RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 K7ERS5 55 aa9.69□□□□□ -0.86
PKN1-204ENST00000585839 RYR2Q92736 4967 aa9.69□□□□□ -0.86
PKN1-204ENST00000585839 LINC01554Q52M75 96 aa9.64□□□□□ -0.87
PKN1-204ENST00000585839 XP32Q5T750 250 aa9.63□□□□□ -0.87
PKN1-204ENST00000585839 RYR3Q15413 4870 aa9.62□□□□□ -0.87
PKN1-204ENST00000585839 RYR1P21817 5038 aa9.62□□□□□ -0.87
PKN1-204ENST00000585839 KRTAP17-1Q9BYP8 105 aa9.61□□□□□ -0.87
PKN1-204ENST00000585839 S4R3F8 94 aa9.6□□□□□ -0.87
PKN1-204ENST00000585839 HSPG2P98160 4391 aa9.6□□□□□ -0.87
PKN1-204ENST00000585839 SPINT4Q6UDR6 99 aa9.59□□□□□ -0.87
PKN1-204ENST00000585839 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
PKN1-204ENST00000585839 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
PKN1-204ENST00000585839 KRTAP21-3Q3LHN1 58 aa9.54□□□□□ -0.88
PKN1-204ENST00000585839 P0C880 135 aa9.53□□□□□ -0.88
PKN1-204ENST00000585839 LRP2P98164 4655 aa9.47□□□□□ -0.89
PKN1-204ENST00000585839 KRTAP13-4Q3LI77 160 aa9.47□□□□□ -0.89
PKN1-204ENST00000585839 LPAP08519 4548 aa9.44□□□□□ -0.9
PKN1-204ENST00000585839 C10orf95Q9H7T3 257 aa9.4□□□□□ -0.9
PKN1-204ENST00000585839 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
PKN1-204ENST00000585839 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
PKN1-204ENST00000585839 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
PKN1-204ENST00000585839 KRTAP25-1Q3LHN0 102 aa9.33□□□□□ -0.92
PKN1-204ENST00000585839 MT1HL1P0DM35 61 aa9.33□□□□□ -0.92
PKN1-204ENST00000585839 J3QL48 77 aa9.32□□□□□ -0.92
PKN1-204ENST00000585839 EPPK1P58107 5090 aaKnown RBP9.32□□□□□ -0.92
PKN1-204ENST00000585839 TNXBP22105 4242 aa9.29□□□□□ -0.92
PKN1-204ENST00000585839 ROMO1P60602 79 aa9.27□□□□□ -0.93
PKN1-204ENST00000585839 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
PKN1-204ENST00000585839 ABCA13Q86UQ4 5058 aa9.24□□□□□ -0.93
PKN1-204ENST00000585839 KRTAP12-2P59991 146 aa9.19□□□□□ -0.94
PKN1-204ENST00000585839 M0QZ58 72 aa9.19□□□□□ -0.94
PKN1-204ENST00000585839 R4GN34 69 aa9.12□□□□□ -0.95
PKN1-204ENST00000585839 H3BS24 57 aa9.07□□□□□ -0.96
PKN1-204ENST00000585839 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
PKN1-204ENST00000585839 MUC2Q02817 5179 aa9.05□□□□□ -0.96
PKN1-204ENST00000585839 KRTAP12-1P59990 96 aa8.98□□□□□ -0.97
PKN1-204ENST00000585839 SEC61BP60468 96 aaKnown RBP8.94□□□□□ -0.98
PKN1-204ENST00000585839 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
PKN1-204ENST00000585839 HERC2O95714 4834 aa8.9□□□□□ -0.99
PKN1-204ENST00000585839 KRTAP4-1Q9BYQ7 146 aa8.87□□□□□ -0.99
PKN1-204ENST00000585839 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
PKN1-204ENST00000585839 NDUFAF8A1L188 74 aa8.72□□□□□ -1.01
PKN1-204ENST00000585839 HERC1Q15751 4861 aa8.65□□□□□ -1.02
PKN1-204ENST00000585839 M0R2T5 61 aa8.65□□□□□ -1.02
PKN1-204ENST00000585839 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
PKN1-204ENST00000585839 RNF213Q63HN8 5207 aa8.56□□□□□ -1.04
PKN1-204ENST00000585839 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
PKN1-204ENST00000585839 PCLOQ9Y6V0 5065 aa8.39□□□□□ -1.07
PKN1-204ENST00000585839 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
PKN1-204ENST00000585839 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
PKN1-204ENST00000585839 UBR4Q5T4S7 5183 aa8.28□□□□□ -1.08
PKN1-204ENST00000585839 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
PKN1-204ENST00000585839 KRTAP19-2Q3LHN2 52 aa8.19□□□□□ -1.1
PKN1-204ENST00000585839 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
PKN1-204ENST00000585839 TNP1P09430 55 aa8.15□□□□□ -1.1
PKN1-204ENST00000585839 LUZP6Q538Z0 58 aa8.12□□□□□ -1.11
PKN1-204ENST00000585839 HMCN2Q8NDA2 5059 aa8.11□□□□□ -1.11
PKN1-204ENST00000585839 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
PKN1-204ENST00000585839 PP632Q6XCG6 107 aa7.9□□□□□ -1.14
PKN1-204ENST00000585839 LCE2CQ5TA81 110 aa7.9□□□□□ -1.15
PKN1-204ENST00000585839 MT1HP80294 61 aa7.85□□□□□ -1.15
PKN1-204ENST00000585839 MT1FP04733 61 aa7.83□□□□□ -1.16
PKN1-204ENST00000585839 KRTAP19-1Q8IUB9 90 aa7.81□□□□□ -1.16
PKN1-204ENST00000585839 LCE3AQ5TA76 89 aa7.76□□□□□ -1.17
PKN1-204ENST00000585839 MT2AP02795 61 aa7.75□□□□□ -1.17
PKN1-204ENST00000585839 USH2AO75445 5202 aa7.71□□□□□ -1.18
PKN1-204ENST00000585839 SPRR2GQ9BYE4 73 aa7.64□□□□□ -1.19
PKN1-204ENST00000585839 FSIP2Q5CZC0 6907 aa7.61□□□□□ -1.19
PKN1-204ENST00000585839 A0A0A0MQY5 61 aa7.56□□□□□ -1.2
PKN1-204ENST00000585839 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
PKN1-204ENST00000585839 KMT2DO14686 5537 aa7.52□□□□□ -1.2
PKN1-204ENST00000585839 MT1BP07438 61 aa7.4□□□□□ -1.23
PKN1-204ENST00000585839 KRTAP10-12P60413 245 aa7.4□□□□□ -1.23
PKN1-204ENST00000585839 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
PKN1-204ENST00000585839 MT1XP80297 61 aa7.36□□□□□ -1.23
PKN1-204ENST00000585839 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
PKN1-204ENST00000585839 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
PKN1-204ENST00000585839 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
PKN1-204ENST00000585839 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
PKN1-204ENST00000585839 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.26
PKN1-204ENST00000585839 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
PKN1-204ENST00000585839 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
PKN1-204ENST00000585839 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
PKN1-204ENST00000585839 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
PKN1-204ENST00000585839 LCE2BO14633 110 aa7.11□□□□□ -1.27
PKN1-204ENST00000585839 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
PKN1-204ENST00000585839 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
PKN1-204ENST00000585839 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
PKN1-204ENST00000585839 DSTQ03001 7570 aaKnown RBP6.84□□□□□ -1.31
PKN1-204ENST00000585839 CRCT1Q9UGL9 99 aa6.77□□□□□ -1.32
PKN1-204ENST00000585839 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
PKN1-204ENST00000585839 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
PKN1-204ENST00000585839 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
PKN1-204ENST00000585839 MUC12Q9UKN1 5478 aa6.66□□□□□ -1.34
PKN1-204ENST00000585839 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
PKN1-204ENST00000585839 KRTAP9-6A8MVA2 160 aa6.59□□□□□ -1.36
PKN1-204ENST00000585839 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
PKN1-204ENST00000585839 OBSCNQ5VST9 7968 aa6.58□□□□□ -1.36
PKN1-204ENST00000585839 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
PKN1-204ENST00000585839 KRTAP4-3Q9BYR4 195 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms