51□□□□□ -1.37
DDX39A-212ENST00000590260 MT1MQ8N339 61 aa6.47□□□□□ -1.37
DDX39A-212ENST00000590260 DSTQ03001 7570 aaKnown RBP6.46□□□□□ -1.38
DDX39A-212ENST00000590260 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
DDX39A-212ENST00000590260 PSPHP1O15172 72 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms