RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
NDEL1-217ENST00000583683 LCA10Q71F78 164 aa9.45□□□□□ -0.9
NDEL1-217ENST00000583683 KRTAP4-1Q9BYQ7 146 aa9.42□□□□□ -0.9
NDEL1-217ENST00000583683 CDC42SE1Q9NRR8 79 aa9.4□□□□□ -0.9
NDEL1-217ENST00000583683 UBR4Q5T4S7 5183 aa9.39□□□□□ -0.91
NDEL1-217ENST00000583683 A6NED7 52 aa9.38□□□□□ -0.91
NDEL1-217ENST00000583683 HRES1P13985 223 aa9.38□□□□□ -0.91
NDEL1-217ENST00000583683 KTN1-AS1Q86SY8 53 aa9.36□□□□□ -0.91
NDEL1-217ENST00000583683 A6NN06 94 aa9.35□□□□□ -0.91
NDEL1-217ENST00000583683 MUC2Q02817 5179 aa9.34□□□□□ -0.91
NDEL1-217ENST00000583683 SPTSSBQ8NFR3 76 aa9.3□□□□□ -0.92
NDEL1-217ENST00000583683 RNF213Q63HN8 5207 aa9.2□□□□□ -0.94
NDEL1-217ENST00000583683 ACYP2P14621 99 aa9.18□□□□□ -0.94
NDEL1-217ENST00000583683 RBM12B-AS1Q9P1G2 102 aa9.18□□□□□ -0.94
NDEL1-217ENST00000583683 COX6B2Q6YFQ2 88 aa9.17□□□□□ -0.94
NDEL1-217ENST00000583683 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
NDEL1-217ENST00000583683 KRTAP3-1Q9BYR8 98 aa9.15□□□□□ -0.95
NDEL1-217ENST00000583683 KRTAP19-2Q3LHN2 52 aa9.14□□□□□ -0.95
NDEL1-217ENST00000583683 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
NDEL1-217ENST00000583683 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
NDEL1-217ENST00000583683 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
NDEL1-217ENST00000583683 FAT4Q6V0I7 4981 aa8.98□□□□□ -0.97
NDEL1-217ENST00000583683 A0A1B0GU69 56 aa8.98□□□□□ -0.97
NDEL1-217ENST00000583683 S4R3F8 94 aa8.89□□□□□ -0.99
NDEL1-217ENST00000583683 UQCR11O14957 56 aa8.87□□□□□ -0.99
NDEL1-217ENST00000583683 FLGP20930 4061 aaPredicted RBP8.87□□□□□ -0.99
NDEL1-217ENST00000583683 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
NDEL1-217ENST00000583683 MT1HP80294 61 aa8.85□□□□□ -0.99
NDEL1-217ENST00000583683 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
NDEL1-217ENST00000583683 PRAC1Q96KF2 57 aa8.82□□□□□ -1
NDEL1-217ENST00000583683 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
NDEL1-217ENST00000583683 M0R2T5 61 aa8.72□□□□□ -1.01
NDEL1-217ENST00000583683 CSAG1Q6PB30 78 aa8.72□□□□□ -1.01
NDEL1-217ENST00000583683 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
NDEL1-217ENST00000583683 LINC01554Q52M75 96 aa8.68□□□□□ -1.02
NDEL1-217ENST00000583683 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
NDEL1-217ENST00000583683 H0YAA0 97 aa8.53□□□□□ -1.04
NDEL1-217ENST00000583683 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
NDEL1-217ENST00000583683 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
NDEL1-217ENST00000583683 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
NDEL1-217ENST00000583683 A0A1B0GU33 70 aa8.44□□□□□ -1.06
NDEL1-217ENST00000583683 MT2AP02795 61 aa8.43□□□□□ -1.06
NDEL1-217ENST00000583683 P0C880 135 aa8.4□□□□□ -1.06
NDEL1-217ENST00000583683 MT1FP04733 61 aa8.38□□□□□ -1.07
NDEL1-217ENST00000583683 KRTAP25-1Q3LHN0 102 aa8.37□□□□□ -1.07
NDEL1-217ENST00000583683 KRTAP10-10P60014 251 aa8.34□□□□□ -1.07
NDEL1-217ENST00000583683 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
NDEL1-217ENST00000583683 K7ERS5 55 aa8.22□□□□□ -1.09
NDEL1-217ENST00000583683 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
NDEL1-217ENST00000583683 R4GN34 69 aa8.19□□□□□ -1.1
NDEL1-217ENST00000583683 M0QZ58 72 aa8.16□□□□□ -1.1
NDEL1-217ENST00000583683 KRTAP13-4Q3LI77 160 aa8.15□□□□□ -1.1
NDEL1-217ENST00000583683 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
NDEL1-217ENST00000583683 ROMO1P60602 79 aa8.15□□□□□ -1.11
NDEL1-217ENST00000583683 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.11
NDEL1-217ENST00000583683 H3BS24 57 aa8.13□□□□□ -1.11
NDEL1-217ENST00000583683 LCE2BO14633 110 aa8.01□□□□□ -1.13
NDEL1-217ENST00000583683 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
NDEL1-217ENST00000583683 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.13
NDEL1-217ENST00000583683 A0A0D9SG42 100 aa7.96□□□□□ -1.14
NDEL1-217ENST00000583683 MT1BP07438 61 aa7.89□□□□□ -1.15
NDEL1-217ENST00000583683 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
NDEL1-217ENST00000583683 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
NDEL1-217ENST00000583683 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
NDEL1-217ENST00000583683 USH2AO75445 5202 aa7.79□□□□□ -1.16
NDEL1-217ENST00000583683 SPINT4Q6UDR6 99 aa7.78□□□□□ -1.16
NDEL1-217ENST00000583683 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
NDEL1-217ENST00000583683 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
NDEL1-217ENST00000583683 KRTAP15-1Q3LI76 137 aa7.71□□□□□ -1.17
NDEL1-217ENST00000583683 FSIP2Q5CZC0 6907 aa7.71□□□□□ -1.18
NDEL1-217ENST00000583683 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
NDEL1-217ENST00000583683 SSPOA2VEC9 5147 aa7.61□□□□□ -1.19
NDEL1-217ENST00000583683 MT1XP80297 61 aa7.57□□□□□ -1.2
NDEL1-217ENST00000583683 KRTAP19-6Q3LI70 58 aa7.57□□□□□ -1.2
NDEL1-217ENST00000583683 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
NDEL1-217ENST00000583683 PRO2289Q9P1D8 64 aa7.5□□□□□ -1.21
NDEL1-217ENST00000583683 CRCT1Q9UGL9 99 aa7.49□□□□□ -1.21
NDEL1-217ENST00000583683 NDUFAF8A1L188 74 aa7.48□□□□□ -1.21
NDEL1-217ENST00000583683 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
NDEL1-217ENST00000583683 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
NDEL1-217ENST00000583683 KRTAP10-7P60409 375 aaPredicted RBP7.26□□□□□ -1.25
NDEL1-217ENST00000583683 TNP1P09430 55 aa7.22□□□□□ -1.25
NDEL1-217ENST00000583683 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
NDEL1-217ENST00000583683 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
NDEL1-217ENST00000583683 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
NDEL1-217ENST00000583683 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
NDEL1-217ENST00000583683 KMT2DO14686 5537 aa7.04□□□□□ -1.28
NDEL1-217ENST00000583683 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
NDEL1-217ENST00000583683 LCE3AQ5TA76 89 aa6.98□□□□□ -1.29
NDEL1-217ENST00000583683 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
NDEL1-217ENST00000583683 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
NDEL1-217ENST00000583683 KRTAP8-1Q8IUC2 63 aa6.9□□□□□ -1.31
NDEL1-217ENST00000583683 LUZP6Q538Z0 58 aa6.89□□□□□ -1.31
NDEL1-217ENST00000583683 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
NDEL1-217ENST00000583683 SYNE2Q8WXH0 6885 aaKnown RBP6.8□□□□□ -1.32
NDEL1-217ENST00000583683 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
NDEL1-217ENST00000583683 KRTAP19-7Q3SYF9 63 aa6.76□□□□□ -1.33
NDEL1-217ENST00000583683 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
NDEL1-217ENST00000583683 KRTAP5-9P26371 169 aa6.72□□□□□ -1.33
NDEL1-217ENST00000583683 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms