RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
CUEDC1-206ENST00000577830 C20orf166-AS1Q96NR2 134 aa7.83□□□□□ -1.16
CUEDC1-206ENST00000577830 SEC61BP60468 96 aaKnown RBP7.82□□□□□ -1.16
CUEDC1-206ENST00000577830 APOBP04114 4563 aaKnown RBP7.81□□□□□ -1.16
CUEDC1-206ENST00000577830 MYCBP2O75592 4640 aa7.81□□□□□ -1.16
CUEDC1-206ENST00000577830 COX6B2Q6YFQ2 88 aa7.76□□□□□ -1.17
CUEDC1-206ENST00000577830 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
CUEDC1-206ENST00000577830 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
CUEDC1-206ENST00000577830 KRTAP10-4P60372 401 aaPredicted RBP7.75□□□□□ -1.17
CUEDC1-206ENST00000577830 Q5VSD8 79 aa7.71□□□□□ -1.18
CUEDC1-206ENST00000577830 KRTAP25-1Q3LHN0 102 aa7.68□□□□□ -1.18
CUEDC1-206ENST00000577830 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
CUEDC1-206ENST00000577830 EPPK1P58107 5090 aaKnown RBP7.65□□□□□ -1.18
CUEDC1-206ENST00000577830 KRTAP10-8P60410 259 aa7.62□□□□□ -1.19
CUEDC1-206ENST00000577830 KRTAP17-1Q9BYP8 105 aa7.61□□□□□ -1.19
CUEDC1-206ENST00000577830 S4R3F8 94 aa7.59□□□□□ -1.19
CUEDC1-206ENST00000577830 KRTAP13-4Q3LI77 160 aa7.57□□□□□ -1.2
CUEDC1-206ENST00000577830 HSPG2P98160 4391 aa7.57□□□□□ -1.2
CUEDC1-206ENST00000577830 RPL37P61927 97 aaKnown RBP7.56□□□□□ -1.2
CUEDC1-206ENST00000577830 PKHD1L1Q86WI1 4243 aa7.56□□□□□ -1.2
CUEDC1-206ENST00000577830 XP32Q5T750 250 aa7.53□□□□□ -1.2
CUEDC1-206ENST00000577830 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
CUEDC1-206ENST00000577830 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
CUEDC1-206ENST00000577830 RYR1P21817 5038 aa7.51□□□□□ -1.21
CUEDC1-206ENST00000577830 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
CUEDC1-206ENST00000577830 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
CUEDC1-206ENST00000577830 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
CUEDC1-206ENST00000577830 TNXBP22105 4242 aa7.41□□□□□ -1.22
CUEDC1-206ENST00000577830 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
CUEDC1-206ENST00000577830 LPAP08519 4548 aa7.36□□□□□ -1.23
CUEDC1-206ENST00000577830 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
CUEDC1-206ENST00000577830 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
CUEDC1-206ENST00000577830 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
CUEDC1-206ENST00000577830 LRP2P98164 4655 aa7.34□□□□□ -1.23
CUEDC1-206ENST00000577830 M0QZ58 72 aa7.23□□□□□ -1.25
CUEDC1-206ENST00000577830 ABCA13Q86UQ4 5058 aa7.22□□□□□ -1.25
CUEDC1-206ENST00000577830 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
CUEDC1-206ENST00000577830 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
CUEDC1-206ENST00000577830 R4GN34 69 aa7.18□□□□□ -1.26
CUEDC1-206ENST00000577830 HERC2O95714 4834 aa7.12□□□□□ -1.27
CUEDC1-206ENST00000577830 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
CUEDC1-206ENST00000577830 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
CUEDC1-206ENST00000577830 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
CUEDC1-206ENST00000577830 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
CUEDC1-206ENST00000577830 MUC2Q02817 5179 aa6.92□□□□□ -1.3
CUEDC1-206ENST00000577830 HERC1Q15751 4861 aa6.88□□□□□ -1.31
CUEDC1-206ENST00000577830 KRTAP4-1Q9BYQ7 146 aa6.88□□□□□ -1.31
CUEDC1-206ENST00000577830 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
CUEDC1-206ENST00000577830 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
CUEDC1-206ENST00000577830 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
CUEDC1-206ENST00000577830 HMCN2Q8NDA2 5059 aa6.64□□□□□ -1.35
CUEDC1-206ENST00000577830 FAT4Q6V0I7 4981 aa6.58□□□□□ -1.36
CUEDC1-206ENST00000577830 RNF213Q63HN8 5207 aa6.58□□□□□ -1.36
CUEDC1-206ENST00000577830 M0R2T5 61 aa6.57□□□□□ -1.36
CUEDC1-206ENST00000577830 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
CUEDC1-206ENST00000577830 UBR4Q5T4S7 5183 aa6.49□□□□□ -1.37
CUEDC1-206ENST00000577830 TNP1P09430 55 aa6.48□□□□□ -1.37
CUEDC1-206ENST00000577830 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
CUEDC1-206ENST00000577830 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
CUEDC1-206ENST00000577830 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
CUEDC1-206ENST00000577830 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
CUEDC1-206ENST00000577830 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
CUEDC1-206ENST00000577830 LCE2CQ5TA81 110 aa6.28□□□□□ -1.4
CUEDC1-206ENST00000577830 MT1HP80294 61 aa6.18□□□□□ -1.42
CUEDC1-206ENST00000577830 LCE3AQ5TA76 89 aa6.14□□□□□ -1.43
CUEDC1-206ENST00000577830 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
CUEDC1-206ENST00000577830 MT1FP04733 61 aa6.06□□□□□ -1.44
CUEDC1-206ENST00000577830 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
CUEDC1-206ENST00000577830 MT2AP02795 61 aa6.04□□□□□ -1.44
CUEDC1-206ENST00000577830 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
CUEDC1-206ENST00000577830 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
CUEDC1-206ENST00000577830 USH2AO75445 5202 aa5.83□□□□□ -1.48
CUEDC1-206ENST00000577830 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
CUEDC1-206ENST00000577830 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
CUEDC1-206ENST00000577830 INE1O15225 51 aa5.79□□□□□ -1.48
CUEDC1-206ENST00000577830 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
CUEDC1-206ENST00000577830 MT1XP80297 61 aa5.79□□□□□ -1.48
CUEDC1-206ENST00000577830 MT1BP07438 61 aa5.79□□□□□ -1.48
CUEDC1-206ENST00000577830 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
CUEDC1-206ENST00000577830 KMT2DO14686 5537 aa5.78□□□□□ -1.48
CUEDC1-206ENST00000577830 LCE2BO14633 110 aa5.73□□□□□ -1.49
CUEDC1-206ENST00000577830 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
CUEDC1-206ENST00000577830 KRTAP9-3Q9BYQ3 159 aa5.71□□□□□ -1.5
CUEDC1-206ENST00000577830 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
CUEDC1-206ENST00000577830 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
CUEDC1-206ENST00000577830 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
CUEDC1-206ENST00000577830 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
CUEDC1-206ENST00000577830 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
CUEDC1-206ENST00000577830 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
CUEDC1-206ENST00000577830 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
CUEDC1-206ENST00000577830 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
CUEDC1-206ENST00000577830 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
CUEDC1-206ENST00000577830 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
CUEDC1-206ENST00000577830 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
CUEDC1-206ENST00000577830 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
CUEDC1-206ENST00000577830 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
CUEDC1-206ENST00000577830 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
CUEDC1-206ENST00000577830 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
CUEDC1-206ENST00000577830 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
CUEDC1-206ENST00000577830 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms