RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	KRTAP5-9	P26371	169 aa		5.06	□□□□□ -1.6
CDK5RAP3-223	ENST00000582114	CYP4F30P	Q9H0H9	118 aa		5.05	□□□□□ -1.6
CDK5RAP3-223	ENST00000582114		K7EP34	96 aa		5.04	□□□□□ -1.6
CDK5RAP3-223	ENST00000582114	KMT2D	O14686	5537 aa		5.04	□□□□□ -1.6
CDK5RAP3-223	ENST00000582114	MDN1	Q9NU22	5596 aa		5.03	□□□□□ -1.6
CDK5RAP3-223	ENST00000582114	COL5A1-AS1	Q5SY13	56 aa		5.02	□□□□□ -1.61
CDK5RAP3-223	ENST00000582114	CRIPT	Q9P021	101 aa		5.01	□□□□□ -1.61
CDK5RAP3-223	ENST00000582114	TRAV22	A0A0B4J277	110 aa		5	□□□□□ -1.61
CDK5RAP3-223	ENST00000582114	PCP4L1	A6NKN8	68 aa		4.98	□□□□□ -1.61
CDK5RAP3-223	ENST00000582114	LOC101927531	A0A1B0GV80	90 aa		4.97	□□□□□ -1.61
CDK5RAP3-223	ENST00000582114	ETDB	Q3ZM63	59 aa		4.96	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	NDUFC1	O43677	76 aa		4.95	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	ADM2	Q7Z4H4	148 aa		4.94	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	SPRR2F	Q96RM1	72 aa		4.94	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	GTF2H5	Q6ZYL4	71 aa		4.93	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114		H0YAA0	97 aa		4.92	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114		A8MUN3	132 aa		4.91	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114		F8W1H4	67 aa		4.91	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114		H0Y9P7	68 aa		4.91	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	KRTAP2-3	P0C7H8	128 aa		4.91	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	SPRR2E	P22531	72 aa		4.91	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	SPRR2B	P35325	72 aa		4.91	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	SPRR2A	P35326	72 aa		4.91	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	KRTAP2-4	Q9BYR9	128 aa		4.91	□□□□□ -1.62
CDK5RAP3-223	ENST00000582114	SEC61G	P60059	68 aa		4.89	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	HIST1H4A	P62805	103 aa	Known RBP	4.89	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	MT1X	P80297	61 aa		4.89	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	PRO2289	Q9P1D8	64 aa		4.89	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	UQCRQ	O14949	82 aa		4.88	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	ACYP1	P07311	99 aa		4.88	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	ATOX1	O00244	68 aa		4.86	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	KRTAP8-1	Q8IUC2	63 aa		4.85	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	PLAC4	Q8WY50	150 aa		4.85	□□□□□ -1.63
CDK5RAP3-223	ENST00000582114	ATP5EP2	Q5VTU8	51 aa		4.82	□□□□□ -1.64
CDK5RAP3-223	ENST00000582114	LINC00208	Q96KT6	92 aa		4.82	□□□□□ -1.64
CDK5RAP3-223	ENST00000582114		R4GN34	69 aa		4.81	□□□□□ -1.64
CDK5RAP3-223	ENST00000582114		P0C880	135 aa		4.8	□□□□□ -1.64
CDK5RAP3-223	ENST00000582114	SCGB1A1	P11684	91 aa		4.8	□□□□□ -1.64
CDK5RAP3-223	ENST00000582114	LCE1A	Q5T7P2	110 aa		4.79	□□□□□ -1.64
CDK5RAP3-223	ENST00000582114		M0QZ58	72 aa		4.78	□□□□□ -1.64
CDK5RAP3-223	ENST00000582114	KRTAP4-8	A0A0G2JLE6	195 aa		4.77	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	FAM240A	A0A1B0GVK7	77 aa		4.77	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	KRTAP4-8	Q9BYQ9	185 aa		4.77	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	KRTAP12-2	P59991	146 aa		4.76	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	LINC01554	Q52M75	96 aa		4.76	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114		A0A1B0GV90	55 aa		4.74	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	SPRR2D	P22532	72 aa		4.74	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	MP68	P56378	58 aa		4.74	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	KRTAP2-2	Q9BYT5	123 aa		4.74	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	KRTAP2-1	Q9BYU5	128 aa		4.74	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	C20orf197	Q8N268	126 aa		4.73	□□□□□ -1.65
CDK5RAP3-223	ENST00000582114	OCR1	Q9BZK8	76 aa		4.71	□□□□□ -1.66
CDK5RAP3-223	ENST00000582114	LINC00643	Q86TS7	51 aa		4.7	□□□□□ -1.66
CDK5RAP3-223	ENST00000582114	KRTAP10-7	P60409	375 aa	Predicted RBP	4.69	□□□□□ -1.66
CDK5RAP3-223	ENST00000582114		V9GYY9	64 aa		4.67	□□□□□ -1.66
CDK5RAP3-223	ENST00000582114	DMAC1	Q96GE9	116 aa		4.66	□□□□□ -1.66
CDK5RAP3-223	ENST00000582114	LCE3B	Q5TA77	95 aa		4.62	□□□□□ -1.67
CDK5RAP3-223	ENST00000582114		H3BPC8	53 aa		4.61	□□□□□ -1.67
CDK5RAP3-223	ENST00000582114	KRTAP10-12	P60413	245 aa		4.61	□□□□□ -1.67
CDK5RAP3-223	ENST00000582114	MT-ATP8	P03928	68 aa		4.59	□□□□□ -1.67
CDK5RAP3-223	ENST00000582114	TRAV7	A0A075B6U4	112 aa		4.54	□□□□□ -1.68
CDK5RAP3-223	ENST00000582114		K7ERU9	68 aa		4.53	□□□□□ -1.68
CDK5RAP3-223	ENST00000582114	ACYP2	P14621	99 aa		4.52	□□□□□ -1.69
CDK5RAP3-223	ENST00000582114	SMIM20	Q8N5G0	67 aa		4.52	□□□□□ -1.69
CDK5RAP3-223	ENST00000582114	KRTAP23-1	A1A580	65 aa		4.51	□□□□□ -1.69
CDK5RAP3-223	ENST00000582114	PRO0628	Q9UI54	55 aa		4.5	□□□□□ -1.69
CDK5RAP3-223	ENST00000582114	SPTSSB	Q8NFR3	76 aa		4.49	□□□□□ -1.69
CDK5RAP3-223	ENST00000582114		A0A0A0MQY5	61 aa		4.47	□□□□□ -1.69
CDK5RAP3-223	ENST00000582114	CHKB-CPT1B	H3BT56	60 aa		4.46	□□□□□ -1.7
CDK5RAP3-223	ENST00000582114		J3QR89	54 aa		4.44	□□□□□ -1.7
CDK5RAP3-223	ENST00000582114	RPS28	P62857	69 aa	Known RBP	4.44	□□□□□ -1.7
CDK5RAP3-223	ENST00000582114	KRTAP13-4	Q3LI77	160 aa		4.42	□□□□□ -1.7
CDK5RAP3-223	ENST00000582114	CAMK2N1	Q7Z7J9	78 aa		4.4	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	DST	Q03001	7570 aa	Known RBP	4.4	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	KRTAP9-9	Q9BYP9	154 aa		4.39	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	KRTAP9-4	Q9BYQ2	154 aa		4.39	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	KRTAP4-9	Q9BYQ8	210 aa		4.38	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	KRTAP19-7	Q3SYF9	63 aa		4.37	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	SNURF	Q9Y675	71 aa		4.37	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	LCE5A	Q5TCM9	118 aa		4.36	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	MT1E	P04732	61 aa		4.35	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	KRTAP4-7	Q9BYR0	210 aa		4.35	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	GPR98	Q8WXG9	6306 aa		4.34	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114	KRTAP19-3	Q7Z4W3	81 aa		4.34	□□□□□ -1.71
CDK5RAP3-223	ENST00000582114		A0A0D9SG42	100 aa		4.3	□□□□□ -1.72
CDK5RAP3-223	ENST00000582114	PMAIP1	Q13794	54 aa		4.28	□□□□□ -1.72
CDK5RAP3-223	ENST00000582114	CYSTM1	Q9H1C7	97 aa		4.26	□□□□□ -1.73
CDK5RAP3-223	ENST00000582114	SPANXA2-OT1	Q8N9U9	137 aa		4.25	□□□□□ -1.73
CDK5RAP3-223	ENST00000582114	KRTAP4-12	Q9BQ66	201 aa		4.25	□□□□□ -1.73
CDK5RAP3-223	ENST00000582114	KRTAP19-5	Q3LI72	72 aa		4.24	□□□□□ -1.73
CDK5RAP3-223	ENST00000582114	ANAPC13	Q9BS18	74 aa		4.24	□□□□□ -1.73
CDK5RAP3-223	ENST00000582114	LCE1D	Q5T752	114 aa		4.23	□□□□□ -1.73
CDK5RAP3-223	ENST00000582114	SPATA8	Q6RVD6	105 aa		4.23	□□□□□ -1.73
CDK5RAP3-223	ENST00000582114	SPINT4	Q6UDR6	99 aa		4.23	□□□□□ -1.73
CDK5RAP3-223	ENST00000582114	COA5	Q86WW8	74 aa		4.21	□□□□□ -1.74
CDK5RAP3-223	ENST00000582114	MT4	P47944	62 aa		4.19	□□□□□ -1.74
CDK5RAP3-223	ENST00000582114	SERP1	Q9Y6X1	66 aa		4.19	□□□□□ -1.74
CDK5RAP3-223	ENST00000582114	MT1G	P13640	62 aa		4.18	□□□□□ -1.74
CDK5RAP3-223	ENST00000582114	KRTAP5-3	Q6L8H2	238 aa		4.18	□□□□□ -1.74
CDK5RAP3-223	ENST00000582114	KRTAP4-2	Q9BYR5	136 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms