RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 NDUFC1O43677 76 aa7.26□□□□□ -1.25
SREBF1-221ENST00000583080 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
SREBF1-221ENST00000583080 KRTAP19-8Q3LI54 63 aa7.26□□□□□ -1.25
SREBF1-221ENST00000583080 C7orf65Q6ZTY9 151 aa7.26□□□□□ -1.25
SREBF1-221ENST00000583080 C5orf47Q569G3 176 aa7.25□□□□□ -1.25
SREBF1-221ENST00000583080 Q5W150 140 aa7.25□□□□□ -1.25
SREBF1-221ENST00000583080 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
SREBF1-221ENST00000583080 hDV103S1A0JD37 113 aa7.24□□□□□ -1.25
SREBF1-221ENST00000583080 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
SREBF1-221ENST00000583080 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
SREBF1-221ENST00000583080 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
SREBF1-221ENST00000583080 K7EQZ3 153 aa7.22□□□□□ -1.25
SREBF1-221ENST00000583080 C4orf26Q17RF5 130 aa7.22□□□□□ -1.25
SREBF1-221ENST00000583080 NREPQ16612 68 aa7.2□□□□□ -1.26
SREBF1-221ENST00000583080 KLKP1Q107X0 134 aa7.19□□□□□ -1.26
SREBF1-221ENST00000583080 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
SREBF1-221ENST00000583080 S4R3F8 94 aa7.12□□□□□ -1.27
SREBF1-221ENST00000583080 KRTAP2-3P0C7H8 128 aa7.1□□□□□ -1.27
SREBF1-221ENST00000583080 KRTAP2-4Q9BYR9 128 aa7.1□□□□□ -1.27
SREBF1-221ENST00000583080 A0A087WVE0 104 aa7.09□□□□□ -1.27
SREBF1-221ENST00000583080 HCG22E2RYF7 251 aa7.09□□□□□ -1.27
SREBF1-221ENST00000583080 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
SREBF1-221ENST00000583080 LCA10Q71F78 164 aa7.09□□□□□ -1.27
SREBF1-221ENST00000583080 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
SREBF1-221ENST00000583080 Q8N9L7 120 aa7.06□□□□□ -1.28
SREBF1-221ENST00000583080 BPY2O14599 106 aa7.05□□□□□ -1.28
SREBF1-221ENST00000583080 CASC2Q6XLA1 102 aa7.05□□□□□ -1.28
SREBF1-221ENST00000583080 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
SREBF1-221ENST00000583080 H7BZZ5 65 aa7.02□□□□□ -1.29
SREBF1-221ENST00000583080 C1orf64Q8NEQ6 169 aa7.01□□□□□ -1.29
SREBF1-221ENST00000583080 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
SREBF1-221ENST00000583080 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
SREBF1-221ENST00000583080 SPRR2EP22531 72 aa6.98□□□□□ -1.29
SREBF1-221ENST00000583080 SPRR2BP35325 72 aa6.98□□□□□ -1.29
SREBF1-221ENST00000583080 SPRR2AP35326 72 aa6.98□□□□□ -1.29
SREBF1-221ENST00000583080 OCR1Q9BZK8 76 aa6.97□□□□□ -1.29
SREBF1-221ENST00000583080 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
SREBF1-221ENST00000583080 H3BPC8 53 aa6.94□□□□□ -1.3
SREBF1-221ENST00000583080 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
SREBF1-221ENST00000583080 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
SREBF1-221ENST00000583080 KRTAP2-2Q9BYT5 123 aa6.85□□□□□ -1.31
SREBF1-221ENST00000583080 KRTAP2-1Q9BYU5 128 aa6.85□□□□□ -1.31
SREBF1-221ENST00000583080 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
SREBF1-221ENST00000583080 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
SREBF1-221ENST00000583080 MP68P56378 58 aa6.82□□□□□ -1.32
SREBF1-221ENST00000583080 MT1XP80297 61 aa6.82□□□□□ -1.32
SREBF1-221ENST00000583080 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
SREBF1-221ENST00000583080 V9GYY9 64 aa6.82□□□□□ -1.32
SREBF1-221ENST00000583080 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
SREBF1-221ENST00000583080 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
SREBF1-221ENST00000583080 SNURFQ9Y675 71 aa6.81□□□□□ -1.32
SREBF1-221ENST00000583080 TP53AIP1Q9HCN2 124 aa6.76□□□□□ -1.33
SREBF1-221ENST00000583080 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
SREBF1-221ENST00000583080 SPRR2DP22532 72 aa6.75□□□□□ -1.33
SREBF1-221ENST00000583080 Q1T7F1 81 aa6.74□□□□□ -1.33
SREBF1-221ENST00000583080 TRAV22A0A0B4J277 110 aa6.69□□□□□ -1.34
SREBF1-221ENST00000583080 A8MUN3 132 aa6.69□□□□□ -1.34
SREBF1-221ENST00000583080 H0YAA0 97 aa6.69□□□□□ -1.34
SREBF1-221ENST00000583080 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
SREBF1-221ENST00000583080 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
SREBF1-221ENST00000583080 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
SREBF1-221ENST00000583080 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.34
SREBF1-221ENST00000583080 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
SREBF1-221ENST00000583080 H0Y9P7 68 aa6.61□□□□□ -1.35
SREBF1-221ENST00000583080 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
SREBF1-221ENST00000583080 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
SREBF1-221ENST00000583080 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
SREBF1-221ENST00000583080 GPR98Q8WXG9 6306 aa6.52□□□□□ -1.37
SREBF1-221ENST00000583080 BRK1Q8WUW1 75 aa6.51□□□□□ -1.37
SREBF1-221ENST00000583080 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
SREBF1-221ENST00000583080 R4GN34 69 aa6.49□□□□□ -1.37
SREBF1-221ENST00000583080 P0C880 135 aa6.47□□□□□ -1.37
SREBF1-221ENST00000583080 M0QZ58 72 aa6.45□□□□□ -1.38
SREBF1-221ENST00000583080 KRTAP10-12P60413 245 aa6.44□□□□□ -1.38
SREBF1-221ENST00000583080 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
SREBF1-221ENST00000583080 COA5Q86WW8 74 aa6.41□□□□□ -1.38
SREBF1-221ENST00000583080 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
SREBF1-221ENST00000583080 ACYP2P14621 99 aa6.36□□□□□ -1.39
SREBF1-221ENST00000583080 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
SREBF1-221ENST00000583080 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
SREBF1-221ENST00000583080 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
SREBF1-221ENST00000583080 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
SREBF1-221ENST00000583080 PSPHP1O15172 72 aa6.32□□□□□ -1.4
SREBF1-221ENST00000583080 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
SREBF1-221ENST00000583080 DMAC1Q96GE9 116 aa6.31□□□□□ -1.4
SREBF1-221ENST00000583080 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
SREBF1-221ENST00000583080 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
SREBF1-221ENST00000583080 A6NED7 52 aa6.26□□□□□ -1.41
SREBF1-221ENST00000583080 KTN1-AS1Q86SY8 53 aa6.22□□□□□ -1.41
SREBF1-221ENST00000583080 SPTSSBQ8NFR3 76 aa6.18□□□□□ -1.42
SREBF1-221ENST00000583080 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
SREBF1-221ENST00000583080 A0A1B0GU69 56 aa6.11□□□□□ -1.43
SREBF1-221ENST00000583080 SEC61GP60059 68 aa6.11□□□□□ -1.43
SREBF1-221ENST00000583080 UQCR11O14957 56 aa6.1□□□□□ -1.43
SREBF1-221ENST00000583080 KRTAP19-7Q3SYF9 63 aa6.09□□□□□ -1.43
SREBF1-221ENST00000583080 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
SREBF1-221ENST00000583080 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
SREBF1-221ENST00000583080 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
SREBF1-221ENST00000583080 MT1EP04732 61 aa6.06□□□□□ -1.44
SREBF1-221ENST00000583080 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms