RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 R4GN34 69 aa5.18□□□□□ -1.58
CDH8-211ENST00000584337 KRTAP10-8P60410 259 aa5.18□□□□□ -1.58
CDH8-211ENST00000584337 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
CDH8-211ENST00000584337 VPS13DQ5THJ4 4388 aa5.13□□□□□ -1.59
CDH8-211ENST00000584337 KMT2AQ03164 3969 aa5.13□□□□□ -1.59
CDH8-211ENST00000584337 KRTAP3-3Q9BYR6 98 aa5.12□□□□□ -1.59
CDH8-211ENST00000584337 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
CDH8-211ENST00000584337 DNAH6Q9C0G6 4158 aa5.11□□□□□ -1.59
CDH8-211ENST00000584337 PKD1P98161 4303 aa5.1□□□□□ -1.59
CDH8-211ENST00000584337 DNAH8Q96JB1 4490 aa5.08□□□□□ -1.6
CDH8-211ENST00000584337 HYDINQ4G0P3 5121 aa5.06□□□□□ -1.6
CDH8-211ENST00000584337 FAT2Q9NYQ8 4349 aa5.05□□□□□ -1.6
CDH8-211ENST00000584337 DNAH11Q96DT5 4516 aa5.05□□□□□ -1.6
CDH8-211ENST00000584337 DNAH17Q9UFH2 4485 aa4.98□□□□□ -1.61
CDH8-211ENST00000584337 DNAH5Q8TE73 4624 aa4.97□□□□□ -1.61
CDH8-211ENST00000584337 KRTAP21-3Q3LHN1 58 aa4.96□□□□□ -1.62
CDH8-211ENST00000584337 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
CDH8-211ENST00000584337 SACSQ9NZJ4 4579 aa4.92□□□□□ -1.62
CDH8-211ENST00000584337 PKHD1P08F94 4074 aa4.87□□□□□ -1.63
CDH8-211ENST00000584337 A0A1B0GVY2 172 aa4.86□□□□□ -1.63
CDH8-211ENST00000584337 TNP1P09430 55 aa4.85□□□□□ -1.63
CDH8-211ENST00000584337 VPS13BQ7Z7G8 4022 aa4.84□□□□□ -1.64
CDH8-211ENST00000584337 KMT2CQ8NEZ4 4911 aaKnown RBP4.8□□□□□ -1.64
CDH8-211ENST00000584337 INE1O15225 51 aa4.78□□□□□ -1.64
CDH8-211ENST00000584337 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
CDH8-211ENST00000584337 PKHD1L1Q86WI1 4243 aa4.77□□□□□ -1.65
CDH8-211ENST00000584337 RYR2Q92736 4967 aa4.76□□□□□ -1.65
CDH8-211ENST00000584337 RYR3Q15413 4870 aa4.76□□□□□ -1.65
CDH8-211ENST00000584337 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
CDH8-211ENST00000584337 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
CDH8-211ENST00000584337 DYNC1H1Q14204 4646 aaKnown RBP4.63□□□□□ -1.67
CDH8-211ENST00000584337 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
CDH8-211ENST00000584337 KRTAP10-10P60014 251 aa4.59□□□□□ -1.68
CDH8-211ENST00000584337 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
CDH8-211ENST00000584337 LORP23490 312 aaPredicted RBP4.56□□□□□ -1.68
CDH8-211ENST00000584337 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
CDH8-211ENST00000584337 HSPG2P98160 4391 aa4.55□□□□□ -1.68
CDH8-211ENST00000584337 FAT1Q14517 4588 aa4.55□□□□□ -1.68
CDH8-211ENST00000584337 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
CDH8-211ENST00000584337 KRTAP10-4P60372 401 aaPredicted RBP4.54□□□□□ -1.68
CDH8-211ENST00000584337 TNXBP22105 4242 aa4.53□□□□□ -1.68
CDH8-211ENST00000584337 EPPK1P58107 5090 aaKnown RBP4.51□□□□□ -1.69
CDH8-211ENST00000584337 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
CDH8-211ENST00000584337 MYCBP2O75592 4640 aa4.45□□□□□ -1.7
CDH8-211ENST00000584337 RYR1P21817 5038 aa4.41□□□□□ -1.7
CDH8-211ENST00000584337 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
CDH8-211ENST00000584337 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
CDH8-211ENST00000584337 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
CDH8-211ENST00000584337 ABCA13Q86UQ4 5058 aa4.29□□□□□ -1.72
CDH8-211ENST00000584337 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
CDH8-211ENST00000584337 LPAP08519 4548 aa4.26□□□□□ -1.73
CDH8-211ENST00000584337 LCE2BO14633 110 aa4.19□□□□□ -1.74
CDH8-211ENST00000584337 HERC2O95714 4834 aa4.16□□□□□ -1.74
CDH8-211ENST00000584337 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
CDH8-211ENST00000584337 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
CDH8-211ENST00000584337 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
CDH8-211ENST00000584337 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
CDH8-211ENST00000584337 LRP2P98164 4655 aa4.09□□□□□ -1.75
CDH8-211ENST00000584337 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.76
CDH8-211ENST00000584337 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
CDH8-211ENST00000584337 BIRC6Q9NR09 4857 aa4.07□□□□□ -1.76
CDH8-211ENST00000584337 LCE2AQ5TA79 106 aaPredicted RBP4.05□□□□□ -1.76
CDH8-211ENST00000584337 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
CDH8-211ENST00000584337 HERC1Q15751 4861 aa3.99□□□□□ -1.77
CDH8-211ENST00000584337 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
CDH8-211ENST00000584337 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
CDH8-211ENST00000584337 HMCN2Q8NDA2 5059 aa3.94□□□□□ -1.78
CDH8-211ENST00000584337 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
CDH8-211ENST00000584337 MUC2Q02817 5179 aa3.9□□□□□ -1.78
CDH8-211ENST00000584337 MT1HP80294 61 aa3.85□□□□□ -1.79
CDH8-211ENST00000584337 KRTAP19-1Q8IUB9 90 aa3.84□□□□□ -1.79
CDH8-211ENST00000584337 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
CDH8-211ENST00000584337 MT2AP02795 61 aa3.82□□□□□ -1.8
CDH8-211ENST00000584337 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
CDH8-211ENST00000584337 MT1FP04733 61 aa3.79□□□□□ -1.8
CDH8-211ENST00000584337 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
CDH8-211ENST00000584337 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
CDH8-211ENST00000584337 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
CDH8-211ENST00000584337 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
CDH8-211ENST00000584337 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
CDH8-211ENST00000584337 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
CDH8-211ENST00000584337 MT1XP80297 61 aa3.68□□□□□ -1.82
CDH8-211ENST00000584337 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
CDH8-211ENST00000584337 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
CDH8-211ENST00000584337 RNF213Q63HN8 5207 aa3.67□□□□□ -1.82
CDH8-211ENST00000584337 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.83
CDH8-211ENST00000584337 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
CDH8-211ENST00000584337 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
CDH8-211ENST00000584337 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
CDH8-211ENST00000584337 KRTAP12-4P60329 112 aa3.59□□□□□ -1.84
CDH8-211ENST00000584337 MT1BP07438 61 aa3.57□□□□□ -1.84
CDH8-211ENST00000584337 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
CDH8-211ENST00000584337 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
CDH8-211ENST00000584337 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
CDH8-211ENST00000584337 KRTAP4-8Q9BYQ9 185 aa3.49□□□□□ -1.85
CDH8-211ENST00000584337 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
CDH8-211ENST00000584337 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
CDH8-211ENST00000584337 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
CDH8-211ENST00000584337 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
CDH8-211ENST00000584337 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 289 ms