RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 H0Y9P7 68 aa10.33□□□□□ -0.76
VAPA-205ENST00000578314 J3QR89 54 aa10.33□□□□□ -0.76
VAPA-205ENST00000578314 KRTAP6-3Q3LI67 103 aa10.32□□□□□ -0.76
VAPA-205ENST00000578314 KLKP1Q107X0 134 aa10.31□□□□□ -0.76
VAPA-205ENST00000578314 KRTAP19-8Q3LI54 63 aa10.31□□□□□ -0.76
VAPA-205ENST00000578314 MT1BP07438 61 aa10.3□□□□□ -0.76
VAPA-205ENST00000578314 Q5VV11 94 aa10.27□□□□□ -0.77
VAPA-205ENST00000578314 CRIPTQ9P021 101 aa10.19□□□□□ -0.78
VAPA-205ENST00000578314 NDUFC1O43677 76 aa10.18□□□□□ -0.78
VAPA-205ENST00000578314 IMUPQ9GZP8 106 aa10.18□□□□□ -0.78
VAPA-205ENST00000578314 A6NN06 94 aa10.17□□□□□ -0.78
VAPA-205ENST00000578314 A8MUN3 132 aa10.17□□□□□ -0.78
VAPA-205ENST00000578314 LINC00208Q96KT6 92 aa10.17□□□□□ -0.78
VAPA-205ENST00000578314 OCR1Q9BZK8 76 aa10.17□□□□□ -0.78
VAPA-205ENST00000578314 H0YAA0 97 aa10.13□□□□□ -0.79
VAPA-205ENST00000578314 MP68P56378 58 aa10.12□□□□□ -0.79
VAPA-205ENST00000578314 KRTAP10-5P60370 271 aa10.07□□□□□ -0.8
VAPA-205ENST00000578314 NEBP20929 6669 aa10.03□□□□□ -0.8
VAPA-205ENST00000578314 K7ERU9 68 aa10.01□□□□□ -0.81
VAPA-205ENST00000578314 SCGB1A1P11684 91 aa10.01□□□□□ -0.81
VAPA-205ENST00000578314 H3BPC8 53 aa10□□□□□ -0.81
VAPA-205ENST00000578314 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
VAPA-205ENST00000578314 MUC12Q9UKN1 5478 aa9.98□□□□□ -0.81
VAPA-205ENST00000578314 MT-ATP8P03928 68 aa9.88□□□□□ -0.83
VAPA-205ENST00000578314 DMAC1Q96GE9 116 aa9.87□□□□□ -0.83
VAPA-205ENST00000578314 SMIM20Q8N5G0 67 aa9.79□□□□□ -0.84
VAPA-205ENST00000578314 KRTAP5-9P26371 169 aa9.76□□□□□ -0.85
VAPA-205ENST00000578314 P0C880 135 aa9.75□□□□□ -0.85
VAPA-205ENST00000578314 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
VAPA-205ENST00000578314 TRAV7A0A075B6U4 112 aa9.73□□□□□ -0.85
VAPA-205ENST00000578314 R4GN34 69 aa9.73□□□□□ -0.85
VAPA-205ENST00000578314 KMT2DO14686 5537 aa9.72□□□□□ -0.85
VAPA-205ENST00000578314 KRTAP3-2Q9BYR7 98 aa9.7□□□□□ -0.86
VAPA-205ENST00000578314 MDN1Q9NU22 5596 aa9.7□□□□□ -0.86
VAPA-205ENST00000578314 PLAC4Q8WY50 150 aa9.68□□□□□ -0.86
VAPA-205ENST00000578314 PRO2289Q9P1D8 64 aa9.68□□□□□ -0.86
VAPA-205ENST00000578314 MT1XP80297 61 aa9.66□□□□□ -0.86
VAPA-205ENST00000578314 KRTAP20-1Q3LI63 56 aa9.65□□□□□ -0.86
VAPA-205ENST00000578314 M0QZ58 72 aa9.64□□□□□ -0.87
VAPA-205ENST00000578314 ACYP2P14621 99 aa9.63□□□□□ -0.87
VAPA-205ENST00000578314 SPTSSBQ8NFR3 76 aa9.51□□□□□ -0.89
VAPA-205ENST00000578314 SNURFQ9Y675 71 aa9.5□□□□□ -0.89
VAPA-205ENST00000578314 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
VAPA-205ENST00000578314 SERP2Q8N6R1 65 aa9.48□□□□□ -0.89
VAPA-205ENST00000578314 KRTAP12-2P59991 146 aa9.44□□□□□ -0.9
VAPA-205ENST00000578314 SPRR2FQ96RM1 72 aa9.42□□□□□ -0.9
VAPA-205ENST00000578314 CHKB-CPT1BH3BT56 60 aa9.41□□□□□ -0.9
VAPA-205ENST00000578314 SPANXA2-OT1Q8N9U9 137 aa9.36□□□□□ -0.91
VAPA-205ENST00000578314 KRTAP2-3P0C7H8 128 aa9.34□□□□□ -0.91
VAPA-205ENST00000578314 KRTAP8-1Q8IUC2 63 aa9.34□□□□□ -0.91
VAPA-205ENST00000578314 KRTAP2-4Q9BYR9 128 aa9.34□□□□□ -0.91
VAPA-205ENST00000578314 SPRR2EP22531 72 aa9.33□□□□□ -0.92
VAPA-205ENST00000578314 SPRR2BP35325 72 aa9.33□□□□□ -0.92
VAPA-205ENST00000578314 SPRR2AP35326 72 aa9.33□□□□□ -0.92
VAPA-205ENST00000578314 COX7CP15954 63 aa9.24□□□□□ -0.93
VAPA-205ENST00000578314 KRTAP4-8A0A0G2JLE6 195 aa9.23□□□□□ -0.93
VAPA-205ENST00000578314 KRTAP4-8Q9BYQ9 185 aa9.23□□□□□ -0.93
VAPA-205ENST00000578314 KRTAP10-7P60409 375 aaPredicted RBP9.2□□□□□ -0.94
VAPA-205ENST00000578314 KRTAP10-12P60413 245 aa9.19□□□□□ -0.94
VAPA-205ENST00000578314 LCE1AQ5T7P2 110 aa9.18□□□□□ -0.94
VAPA-205ENST00000578314 KRTAP13-4Q3LI77 160 aa9.11□□□□□ -0.95
VAPA-205ENST00000578314 COA5Q86WW8 74 aa9.08□□□□□ -0.96
VAPA-205ENST00000578314 ANAPC13Q9BS18 74 aa9.05□□□□□ -0.96
VAPA-205ENST00000578314 KRTAP2-2Q9BYT5 123 aa9.04□□□□□ -0.96
VAPA-205ENST00000578314 KRTAP2-1Q9BYU5 128 aa9.04□□□□□ -0.96
VAPA-205ENST00000578314 H7BZZ5 65 aa9.03□□□□□ -0.96
VAPA-205ENST00000578314 SPRR2DP22532 72 aa9.02□□□□□ -0.97
VAPA-205ENST00000578314 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
VAPA-205ENST00000578314 CAMK2N1Q7Z7J9 78 aa8.93□□□□□ -0.98
VAPA-205ENST00000578314 SEC61GP60059 68 aa8.92□□□□□ -0.98
VAPA-205ENST00000578314 SERP1Q9Y6X1 66 aa8.91□□□□□ -0.98
VAPA-205ENST00000578314 CCDC179H3BU77 68 aa8.81□□□□□ -1
VAPA-205ENST00000578314 LCE3BQ5TA77 95 aa8.8□□□□□ -1
VAPA-205ENST00000578314 A0A0D9SG42 100 aa8.79□□□□□ -1
VAPA-205ENST00000578314 A0A1B0GU33 70 aa8.79□□□□□ -1
VAPA-205ENST00000578314 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
VAPA-205ENST00000578314 ATP5EP56381 51 aaPredicted RBP8.72□□□□□ -1.01
VAPA-205ENST00000578314 SPINT4Q6UDR6 99 aa8.68□□□□□ -1.02
VAPA-205ENST00000578314 A0A1B0GU69 56 aa8.65□□□□□ -1.02
VAPA-205ENST00000578314 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
VAPA-205ENST00000578314 KRTAP19-7Q3SYF9 63 aa8.64□□□□□ -1.03
VAPA-205ENST00000578314 MT1EP04732 61 aa8.56□□□□□ -1.04
VAPA-205ENST00000578314 SMIM26A0A096LP01 95 aa8.54□□□□□ -1.04
VAPA-205ENST00000578314 TMEM258P61165 79 aa8.54□□□□□ -1.04
VAPA-205ENST00000578314 LCE5AQ5TCM9 118 aa8.53□□□□□ -1.04
VAPA-205ENST00000578314 KRTAP19-3Q7Z4W3 81 aa8.49□□□□□ -1.05
VAPA-205ENST00000578314 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
VAPA-205ENST00000578314 A8MU10 97 aa8.46□□□□□ -1.06
VAPA-205ENST00000578314 DSTQ03001 7570 aaKnown RBP8.45□□□□□ -1.06
VAPA-205ENST00000578314 PCP4P48539 62 aa8.42□□□□□ -1.06
VAPA-205ENST00000578314 KRTAP19-5Q3LI72 72 aa8.4□□□□□ -1.06
VAPA-205ENST00000578314 LINC01558Q9Y6Z2 57 aa8.39□□□□□ -1.07
VAPA-205ENST00000578314 MT1GP13640 62 aa8.3□□□□□ -1.08
VAPA-205ENST00000578314 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
VAPA-205ENST00000578314 GPR98Q8WXG9 6306 aa8.29□□□□□ -1.08
VAPA-205ENST00000578314 TNP1P09430 55 aa8.25□□□□□ -1.09
VAPA-205ENST00000578314 KRTAP4-9Q9BYQ8 210 aa8.24□□□□□ -1.09
VAPA-205ENST00000578314 PP632Q6XCG6 107 aa8.21□□□□□ -1.1
VAPA-205ENST00000578314 LCE3AQ5TA76 89 aa8.2□□□□□ -1.1
VAPA-205ENST00000578314 UQCR11O14957 56 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms