RNA–Protein interactions for RNA: ENST00000580086.1

MSL1-207, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 2,638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-207ENST00000580086 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
MSL1-207ENST00000580086 DNAH2Q9P225 4427 aa3.98□□□□□ -1.77
MSL1-207ENST00000580086 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
MSL1-207ENST00000580086 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
MSL1-207ENST00000580086 KMT2AQ03164 3969 aa3.94□□□□□ -1.78
MSL1-207ENST00000580086 DMBT1Q9UGM3 2413 aaPredicted RBP3.9□□□□□ -1.79
MSL1-207ENST00000580086 SACSQ9NZJ4 4579 aa3.89□□□□□ -1.79
MSL1-207ENST00000580086 DNAH5Q8TE73 4624 aa3.88□□□□□ -1.79
MSL1-207ENST00000580086 M0QZ58 72 aa3.88□□□□□ -1.79
MSL1-207ENST00000580086 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
MSL1-207ENST00000580086 DNHD1Q96M86 4753 aa3.86□□□□□ -1.79
MSL1-207ENST00000580086 MGAM2Q2M2H8 2515 aa3.86□□□□□ -1.79
MSL1-207ENST00000580086 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
MSL1-207ENST00000580086 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
MSL1-207ENST00000580086 KRTAP10-2P60368 255 aa3.84□□□□□ -1.8
MSL1-207ENST00000580086 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
MSL1-207ENST00000580086 BIRC6Q9NR09 4857 aa3.81□□□□□ -1.8
MSL1-207ENST00000580086 STARD9Q9P2P6 4700 aa3.8□□□□□ -1.8
MSL1-207ENST00000580086 STAB1Q9NY15 2570 aa3.8□□□□□ -1.8
MSL1-207ENST00000580086 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.8
MSL1-207ENST00000580086 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
MSL1-207ENST00000580086 PKHD1L1Q86WI1 4243 aa3.78□□□□□ -1.8
MSL1-207ENST00000580086 VPS13BQ7Z7G8 4022 aa3.77□□□□□ -1.81
MSL1-207ENST00000580086 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
MSL1-207ENST00000580086 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
MSL1-207ENST00000580086 MYCBP2O75592 4640 aa3.75□□□□□ -1.81
MSL1-207ENST00000580086 APOBP04114 4563 aaKnown RBP3.71□□□□□ -1.81
MSL1-207ENST00000580086 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
MSL1-207ENST00000580086 PKD1P98161 4303 aa3.69□□□□□ -1.82
MSL1-207ENST00000580086 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
MSL1-207ENST00000580086 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
MSL1-207ENST00000580086 PKHD1P08F94 4074 aa3.66□□□□□ -1.82
MSL1-207ENST00000580086 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
MSL1-207ENST00000580086 R4GN34 69 aa3.63□□□□□ -1.83
MSL1-207ENST00000580086 RYR3Q15413 4870 aa3.63□□□□□ -1.83
MSL1-207ENST00000580086 INE1O15225 51 aa3.63□□□□□ -1.83
MSL1-207ENST00000580086 FAT3Q8TDW7 4589 aa3.61□□□□□ -1.83
MSL1-207ENST00000580086 TNXBP22105 4242 aa3.61□□□□□ -1.83
MSL1-207ENST00000580086 HERC2O95714 4834 aa3.6□□□□□ -1.83
MSL1-207ENST00000580086 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
MSL1-207ENST00000580086 KIAA1109Q2LD37 5005 aa3.56□□□□□ -1.84
MSL1-207ENST00000580086 HSPG2P98160 4391 aa3.55□□□□□ -1.84
MSL1-207ENST00000580086 KRTAP10-4P60372 401 aaPredicted RBP3.55□□□□□ -1.84
MSL1-207ENST00000580086 SMR3BP02814 79 aaPredicted RBP3.54□□□□□ -1.84
MSL1-207ENST00000580086 FAT1Q14517 4588 aa3.52□□□□□ -1.85
MSL1-207ENST00000580086 KRTAP9-2Q9BYQ4 174 aa3.52□□□□□ -1.85
MSL1-207ENST00000580086 RYR2Q92736 4967 aa3.52□□□□□ -1.85
MSL1-207ENST00000580086 A0A1B0GVY2 172 aa3.49□□□□□ -1.85
MSL1-207ENST00000580086 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
MSL1-207ENST00000580086 TNP1P09430 55 aa3.46□□□□□ -1.86
MSL1-207ENST00000580086 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
MSL1-207ENST00000580086 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
MSL1-207ENST00000580086 Q5VSD8 79 aa3.43□□□□□ -1.86
MSL1-207ENST00000580086 HYDINQ4G0P3 5121 aa3.43□□□□□ -1.86
MSL1-207ENST00000580086 RYR1P21817 5038 aa3.39□□□□□ -1.87
MSL1-207ENST00000580086 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
MSL1-207ENST00000580086 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
MSL1-207ENST00000580086 EPPK1P58107 5090 aaKnown RBP3.34□□□□□ -1.87
MSL1-207ENST00000580086 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
MSL1-207ENST00000580086 LPAP08519 4548 aa3.33□□□□□ -1.88
MSL1-207ENST00000580086 KMT2CQ8NEZ4 4911 aaKnown RBP3.33□□□□□ -1.88
MSL1-207ENST00000580086 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
MSL1-207ENST00000580086 FLGP20930 4061 aaPredicted RBP3.26□□□□□ -1.89
MSL1-207ENST00000580086 LRP2P98164 4655 aa3.24□□□□□ -1.89
MSL1-207ENST00000580086 MUC2Q02817 5179 aa3.23□□□□□ -1.89
MSL1-207ENST00000580086 MUC17Q685J3 4493 aa3.21□□□□□ -1.89
MSL1-207ENST00000580086 MT1HL1P0DM35 61 aa3.2□□□□□ -1.9
MSL1-207ENST00000580086 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
MSL1-207ENST00000580086 CRCT1Q9UGL9 99 aa3.17□□□□□ -1.9
MSL1-207ENST00000580086 HERC1Q15751 4861 aa3.17□□□□□ -1.9
MSL1-207ENST00000580086 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
MSL1-207ENST00000580086 KRTAP4-5Q9BYR2 181 aa3.14□□□□□ -1.91
MSL1-207ENST00000580086 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
MSL1-207ENST00000580086 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
MSL1-207ENST00000580086 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.91
MSL1-207ENST00000580086 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
MSL1-207ENST00000580086 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
MSL1-207ENST00000580086 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
MSL1-207ENST00000580086 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.92
MSL1-207ENST00000580086 SPRR2GQ9BYE4 73 aa3.03□□□□□ -1.93
MSL1-207ENST00000580086 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
MSL1-207ENST00000580086 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
MSL1-207ENST00000580086 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
MSL1-207ENST00000580086 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
MSL1-207ENST00000580086 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
MSL1-207ENST00000580086 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
MSL1-207ENST00000580086 KRTAP4-8Q9BYQ9 185 aa2.94□□□□□ -1.94
MSL1-207ENST00000580086 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
MSL1-207ENST00000580086 HMCN2Q8NDA2 5059 aa2.93□□□□□ -1.94
MSL1-207ENST00000580086 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
MSL1-207ENST00000580086 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
MSL1-207ENST00000580086 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
MSL1-207ENST00000580086 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
MSL1-207ENST00000580086 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
MSL1-207ENST00000580086 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
MSL1-207ENST00000580086 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
MSL1-207ENST00000580086 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
MSL1-207ENST00000580086 MT1XP80297 61 aa2.83□□□□□ -1.96
MSL1-207ENST00000580086 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
MSL1-207ENST00000580086 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms