RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
CDH8-214ENST00000585315 LORP23490 312 aaPredicted RBP2.97□□□□□ -1.93
CDH8-214ENST00000585315 ALMS1Q8TCU4 4167 aa2.95□□□□□ -1.94
CDH8-214ENST00000585315 ANK3Q12955 4377 aaKnown RBP2.95□□□□□ -1.94
CDH8-214ENST00000585315 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
CDH8-214ENST00000585315 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
CDH8-214ENST00000585315 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
CDH8-214ENST00000585315 KRTAP17-1Q9BYP8 105 aa2.92□□□□□ -1.94
CDH8-214ENST00000585315 KRTAP4-5Q9BYR2 181 aa2.92□□□□□ -1.94
CDH8-214ENST00000585315 LYSTQ99698 3801 aa2.87□□□□□ -1.95
CDH8-214ENST00000585315 DNAH2Q9P225 4427 aa2.85□□□□□ -1.95
CDH8-214ENST00000585315 DNAH5Q8TE73 4624 aa2.83□□□□□ -1.96
CDH8-214ENST00000585315 HUWE1Q7Z6Z7 4374 aaKnown RBP2.82□□□□□ -1.96
CDH8-214ENST00000585315 DNAH10Q8IVF4 4471 aa2.81□□□□□ -1.96
CDH8-214ENST00000585315 FAT1Q14517 4588 aa2.81□□□□□ -1.96
CDH8-214ENST00000585315 MT2AP02795 61 aa2.81□□□□□ -1.96
CDH8-214ENST00000585315 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
CDH8-214ENST00000585315 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
CDH8-214ENST00000585315 DNAH8Q96JB1 4490 aa2.79□□□□□ -1.96
CDH8-214ENST00000585315 ANK2Q01484 3957 aa2.79□□□□□ -1.96
CDH8-214ENST00000585315 MT1HP80294 61 aa2.79□□□□□ -1.96
CDH8-214ENST00000585315 DNAH1Q9P2D7 4330 aa2.79□□□□□ -1.96
CDH8-214ENST00000585315 CMYA5Q8N3K9 4069 aa2.79□□□□□ -1.96
CDH8-214ENST00000585315 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
CDH8-214ENST00000585315 DNAH11Q96DT5 4516 aa2.78□□□□□ -1.96
CDH8-214ENST00000585315 KRTAP4-1Q9BYQ7 146 aa2.77□□□□□ -1.97
CDH8-214ENST00000585315 KRTAP10-7P60409 375 aaPredicted RBP2.76□□□□□ -1.97
CDH8-214ENST00000585315 HECTD4Q9Y4D8 3996 aa2.74□□□□□ -1.97
CDH8-214ENST00000585315 KMT2AQ03164 3969 aa2.73□□□□□ -1.97
CDH8-214ENST00000585315 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
CDH8-214ENST00000585315 RYR1P21817 5038 aa2.72□□□□□ -1.97
CDH8-214ENST00000585315 MT1FP04733 61 aa2.71□□□□□ -1.98
CDH8-214ENST00000585315 FRAS1Q86XX4 4008 aa2.71□□□□□ -1.98
CDH8-214ENST00000585315 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
CDH8-214ENST00000585315 DNAH3Q8TD57 4116 aa2.7□□□□□ -1.98
CDH8-214ENST00000585315 DNAH7Q8WXX0 4024 aa2.69□□□□□ -1.98
CDH8-214ENST00000585315 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
CDH8-214ENST00000585315 DNAH9Q9NYC9 4486 aa2.68□□□□□ -1.98
CDH8-214ENST00000585315 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
CDH8-214ENST00000585315 DNAH17Q9UFH2 4485 aa2.66□□□□□ -1.98
CDH8-214ENST00000585315 KRTAP19-1Q8IUB9 90 aa2.66□□□□□ -1.98
CDH8-214ENST00000585315 LRP1Q07954 4544 aaKnown RBP2.64□□□□□ -1.99
CDH8-214ENST00000585315 SACSQ9NZJ4 4579 aa2.63□□□□□ -1.99
CDH8-214ENST00000585315 DNHD1Q96M86 4753 aa2.63□□□□□ -1.99
CDH8-214ENST00000585315 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
CDH8-214ENST00000585315 VPS13DQ5THJ4 4388 aa2.61□□□□□ -1.99
CDH8-214ENST00000585315 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
CDH8-214ENST00000585315 PRKDCP78527 4128 aaKnown RBP2.59□□□□□ -2
CDH8-214ENST00000585315 KRTAP12-4P60329 112 aa2.58□□□□□ -2
CDH8-214ENST00000585315 MYCBP2O75592 4640 aa2.57□□□□□ -2
CDH8-214ENST00000585315 LRP1BQ9NZR2 4599 aa2.57□□□□□ -2
CDH8-214ENST00000585315 DYNC1H1Q14204 4646 aaKnown RBP2.57□□□□□ -2
CDH8-214ENST00000585315 MT1XP80297 61 aa2.57□□□□□ -2
CDH8-214ENST00000585315 DYNC2H1Q8NCM8 4307 aaKnown RBP2.55□□□□□ -2
CDH8-214ENST00000585315 FAT2Q9NYQ8 4349 aa2.55□□□□□ -2
CDH8-214ENST00000585315 MT1GP13640 62 aa2.55□□□□□ -2
CDH8-214ENST00000585315 DNAH6Q9C0G6 4158 aa2.55□□□□□ -2
CDH8-214ENST00000585315 APOBP04114 4563 aaKnown RBP2.52□□□□□ -2.01
CDH8-214ENST00000585315 STARD9Q9P2P6 4700 aa2.52□□□□□ -2.01
CDH8-214ENST00000585315 MT1BP07438 61 aa2.51□□□□□ -2.01
CDH8-214ENST00000585315 LCE3BQ5TA77 95 aa2.49□□□□□ -2.01
CDH8-214ENST00000585315 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
CDH8-214ENST00000585315 KIAA1109Q2LD37 5005 aa2.49□□□□□ -2.01
CDH8-214ENST00000585315 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
CDH8-214ENST00000585315 KRTAP9-8Q9BYQ0 159 aa2.47□□□□□ -2.01
CDH8-214ENST00000585315 MT1LQ93083 61 aa2.45□□□□□ -2.02
CDH8-214ENST00000585315 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
CDH8-214ENST00000585315 RYR3Q15413 4870 aa2.44□□□□□ -2.02
CDH8-214ENST00000585315 PCLOQ9Y6V0 5065 aa2.43□□□□□ -2.02
CDH8-214ENST00000585315 LCE2BO14633 110 aa2.42□□□□□ -2.02
CDH8-214ENST00000585315 SPRR2EP22531 72 aa2.42□□□□□ -2.02
CDH8-214ENST00000585315 SPRR2BP35325 72 aa2.42□□□□□ -2.02
CDH8-214ENST00000585315 SPRR2AP35326 72 aa2.42□□□□□ -2.02
CDH8-214ENST00000585315 PKD1P98161 4303 aa2.42□□□□□ -2.02
CDH8-214ENST00000585315 KRTAP9-3Q9BYQ3 159 aa2.42□□□□□ -2.02
CDH8-214ENST00000585315 PKHD1P08F94 4074 aa2.41□□□□□ -2.02
CDH8-214ENST00000585315 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
CDH8-214ENST00000585315 LRP2P98164 4655 aa2.38□□□□□ -2.03
CDH8-214ENST00000585315 LCE2CQ5TA81 110 aa2.38□□□□□ -2.03
CDH8-214ENST00000585315 RYR2Q92736 4967 aa2.36□□□□□ -2.03
CDH8-214ENST00000585315 SPRR2DP22532 72 aa2.36□□□□□ -2.03
CDH8-214ENST00000585315 KRTAP4-8A0A0G2JLE6 195 aa2.36□□□□□ -2.03
CDH8-214ENST00000585315 KRTAP4-8Q9BYQ9 185 aa2.36□□□□□ -2.03
CDH8-214ENST00000585315 EPPK1P58107 5090 aaKnown RBP2.35□□□□□ -2.03
CDH8-214ENST00000585315 MT1EP04732 61 aa2.34□□□□□ -2.04
CDH8-214ENST00000585315 HERC2O95714 4834 aa2.31□□□□□ -2.04
CDH8-214ENST00000585315 MT3P25713 68 aa2.3□□□□□ -2.04
CDH8-214ENST00000585315 HSPG2P98160 4391 aa2.3□□□□□ -2.04
CDH8-214ENST00000585315 KRTAP19-2Q3LHN2 52 aa2.28□□□□□ -2.05
CDH8-214ENST00000585315 PKHD1L1Q86WI1 4243 aa2.27□□□□□ -2.05
CDH8-214ENST00000585315 HYDINQ4G0P3 5121 aa2.27□□□□□ -2.05
CDH8-214ENST00000585315 MUC17Q685J3 4493 aa2.26□□□□□ -2.05
CDH8-214ENST00000585315 MT1MQ8N339 61 aa2.25□□□□□ -2.05
CDH8-214ENST00000585315 KMT2CQ8NEZ4 4911 aaKnown RBP2.25□□□□□ -2.05
CDH8-214ENST00000585315 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
CDH8-214ENST00000585315 KRTAP4-7Q9BYR0 210 aa2.21□□□□□ -2.06
CDH8-214ENST00000585315 PRM1P04553 51 aa2.2□□□□□ -2.06
CDH8-214ENST00000585315 HERC1Q15751 4861 aa2.2□□□□□ -2.06
CDH8-214ENST00000585315 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
CDH8-214ENST00000585315 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 1109.3 ms