RNA–Protein interactions for RNA: ENST00000577208.5

NUP85-204, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-204ENST00000577208 DEFB124Q8NES8 71 aa1.28□□□□□ -2.2
NUP85-204ENST00000577208 CACNA1AO00555 2505 aa1.28□□□□□ -2.2
NUP85-204ENST00000577208 UNC79Q9P2D8 2635 aa1.28□□□□□ -2.2
NUP85-204ENST00000577208 FLGP20930 4061 aaPredicted RBP1.27□□□□□ -2.21
NUP85-204ENST00000577208 ZFYVE26Q68DK2 2539 aa1.27□□□□□ -2.21
NUP85-204ENST00000577208 TRIOO75962 3097 aa1.26□□□□□ -2.21
NUP85-204ENST00000577208 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
NUP85-204ENST00000577208 FLNBO75369 2602 aaKnown RBP1.26□□□□□ -2.21
NUP85-204ENST00000577208 ANKRD11Q6UB99 2663 aaPredicted RBP1.25□□□□□ -2.21
NUP85-204ENST00000577208 HTTP42858 3142 aa1.25□□□□□ -2.21
NUP85-204ENST00000577208 H3BNG1 76 aa1.25□□□□□ -2.21
NUP85-204ENST00000577208 SPTBN5Q9NRC6 3674 aaKnown RBP1.25□□□□□ -2.21
NUP85-204ENST00000577208 CUBNO60494 3623 aa1.24□□□□□ -2.21
NUP85-204ENST00000577208 NIPBLQ6KC79 2804 aaeCLIP1.23□□□□□ -2.21
NUP85-204ENST00000577208 ACACBO00763 2458 aa1.23□□□□□ -2.21
NUP85-204ENST00000577208 MAP1AP78559 2803 aaPredicted RBP1.22□□□□□ -2.21
NUP85-204ENST00000577208 USP9XQ93008 2570 aaPredicted RBP1.22□□□□□ -2.21
NUP85-204ENST00000577208 KALRNO60229 2985 aa1.22□□□□□ -2.21
NUP85-204ENST00000577208 U3KQA8 63 aa1.22□□□□□ -2.21
NUP85-204ENST00000577208 MXRA5Q9NR99 2828 aa1.22□□□□□ -2.21
NUP85-204ENST00000577208 SMG1Q96Q15 3661 aaKnown RBP1.22□□□□□ -2.21
NUP85-204ENST00000577208 DNAH6Q9C0G6 4158 aa1.22□□□□□ -2.21
NUP85-204ENST00000577208 MKI67P46013 3256 aaKnown RBP1.21□□□□□ -2.21
NUP85-204ENST00000577208 DNAH10Q8IVF4 4471 aa1.21□□□□□ -2.22
NUP85-204ENST00000577208 CSMD1Q96PZ7 3565 aa1.21□□□□□ -2.22
NUP85-204ENST00000577208 TEP1Q99973 2627 aaKnown RBP1.2□□□□□ -2.22
NUP85-204ENST00000577208 DEFB110Q30KQ9 67 aa1.2□□□□□ -2.22
NUP85-204ENST00000577208 CEP350Q5VT06 3117 aa1.2□□□□□ -2.22
NUP85-204ENST00000577208 TLN2Q9Y4G6 2542 aa1.2□□□□□ -2.22
NUP85-204ENST00000577208 DNAH9Q9NYC9 4486 aa1.2□□□□□ -2.22
NUP85-204ENST00000577208 MYO18BQ8IUG5 2567 aa1.19□□□□□ -2.22
NUP85-204ENST00000577208 FAT3Q8TDW7 4589 aa1.19□□□□□ -2.22
NUP85-204ENST00000577208 DEFB108BQ8NET1 73 aa1.19□□□□□ -2.22
NUP85-204ENST00000577208 BOD1L1Q8NFC6 3051 aa1.19□□□□□ -2.22
NUP85-204ENST00000577208 TEX15Q9BXT5 2789 aa1.19□□□□□ -2.22
NUP85-204ENST00000577208 ITPR2Q14571 2701 aa1.19□□□□□ -2.22
NUP85-204ENST00000577208 CFAP46Q8IYW2 2715 aa1.18□□□□□ -2.22
NUP85-204ENST00000577208 SONP18583 2426 aaKnown RBP1.18□□□□□ -2.22
NUP85-204ENST00000577208 SZT2Q5T011 3432 aa1.17□□□□□ -2.22
NUP85-204ENST00000577208 APOBP04114 4563 aaKnown RBP1.16□□□□□ -2.22
NUP85-204ENST00000577208 LRP1Q07954 4544 aaKnown RBP1.16□□□□□ -2.22
NUP85-204ENST00000577208 PKHD1P08F94 4074 aa1.16□□□□□ -2.22
NUP85-204ENST00000577208 DNAH1Q9P2D7 4330 aa1.16□□□□□ -2.22
NUP85-204ENST00000577208 LAMA3Q16787 3333 aa1.15□□□□□ -2.22
NUP85-204ENST00000577208 FASNP49327 2511 aaKnown RBP1.15□□□□□ -2.23
NUP85-204ENST00000577208 DMDP11532 3685 aa1.14□□□□□ -2.23
NUP85-204ENST00000577208 TENM3Q9P273 2699 aa1.14□□□□□ -2.23
NUP85-204ENST00000577208 HRNRQ86YZ3 2850 aaPredicted RBP1.13□□□□□ -2.23
NUP85-204ENST00000577208 ADGRG4Q8IZF6 3080 aa1.13□□□□□ -2.23
NUP85-204ENST00000577208 CMYA5Q8N3K9 4069 aa1.13□□□□□ -2.23
NUP85-204ENST00000577208 TGP01266 2768 aa1.13□□□□□ -2.23
NUP85-204ENST00000577208 FLNAP21333 2647 aaKnown RBP1.12□□□□□ -2.23
NUP85-204ENST00000577208 SMR3BP02814 79 aaPredicted RBP1.12□□□□□ -2.23
NUP85-204ENST00000577208 MAST4O15021 2626 aa1.11□□□□□ -2.23
NUP85-204ENST00000577208 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
NUP85-204ENST00000577208 PLECQ15149 4684 aaKnown RBP1.11□□□□□ -2.23
NUP85-204ENST00000577208 SVEP1Q4LDE5 3571 aa1.1□□□□□ -2.23
NUP85-204ENST00000577208 KRTAP19-5Q3LI72 72 aa1.1□□□□□ -2.23
NUP85-204ENST00000577208 FREM2Q5SZK8 3169 aa1.1□□□□□ -2.23
NUP85-204ENST00000577208 DOPEY1Q5JWR5 2465 aa1.09□□□□□ -2.23
NUP85-204ENST00000577208 MUC3AQ02505 3323 aa1.08□□□□□ -2.24
NUP85-204ENST00000577208 MT1AP04731 61 aa1.08□□□□□ -2.24
NUP85-204ENST00000577208 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
NUP85-204ENST00000577208 LINC01556Q5JQF7 62 aa1.08□□□□□ -2.24
NUP85-204ENST00000577208 TRRAPQ9Y4A5 3859 aa1.07□□□□□ -2.24
NUP85-204ENST00000577208 LPAP08519 4548 aa1.07□□□□□ -2.24
NUP85-204ENST00000577208 DCHS1Q96JQ0 3298 aa1.07□□□□□ -2.24
NUP85-204ENST00000577208 A0A096LPF7 62 aa1.07□□□□□ -2.24
NUP85-204ENST00000577208 SPRR2DP22532 72 aa1.07□□□□□ -2.24
NUP85-204ENST00000577208 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
NUP85-204ENST00000577208 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
NUP85-204ENST00000577208 NBEAL1Q6ZS30 2694 aa1.06□□□□□ -2.24
NUP85-204ENST00000577208 RPS29P62273 56 aaKnown RBP1.05□□□□□ -2.24
NUP85-204ENST00000577208 WDFY4Q6ZS81 3184 aa1.05□□□□□ -2.24
NUP85-204ENST00000577208 DNAH17Q9UFH2 4485 aa1.04□□□□□ -2.24
NUP85-204ENST00000577208 DNAH5Q8TE73 4624 aa1.04□□□□□ -2.24
NUP85-204ENST00000577208 SPRR2BP35325 72 aa1.03□□□□□ -2.24
NUP85-204ENST00000577208 Q9Y3F1 56 aa1.03□□□□□ -2.24
NUP85-204ENST00000577208 SPTAN1Q13813 2472 aaKnown RBP1.03□□□□□ -2.25
NUP85-204ENST00000577208 LAMA1P25391 3075 aa1.02□□□□□ -2.25
NUP85-204ENST00000577208 MGAM2Q2M2H8 2515 aa1.01□□□□□ -2.25
NUP85-204ENST00000577208 CFAP47Q6ZTR5 3102 aa1.01□□□□□ -2.25
NUP85-204ENST00000577208 DEFB133Q30KQ1 61 aa1.01□□□□□ -2.25
NUP85-204ENST00000577208 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
NUP85-204ENST00000577208 FAT1Q14517 4588 aa1.01□□□□□ -2.25
NUP85-204ENST00000577208 CEP295Q9C0D2 2601 aa1.01□□□□□ -2.25
NUP85-204ENST00000577208 CSMD2Q7Z408 3487 aa0.99□□□□□ -2.25
NUP85-204ENST00000577208 VPS13CQ709C8 3753 aa0.99□□□□□ -2.25
NUP85-204ENST00000577208 CENPEQ02224 2701 aa0.99□□□□□ -2.25
NUP85-204ENST00000577208 LRP1BQ9NZR2 4599 aa0.99□□□□□ -2.25
NUP85-204ENST00000577208 IGSF10Q6WRI0 2623 aa0.98□□□□□ -2.25
NUP85-204ENST00000577208 XIRP2A4UGR9 3374 aa0.97□□□□□ -2.25
NUP85-204ENST00000577208 SPRR2AP35326 72 aa0.96□□□□□ -2.26
NUP85-204ENST00000577208 DYNC1H1Q14204 4646 aaKnown RBP0.96□□□□□ -2.26
NUP85-204ENST00000577208 MUC17Q685J3 4493 aa0.95□□□□□ -2.26
NUP85-204ENST00000577208 VPS13AQ96RL7 3174 aa0.94□□□□□ -2.26
NUP85-204ENST00000577208 LAMA2P24043 3122 aaKnown RBP0.93□□□□□ -2.26
NUP85-204ENST00000577208 USP34Q70CQ2 3546 aa0.92□□□□□ -2.26
NUP85-204ENST00000577208 TLN1Q9Y490 2541 aaKnown RBP0.91□□□□□ -2.26
NUP85-204ENST00000577208 STAB2Q8WWQ8 2551 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms