RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 A8MUN3 132 aa12.41□□□□□ -0.42
CIRBP-223ENST00000589266 NDUFC1O43677 76 aa12.4□□□□□ -0.42
CIRBP-223ENST00000589266 SSPOA2VEC9 5147 aa12.36□□□□□ -0.43
CIRBP-223ENST00000589266 SPANXA2-OT1Q8N9U9 137 aa12.34□□□□□ -0.43
CIRBP-223ENST00000589266 CCDC179H3BU77 68 aa12.32□□□□□ -0.44
CIRBP-223ENST00000589266 USH2AO75445 5202 aa12.31□□□□□ -0.44
CIRBP-223ENST00000589266 DMAC1Q96GE9 116 aa12.3□□□□□ -0.44
CIRBP-223ENST00000589266 H7BZZ5 65 aa12.26□□□□□ -0.45
CIRBP-223ENST00000589266 CYSTM1Q9H1C7 97 aa12.24□□□□□ -0.45
CIRBP-223ENST00000589266 FCGBPQ9Y6R7 5405 aaPredicted RBP12.2□□□□□ -0.46
CIRBP-223ENST00000589266 S4R3F8 94 aa12.2□□□□□ -0.46
CIRBP-223ENST00000589266 ACYP2P14621 99 aa12.17□□□□□ -0.46
CIRBP-223ENST00000589266 KRTAP9-8Q9BYQ0 159 aa12.14□□□□□ -0.47
CIRBP-223ENST00000589266 LCA10Q71F78 164 aa12.11□□□□□ -0.47
CIRBP-223ENST00000589266 CSAG1Q6PB30 78 aa12.04□□□□□ -0.48
CIRBP-223ENST00000589266 KRTAP19-1Q8IUB9 90 aa12.03□□□□□ -0.48
CIRBP-223ENST00000589266 KRTAP3-3Q9BYR6 98 aa12.03□□□□□ -0.48
CIRBP-223ENST00000589266 PCP4P48539 62 aa12.02□□□□□ -0.49
CIRBP-223ENST00000589266 ATP5EP56381 51 aaPredicted RBP12.01□□□□□ -0.49
CIRBP-223ENST00000589266 TMEM258P61165 79 aa11.98□□□□□ -0.49
CIRBP-223ENST00000589266 SYNE2Q8WXH0 6885 aaKnown RBP11.98□□□□□ -0.49
CIRBP-223ENST00000589266 MACF1Q9UPN3 7388 aaKnown RBP11.93□□□□□ -0.5
CIRBP-223ENST00000589266 CHKB-CPT1BH3BT56 60 aa11.92□□□□□ -0.5
CIRBP-223ENST00000589266 LCE2BO14633 110 aa11.9□□□□□ -0.5
CIRBP-223ENST00000589266 SPTSSBQ8NFR3 76 aa11.89□□□□□ -0.51
CIRBP-223ENST00000589266 MT2AP02795 61 aa11.88□□□□□ -0.51
CIRBP-223ENST00000589266 COA5Q86WW8 74 aa11.88□□□□□ -0.51
CIRBP-223ENST00000589266 KRTAP9-3Q9BYQ3 159 aa11.79□□□□□ -0.52
CIRBP-223ENST00000589266 MT1FP04733 61 aa11.78□□□□□ -0.52
CIRBP-223ENST00000589266 H0YAA0 97 aa11.75□□□□□ -0.53
CIRBP-223ENST00000589266 KRTAP10-10P60014 251 aa11.74□□□□□ -0.53
CIRBP-223ENST00000589266 KRTAP19-6Q3LI70 58 aa11.63□□□□□ -0.55
CIRBP-223ENST00000589266 SERP1Q9Y6X1 66 aa11.6□□□□□ -0.55
CIRBP-223ENST00000589266 KRTAP6-3Q3LI67 103 aa11.58□□□□□ -0.56
CIRBP-223ENST00000589266 ADM2Q7Z4H4 148 aa11.56□□□□□ -0.56
CIRBP-223ENST00000589266 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
CIRBP-223ENST00000589266 CRIPTQ9P021 101 aa11.47□□□□□ -0.57
CIRBP-223ENST00000589266 SEC61GP60059 68 aa11.4□□□□□ -0.58
CIRBP-223ENST00000589266 P0C880 135 aa11.39□□□□□ -0.59
CIRBP-223ENST00000589266 RPS28P62857 69 aaKnown RBP11.37□□□□□ -0.59
CIRBP-223ENST00000589266 NEBP20929 6669 aa11.31□□□□□ -0.6
CIRBP-223ENST00000589266 SPRR2GQ9BYE4 73 aa11.29□□□□□ -0.6
CIRBP-223ENST00000589266 LINC01558Q9Y6Z2 57 aa11.29□□□□□ -0.6
CIRBP-223ENST00000589266 A0A1B0GU69 56 aa11.27□□□□□ -0.61
CIRBP-223ENST00000589266 SMIM26A0A096LP01 95 aa11.23□□□□□ -0.61
CIRBP-223ENST00000589266 PRR15LQ9BU68 103 aa11.22□□□□□ -0.61
CIRBP-223ENST00000589266 R4GN34 69 aa11.22□□□□□ -0.61
CIRBP-223ENST00000589266 V9GYY9 64 aa11.21□□□□□ -0.61
CIRBP-223ENST00000589266 M0QZ58 72 aa11.19□□□□□ -0.62
CIRBP-223ENST00000589266 Q1T7F1 81 aa11.14□□□□□ -0.63
CIRBP-223ENST00000589266 A0A1B0GU33 70 aa11.1□□□□□ -0.63
CIRBP-223ENST00000589266 KRTAP20-1Q3LI63 56 aa11.1□□□□□ -0.63
CIRBP-223ENST00000589266 MUC12Q9UKN1 5478 aa11.09□□□□□ -0.63
CIRBP-223ENST00000589266 KRTAP19-8Q3LI54 63 aa11.09□□□□□ -0.63
CIRBP-223ENST00000589266 Q5VV11 94 aa11.06□□□□□ -0.64
CIRBP-223ENST00000589266 KRTAP13-4Q3LI77 160 aa10.97□□□□□ -0.65
CIRBP-223ENST00000589266 MT1BP07438 61 aa10.92□□□□□ -0.66
CIRBP-223ENST00000589266 LINC01554Q52M75 96 aa10.9□□□□□ -0.66
CIRBP-223ENST00000589266 PSPHP1O15172 72 aa10.88□□□□□ -0.67
CIRBP-223ENST00000589266 A6NN06 94 aa10.87□□□□□ -0.67
CIRBP-223ENST00000589266 SPATA8Q6RVD6 105 aa10.87□□□□□ -0.67
CIRBP-223ENST00000589266 UQCR11O14957 56 aa10.85□□□□□ -0.67
CIRBP-223ENST00000589266 PLAC4Q8WY50 150 aa10.79□□□□□ -0.68
CIRBP-223ENST00000589266 KRTAP5-9P26371 169 aa10.71□□□□□ -0.69
CIRBP-223ENST00000589266 A0A0D9SG42 100 aa10.7□□□□□ -0.7
CIRBP-223ENST00000589266 MDN1Q9NU22 5596 aa10.68□□□□□ -0.7
CIRBP-223ENST00000589266 KMT2DO14686 5537 aa10.68□□□□□ -0.7
CIRBP-223ENST00000589266 MIR22HGQ0VDD5 57 aa10.66□□□□□ -0.7
CIRBP-223ENST00000589266 A8MU10 97 aa10.62□□□□□ -0.71
CIRBP-223ENST00000589266 KRTAP2-3P0C7H8 128 aa10.61□□□□□ -0.71
CIRBP-223ENST00000589266 KRTAP2-4Q9BYR9 128 aa10.61□□□□□ -0.71
CIRBP-223ENST00000589266 A6NED7 52 aa10.6□□□□□ -0.71
CIRBP-223ENST00000589266 KRTAP12-1P59990 96 aa10.57□□□□□ -0.72
CIRBP-223ENST00000589266 KRTAP10-5P60370 271 aa10.54□□□□□ -0.72
CIRBP-223ENST00000589266 SPINT4Q6UDR6 99 aa10.53□□□□□ -0.72
CIRBP-223ENST00000589266 PRO2289Q9P1D8 64 aa10.49□□□□□ -0.73
CIRBP-223ENST00000589266 KRTAP12-2P59991 146 aa10.48□□□□□ -0.73
CIRBP-223ENST00000589266 MT1XP80297 61 aa10.44□□□□□ -0.74
CIRBP-223ENST00000589266 CAMK2N1Q7Z7J9 78 aa10.44□□□□□ -0.74
CIRBP-223ENST00000589266 CDC42SE1Q9NRR8 79 aa10.37□□□□□ -0.75
CIRBP-223ENST00000589266 K7ERS5 55 aa10.34□□□□□ -0.75
CIRBP-223ENST00000589266 SPRR2EP22531 72 aa10.26□□□□□ -0.77
CIRBP-223ENST00000589266 SPRR2BP35325 72 aa10.26□□□□□ -0.77
CIRBP-223ENST00000589266 SPRR2AP35326 72 aa10.26□□□□□ -0.77
CIRBP-223ENST00000589266 SPRR2FQ96RM1 72 aa10.23□□□□□ -0.77
CIRBP-223ENST00000589266 KRTAP2-2Q9BYT5 123 aa10.22□□□□□ -0.77
CIRBP-223ENST00000589266 KRTAP2-1Q9BYU5 128 aa10.22□□□□□ -0.77
CIRBP-223ENST00000589266 BRK1Q8WUW1 75 aa10.04□□□□□ -0.8
CIRBP-223ENST00000589266 C10orf95Q9H7T3 257 aa10.03□□□□□ -0.8
CIRBP-223ENST00000589266 LCE1AQ5T7P2 110 aa10□□□□□ -0.81
CIRBP-223ENST00000589266 KRTAP10-12P60413 245 aa9.96□□□□□ -0.82
CIRBP-223ENST00000589266 KRTAP10-7P60409 375 aaPredicted RBP9.95□□□□□ -0.82
CIRBP-223ENST00000589266 SPRR2DP22532 72 aa9.93□□□□□ -0.82
CIRBP-223ENST00000589266 KRTAP8-1Q8IUC2 63 aa9.93□□□□□ -0.82
CIRBP-223ENST00000589266 TNP1P09430 55 aa9.88□□□□□ -0.83
CIRBP-223ENST00000589266 ROMO1P60602 79 aa9.77□□□□□ -0.85
CIRBP-223ENST00000589266 KRTAP25-1Q3LHN0 102 aa9.77□□□□□ -0.85
CIRBP-223ENST00000589266 GPR98Q8WXG9 6306 aa9.73□□□□□ -0.85
CIRBP-223ENST00000589266 LCE3BQ5TA77 95 aa9.72□□□□□ -0.85
CIRBP-223ENST00000589266 KRTAP4-8A0A0G2JLE6 195 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms