RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 ATP11AUNQ6ZP68 121 aa5.5□□□□□ -1.53
TOP3A-210ENST00000580713 Q75L30 129 aa5.5□□□□□ -1.53
TOP3A-210ENST00000580713 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
TOP3A-210ENST00000580713 SMIM20Q8N5G0 67 aa5.49□□□□□ -1.53
TOP3A-210ENST00000580713 OCR1Q9BZK8 76 aa5.49□□□□□ -1.53
TOP3A-210ENST00000580713 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
TOP3A-210ENST00000580713 UQCRQO14949 82 aa5.47□□□□□ -1.53
TOP3A-210ENST00000580713 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
TOP3A-210ENST00000580713 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
TOP3A-210ENST00000580713 MT1FP04733 61 aa5.46□□□□□ -1.54
TOP3A-210ENST00000580713 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.54
TOP3A-210ENST00000580713 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
TOP3A-210ENST00000580713 Q5W150 140 aa5.43□□□□□ -1.54
TOP3A-210ENST00000580713 SERP2Q8N6R1 65 aa5.43□□□□□ -1.54
TOP3A-210ENST00000580713 ANAPC13Q9BS18 74 aa5.43□□□□□ -1.54
TOP3A-210ENST00000580713 TRAV22A0A0B4J277 110 aa5.42□□□□□ -1.54
TOP3A-210ENST00000580713 H0Y9P7 68 aa5.42□□□□□ -1.54
TOP3A-210ENST00000580713 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
TOP3A-210ENST00000580713 C5orf47Q569G3 176 aa5.41□□□□□ -1.54
TOP3A-210ENST00000580713 MP68P56378 58 aa5.4□□□□□ -1.54
TOP3A-210ENST00000580713 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
TOP3A-210ENST00000580713 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
TOP3A-210ENST00000580713 COX7CP15954 63 aa5.39□□□□□ -1.55
TOP3A-210ENST00000580713 H3BPC8 53 aa5.37□□□□□ -1.55
TOP3A-210ENST00000580713 LINC00208Q96KT6 92 aa5.36□□□□□ -1.55
TOP3A-210ENST00000580713 LOC101927531A0A1B0GV80 90 aa5.35□□□□□ -1.55
TOP3A-210ENST00000580713 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
TOP3A-210ENST00000580713 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
TOP3A-210ENST00000580713 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
TOP3A-210ENST00000580713 C20orf197Q8N268 126 aa5.34□□□□□ -1.55
TOP3A-210ENST00000580713 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
TOP3A-210ENST00000580713 SNURFQ9Y675 71 aa5.32□□□□□ -1.56
TOP3A-210ENST00000580713 NEBP20929 6669 aa5.32□□□□□ -1.56
TOP3A-210ENST00000580713 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
TOP3A-210ENST00000580713 SPINK7P58062 85 aa5.31□□□□□ -1.56
TOP3A-210ENST00000580713 CYP4F30PQ9H0H9 118 aa5.31□□□□□ -1.56
TOP3A-210ENST00000580713 KLKP1Q107X0 134 aa5.3□□□□□ -1.56
TOP3A-210ENST00000580713 KRTAP20-1Q3LI63 56 aa5.3□□□□□ -1.56
TOP3A-210ENST00000580713 RBM12B-AS1Q9P1G2 102 aa5.28□□□□□ -1.56
TOP3A-210ENST00000580713 NDUFC1O43677 76 aa5.24□□□□□ -1.57
TOP3A-210ENST00000580713 HRES1P13985 223 aa5.23□□□□□ -1.57
TOP3A-210ENST00000580713 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
TOP3A-210ENST00000580713 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
TOP3A-210ENST00000580713 H7BZZ5 65 aa5.2□□□□□ -1.58
TOP3A-210ENST00000580713 C4orf26Q17RF5 130 aa5.2□□□□□ -1.58
TOP3A-210ENST00000580713 SPANXA2-OT1Q8N9U9 137 aa5.17□□□□□ -1.58
TOP3A-210ENST00000580713 TMEM258P61165 79 aa5.13□□□□□ -1.59
TOP3A-210ENST00000580713 A8MUN3 132 aa5.12□□□□□ -1.59
TOP3A-210ENST00000580713 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
TOP3A-210ENST00000580713 ATP5EP56381 51 aaPredicted RBP5.11□□□□□ -1.59
TOP3A-210ENST00000580713 ACYP2P14621 99 aa5.08□□□□□ -1.6
TOP3A-210ENST00000580713 H1FX-AS1Q4G0G2 97 aa5.08□□□□□ -1.6
TOP3A-210ENST00000580713 A6NN06 94 aa5.06□□□□□ -1.6
TOP3A-210ENST00000580713 MDN1Q9NU22 5596 aa5.06□□□□□ -1.6
TOP3A-210ENST00000580713 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
TOP3A-210ENST00000580713 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
TOP3A-210ENST00000580713 S4R3F8 94 aa5.02□□□□□ -1.61
TOP3A-210ENST00000580713 COA5Q86WW8 74 aa5.01□□□□□ -1.61
TOP3A-210ENST00000580713 CHKB-CPT1BH3BT56 60 aa5□□□□□ -1.61
TOP3A-210ENST00000580713 KMT2DO14686 5537 aa5□□□□□ -1.61
TOP3A-210ENST00000580713 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
TOP3A-210ENST00000580713 LCA10Q71F78 164 aa4.98□□□□□ -1.61
TOP3A-210ENST00000580713 SERP1Q9Y6X1 66 aa4.97□□□□□ -1.61
TOP3A-210ENST00000580713 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
TOP3A-210ENST00000580713 SPTSSBQ8NFR3 76 aa4.94□□□□□ -1.62
TOP3A-210ENST00000580713 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
TOP3A-210ENST00000580713 Q5VV11 94 aa4.89□□□□□ -1.63
TOP3A-210ENST00000580713 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
TOP3A-210ENST00000580713 MT1BP07438 61 aa4.87□□□□□ -1.63
TOP3A-210ENST00000580713 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
TOP3A-210ENST00000580713 SPRR2EP22531 72 aa4.84□□□□□ -1.63
TOP3A-210ENST00000580713 SPRR2BP35325 72 aa4.84□□□□□ -1.63
TOP3A-210ENST00000580713 SPRR2AP35326 72 aa4.84□□□□□ -1.63
TOP3A-210ENST00000580713 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
TOP3A-210ENST00000580713 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
TOP3A-210ENST00000580713 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
TOP3A-210ENST00000580713 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
TOP3A-210ENST00000580713 H0YAA0 97 aa4.79□□□□□ -1.64
TOP3A-210ENST00000580713 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
TOP3A-210ENST00000580713 SEC61GP60059 68 aa4.77□□□□□ -1.65
TOP3A-210ENST00000580713 ADM2Q7Z4H4 148 aa4.77□□□□□ -1.65
TOP3A-210ENST00000580713 LINC01558Q9Y6Z2 57 aa4.77□□□□□ -1.65
TOP3A-210ENST00000580713 V9GYY9 64 aa4.77□□□□□ -1.65
TOP3A-210ENST00000580713 Q1T7F1 81 aa4.75□□□□□ -1.65
TOP3A-210ENST00000580713 A0A1B0GU69 56 aa4.74□□□□□ -1.65
TOP3A-210ENST00000580713 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
TOP3A-210ENST00000580713 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
TOP3A-210ENST00000580713 P0C880 135 aa4.71□□□□□ -1.66
TOP3A-210ENST00000580713 SPRR2DP22532 72 aa4.68□□□□□ -1.66
TOP3A-210ENST00000580713 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
TOP3A-210ENST00000580713 PSPHP1O15172 72 aa4.67□□□□□ -1.66
TOP3A-210ENST00000580713 MT3P25713 68 aa4.67□□□□□ -1.66
TOP3A-210ENST00000580713 A0A1B0GU33 70 aa4.64□□□□□ -1.67
TOP3A-210ENST00000580713 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
TOP3A-210ENST00000580713 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
TOP3A-210ENST00000580713 R4GN34 69 aa4.62□□□□□ -1.67
TOP3A-210ENST00000580713 M0QZ58 72 aa4.6□□□□□ -1.67
TOP3A-210ENST00000580713 UQCR11O14957 56 aa4.58□□□□□ -1.68
TOP3A-210ENST00000580713 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
TOP3A-210ENST00000580713 SPATA8Q6RVD6 105 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms