RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 NDUFC1O43677 76 aa7□□□□□ -1.29
SMG6-220ENST00000576218 A8MUN3 132 aa6.99□□□□□ -1.29
SMG6-220ENST00000576218 KLKP1Q107X0 134 aa6.98□□□□□ -1.29
SMG6-220ENST00000576218 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
SMG6-220ENST00000576218 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
SMG6-220ENST00000576218 H3BPC8 53 aa6.96□□□□□ -1.3
SMG6-220ENST00000576218 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
SMG6-220ENST00000576218 IMUPQ9GZP8 106 aa6.93□□□□□ -1.3
SMG6-220ENST00000576218 MT-ATP8P03928 68 aa6.89□□□□□ -1.31
SMG6-220ENST00000576218 Q5VV11 94 aa6.88□□□□□ -1.31
SMG6-220ENST00000576218 FCGBPQ9Y6R7 5405 aaPredicted RBP6.88□□□□□ -1.31
SMG6-220ENST00000576218 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
SMG6-220ENST00000576218 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
SMG6-220ENST00000576218 CRIPTQ9P021 101 aa6.85□□□□□ -1.31
SMG6-220ENST00000576218 H0YAA0 97 aa6.82□□□□□ -1.32
SMG6-220ENST00000576218 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
SMG6-220ENST00000576218 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
SMG6-220ENST00000576218 TRAV7A0A075B6U4 112 aa6.8□□□□□ -1.32
SMG6-220ENST00000576218 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
SMG6-220ENST00000576218 A6NN06 94 aa6.76□□□□□ -1.33
SMG6-220ENST00000576218 MT1BP07438 61 aa6.76□□□□□ -1.33
SMG6-220ENST00000576218 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
SMG6-220ENST00000576218 C20orf197Q8N268 126 aa6.73□□□□□ -1.33
SMG6-220ENST00000576218 ACYP2P14621 99 aa6.71□□□□□ -1.34
SMG6-220ENST00000576218 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
SMG6-220ENST00000576218 SNURFQ9Y675 71 aa6.68□□□□□ -1.34
SMG6-220ENST00000576218 CHKB-CPT1BH3BT56 60 aa6.67□□□□□ -1.34
SMG6-220ENST00000576218 R4GN34 69 aa6.67□□□□□ -1.34
SMG6-220ENST00000576218 SYNE2Q8WXH0 6885 aaKnown RBP6.66□□□□□ -1.34
SMG6-220ENST00000576218 M0QZ58 72 aa6.62□□□□□ -1.35
SMG6-220ENST00000576218 P0C880 135 aa6.62□□□□□ -1.35
SMG6-220ENST00000576218 SERP2Q8N6R1 65 aa6.62□□□□□ -1.35
SMG6-220ENST00000576218 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
SMG6-220ENST00000576218 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
SMG6-220ENST00000576218 PCP4P48539 62 aa6.58□□□□□ -1.36
SMG6-220ENST00000576218 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
SMG6-220ENST00000576218 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
SMG6-220ENST00000576218 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
SMG6-220ENST00000576218 KRTAP6-3Q3LI67 103 aa6.53□□□□□ -1.36
SMG6-220ENST00000576218 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
SMG6-220ENST00000576218 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
SMG6-220ENST00000576218 COX7CP15954 63 aa6.44□□□□□ -1.38
SMG6-220ENST00000576218 COA5Q86WW8 74 aa6.39□□□□□ -1.39
SMG6-220ENST00000576218 MT1XP80297 61 aa6.38□□□□□ -1.39
SMG6-220ENST00000576218 CCDC179H3BU77 68 aa6.37□□□□□ -1.39
SMG6-220ENST00000576218 NEBP20929 6669 aa6.34□□□□□ -1.39
SMG6-220ENST00000576218 SEC61GP60059 68 aa6.34□□□□□ -1.39
SMG6-220ENST00000576218 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
SMG6-220ENST00000576218 H7BZZ5 65 aa6.28□□□□□ -1.4
SMG6-220ENST00000576218 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
SMG6-220ENST00000576218 KRTAP5-9P26371 169 aa6.24□□□□□ -1.41
SMG6-220ENST00000576218 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
SMG6-220ENST00000576218 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.42
SMG6-220ENST00000576218 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
SMG6-220ENST00000576218 TMEM258P61165 79 aa6.2□□□□□ -1.42
SMG6-220ENST00000576218 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
SMG6-220ENST00000576218 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
SMG6-220ENST00000576218 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
SMG6-220ENST00000576218 A0A0D9SG42 100 aa6.15□□□□□ -1.42
SMG6-220ENST00000576218 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
SMG6-220ENST00000576218 A0A1B0GU33 70 aa6.13□□□□□ -1.43
SMG6-220ENST00000576218 A0A1B0GU69 56 aa6.11□□□□□ -1.43
SMG6-220ENST00000576218 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
SMG6-220ENST00000576218 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
SMG6-220ENST00000576218 KMT2DO14686 5537 aa6.09□□□□□ -1.43
SMG6-220ENST00000576218 SPRR2EP22531 72 aa6.08□□□□□ -1.44
SMG6-220ENST00000576218 SPRR2BP35325 72 aa6.08□□□□□ -1.44
SMG6-220ENST00000576218 SPRR2AP35326 72 aa6.08□□□□□ -1.44
SMG6-220ENST00000576218 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
SMG6-220ENST00000576218 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
SMG6-220ENST00000576218 SPINT4Q6UDR6 99 aa6.07□□□□□ -1.44
SMG6-220ENST00000576218 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
SMG6-220ENST00000576218 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
SMG6-220ENST00000576218 PRR15LQ9BU68 103 aa6□□□□□ -1.45
SMG6-220ENST00000576218 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
SMG6-220ENST00000576218 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
SMG6-220ENST00000576218 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
SMG6-220ENST00000576218 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
SMG6-220ENST00000576218 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
SMG6-220ENST00000576218 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.46
SMG6-220ENST00000576218 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.46
SMG6-220ENST00000576218 A8MU10 97 aa5.89□□□□□ -1.47
SMG6-220ENST00000576218 SPRR2DP22532 72 aa5.89□□□□□ -1.47
SMG6-220ENST00000576218 LINC01558Q9Y6Z2 57 aa5.84□□□□□ -1.47
SMG6-220ENST00000576218 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
SMG6-220ENST00000576218 UQCR11O14957 56 aa5.75□□□□□ -1.49
SMG6-220ENST00000576218 V9GYY9 64 aa5.75□□□□□ -1.49
SMG6-220ENST00000576218 Q1T7F1 81 aa5.71□□□□□ -1.5
SMG6-220ENST00000576218 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.5
SMG6-220ENST00000576218 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
SMG6-220ENST00000576218 TNP1P09430 55 aa5.69□□□□□ -1.5
SMG6-220ENST00000576218 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
SMG6-220ENST00000576218 LCE3BQ5TA77 95 aa5.68□□□□□ -1.5
SMG6-220ENST00000576218 MT1EP04732 61 aa5.66□□□□□ -1.5
SMG6-220ENST00000576218 C10orf95Q9H7T3 257 aa5.64□□□□□ -1.51
SMG6-220ENST00000576218 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
SMG6-220ENST00000576218 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
SMG6-220ENST00000576218 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
SMG6-220ENST00000576218 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
SMG6-220ENST00000576218 K7ERS5 55 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9059.8 ms