RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
DDX39A-204ENST00000586558 C20orf197Q8N268 126 aa9.06□□□□□ -0.96
DDX39A-204ENST00000586558 DMAC1Q96GE9 116 aa9.06□□□□□ -0.96
DDX39A-204ENST00000586558 CRCT1Q9UGL9 99 aa9.05□□□□□ -0.96
DDX39A-204ENST00000586558 SNURFQ9Y675 71 aa9.05□□□□□ -0.96
DDX39A-204ENST00000586558 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
DDX39A-204ENST00000586558 NDUFC1O43677 76 aa9.02□□□□□ -0.97
DDX39A-204ENST00000586558 COX7CP15954 63 aa9□□□□□ -0.97
DDX39A-204ENST00000586558 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
DDX39A-204ENST00000586558 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
DDX39A-204ENST00000586558 ACYP2P14621 99 aa8.92□□□□□ -0.98
DDX39A-204ENST00000586558 ANAPC13Q9BS18 74 aa8.91□□□□□ -0.98
DDX39A-204ENST00000586558 H0YAA0 97 aa8.85□□□□□ -0.99
DDX39A-204ENST00000586558 LCE2BO14633 110 aa8.78□□□□□ -1
DDX39A-204ENST00000586558 SPTSSBQ8NFR3 76 aa8.77□□□□□ -1.01
DDX39A-204ENST00000586558 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
DDX39A-204ENST00000586558 H7BZZ5 65 aa8.76□□□□□ -1.01
DDX39A-204ENST00000586558 USH2AO75445 5202 aa8.74□□□□□ -1.01
DDX39A-204ENST00000586558 CYSTM1Q9H1C7 97 aa8.73□□□□□ -1.01
DDX39A-204ENST00000586558 CRIPTQ9P021 101 aa8.72□□□□□ -1.01
DDX39A-204ENST00000586558 ADM2Q7Z4H4 148 aa8.71□□□□□ -1.02
DDX39A-204ENST00000586558 CCDC179H3BU77 68 aa8.68□□□□□ -1.02
DDX39A-204ENST00000586558 KRTAP19-1Q8IUB9 90 aa8.68□□□□□ -1.02
DDX39A-204ENST00000586558 SPRR2GQ9BYE4 73 aa8.67□□□□□ -1.02
DDX39A-204ENST00000586558 SSPOA2VEC9 5147 aa8.67□□□□□ -1.02
DDX39A-204ENST00000586558 COA5Q86WW8 74 aa8.63□□□□□ -1.03
DDX39A-204ENST00000586558 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
DDX39A-204ENST00000586558 P0C880 135 aa8.55□□□□□ -1.04
DDX39A-204ENST00000586558 KRTAP19-8Q3LI54 63 aa8.54□□□□□ -1.04
DDX39A-204ENST00000586558 ATP5EP56381 51 aaPredicted RBP8.53□□□□□ -1.04
DDX39A-204ENST00000586558 Q5VV11 94 aa8.5□□□□□ -1.05
DDX39A-204ENST00000586558 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
DDX39A-204ENST00000586558 R4GN34 69 aa8.48□□□□□ -1.05
DDX39A-204ENST00000586558 MT1BP07438 61 aa8.45□□□□□ -1.06
DDX39A-204ENST00000586558 TMEM258P61165 79 aa8.44□□□□□ -1.06
DDX39A-204ENST00000586558 KRTAP19-6Q3LI70 58 aa8.44□□□□□ -1.06
DDX39A-204ENST00000586558 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.41□□□□□ -1.06
DDX39A-204ENST00000586558 M0QZ58 72 aa8.41□□□□□ -1.06
DDX39A-204ENST00000586558 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
DDX39A-204ENST00000586558 SEC61GP60059 68 aa8.35□□□□□ -1.07
DDX39A-204ENST00000586558 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
DDX39A-204ENST00000586558 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
DDX39A-204ENST00000586558 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
DDX39A-204ENST00000586558 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
DDX39A-204ENST00000586558 SYNE2Q8WXH0 6885 aaKnown RBP8.22□□□□□ -1.09
DDX39A-204ENST00000586558 A6NN06 94 aa8.21□□□□□ -1.1
DDX39A-204ENST00000586558 A0A1B0GU69 56 aa8.19□□□□□ -1.1
DDX39A-204ENST00000586558 KRTAP10-5P60370 271 aa8.19□□□□□ -1.1
DDX39A-204ENST00000586558 KRTAP13-4Q3LI77 160 aa8.15□□□□□ -1.1
DDX39A-204ENST00000586558 A0A1B0GU33 70 aa8.14□□□□□ -1.11
DDX39A-204ENST00000586558 PCP4P48539 62 aa8.14□□□□□ -1.11
DDX39A-204ENST00000586558 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
DDX39A-204ENST00000586558 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
DDX39A-204ENST00000586558 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
DDX39A-204ENST00000586558 MT1XP80297 61 aa8.03□□□□□ -1.12
DDX39A-204ENST00000586558 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
DDX39A-204ENST00000586558 A0A0D9SG42 100 aa7.96□□□□□ -1.14
DDX39A-204ENST00000586558 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
DDX39A-204ENST00000586558 V9GYY9 64 aa7.92□□□□□ -1.14
DDX39A-204ENST00000586558 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
DDX39A-204ENST00000586558 KRTAP6-3Q3LI67 103 aa7.86□□□□□ -1.15
DDX39A-204ENST00000586558 RPS28P62857 69 aaKnown RBP7.85□□□□□ -1.15
DDX39A-204ENST00000586558 Q1T7F1 81 aa7.85□□□□□ -1.15
DDX39A-204ENST00000586558 UQCR11O14957 56 aa7.83□□□□□ -1.16
DDX39A-204ENST00000586558 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
DDX39A-204ENST00000586558 SPINT4Q6UDR6 99 aa7.82□□□□□ -1.16
DDX39A-204ENST00000586558 A8MU10 97 aa7.8□□□□□ -1.16
DDX39A-204ENST00000586558 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
DDX39A-204ENST00000586558 PSPHP1O15172 72 aa7.74□□□□□ -1.17
DDX39A-204ENST00000586558 NEBP20929 6669 aa7.73□□□□□ -1.17
DDX39A-204ENST00000586558 MUC12Q9UKN1 5478 aa7.69□□□□□ -1.18
DDX39A-204ENST00000586558 MIR22HGQ0VDD5 57 aa7.67□□□□□ -1.18
DDX39A-204ENST00000586558 KRTAP10-7P60409 375 aaPredicted RBP7.65□□□□□ -1.18
DDX39A-204ENST00000586558 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
DDX39A-204ENST00000586558 KRTAP5-9P26371 169 aa7.57□□□□□ -1.2
DDX39A-204ENST00000586558 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
DDX39A-204ENST00000586558 A6NED7 52 aa7.53□□□□□ -1.2
DDX39A-204ENST00000586558 MDN1Q9NU22 5596 aa7.53□□□□□ -1.2
DDX39A-204ENST00000586558 KMT2DO14686 5537 aa7.51□□□□□ -1.21
DDX39A-204ENST00000586558 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
DDX39A-204ENST00000586558 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
DDX39A-204ENST00000586558 K7ERS5 55 aa7.49□□□□□ -1.21
DDX39A-204ENST00000586558 SPRR2FQ96RM1 72 aa7.43□□□□□ -1.22
DDX39A-204ENST00000586558 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
DDX39A-204ENST00000586558 TNP1P09430 55 aa7.37□□□□□ -1.23
DDX39A-204ENST00000586558 KRTAP20-1Q3LI63 56 aa7.31□□□□□ -1.24
DDX39A-204ENST00000586558 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
DDX39A-204ENST00000586558 SPRR2EP22531 72 aa7.22□□□□□ -1.25
DDX39A-204ENST00000586558 SPRR2BP35325 72 aa7.22□□□□□ -1.25
DDX39A-204ENST00000586558 SPRR2AP35326 72 aa7.22□□□□□ -1.25
DDX39A-204ENST00000586558 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
DDX39A-204ENST00000586558 LCE1AQ5T7P2 110 aa7.19□□□□□ -1.26
DDX39A-204ENST00000586558 KRTAP19-7Q3SYF9 63 aa7.17□□□□□ -1.26
DDX39A-204ENST00000586558 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
DDX39A-204ENST00000586558 KRTAP2-3P0C7H8 128 aa7.11□□□□□ -1.27
DDX39A-204ENST00000586558 KRTAP2-4Q9BYR9 128 aa7.11□□□□□ -1.27
DDX39A-204ENST00000586558 MT1EP04732 61 aa7.09□□□□□ -1.27
DDX39A-204ENST00000586558 KRTAP19-5Q3LI72 72 aa7.09□□□□□ -1.27
DDX39A-204ENST00000586558 ROMO1P60602 79 aa7.03□□□□□ -1.28
DDX39A-204ENST00000586558 SPRR2DP22532 72 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms