RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	FSIP2	Q5CZC0	6907 aa		7.17	□□□□□ -1.26
ABR-223	ENST00000573895	PCP4	P48539	62 aa		7.15	□□□□□ -1.26
ABR-223	ENST00000573895	CRCT1	Q9UGL9	99 aa		7.15	□□□□□ -1.26
ABR-223	ENST00000573895	SPANXA2-OT1	Q8N9U9	137 aa		7.14	□□□□□ -1.27
ABR-223	ENST00000573895		H7BZZ5	65 aa		7.12	□□□□□ -1.27
ABR-223	ENST00000573895	KRTAP9-8	Q9BYQ0	159 aa		7.12	□□□□□ -1.27
ABR-223	ENST00000573895		A8MUN3	132 aa		7.11	□□□□□ -1.27
ABR-223	ENST00000573895	CYSTM1	Q9H1C7	97 aa		7.1	□□□□□ -1.27
ABR-223	ENST00000573895	H1FX-AS1	Q4G0G2	97 aa		7.08	□□□□□ -1.28
ABR-223	ENST00000573895	KRTAP3-1	Q9BYR8	98 aa		7.08	□□□□□ -1.28
ABR-223	ENST00000573895	DMAC1	Q96GE9	116 aa		7.05	□□□□□ -1.28
ABR-223	ENST00000573895	ACYP2	P14621	99 aa		7.04	□□□□□ -1.28
ABR-223	ENST00000573895	MT2A	P02795	61 aa		7.01	□□□□□ -1.29
ABR-223	ENST00000573895	ATP5E	P56381	51 aa	Predicted RBP	7	□□□□□ -1.29
ABR-223	ENST00000573895	TMEM258	P61165	79 aa		7	□□□□□ -1.29
ABR-223	ENST00000573895	MT1F	P04733	61 aa		6.94	□□□□□ -1.3
ABR-223	ENST00000573895		S4R3F8	94 aa		6.94	□□□□□ -1.3
ABR-223	ENST00000573895	KRTAP10-10	P60014	251 aa		6.92	□□□□□ -1.3
ABR-223	ENST00000573895	USH2A	O75445	5202 aa		6.91	□□□□□ -1.3
ABR-223	ENST00000573895	KRTAP9-3	Q9BYQ3	159 aa		6.9	□□□□□ -1.3
ABR-223	ENST00000573895	CHKB-CPT1B	H3BT56	60 aa		6.88	□□□□□ -1.31
ABR-223	ENST00000573895	LCA10	Q71F78	164 aa		6.88	□□□□□ -1.31
ABR-223	ENST00000573895	SPTSSB	Q8NFR3	76 aa		6.87	□□□□□ -1.31
ABR-223	ENST00000573895	CSAG1	Q6PB30	78 aa		6.86	□□□□□ -1.31
ABR-223	ENST00000573895	COA5	Q86WW8	74 aa		6.86	□□□□□ -1.31
ABR-223	ENST00000573895	SSPO	A2VEC9	5147 aa		6.83	□□□□□ -1.32
ABR-223	ENST00000573895	SERP1	Q9Y6X1	66 aa		6.79	□□□□□ -1.32
ABR-223	ENST00000573895	RPS28	P62857	69 aa	Known RBP	6.72	□□□□□ -1.33
ABR-223	ENST00000573895		H3BS24	57 aa		6.71	□□□□□ -1.34
ABR-223	ENST00000573895		H0YAA0	97 aa		6.69	□□□□□ -1.34
ABR-223	ENST00000573895	KRTAP19-1	Q8IUB9	90 aa		6.69	□□□□□ -1.34
ABR-223	ENST00000573895	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.68	□□□□□ -1.34
ABR-223	ENST00000573895	LOC100996750	A0A140TA64	210 aa		6.67	□□□□□ -1.34
ABR-223	ENST00000573895	KRTAP4-6	Q9BYQ5	205 aa		6.67	□□□□□ -1.34
ABR-223	ENST00000573895	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.65	□□□□□ -1.34
ABR-223	ENST00000573895	KRTAP19-6	Q3LI70	58 aa		6.63	□□□□□ -1.35
ABR-223	ENST00000573895	SMIM26	A0A096LP01	95 aa		6.6	□□□□□ -1.35
ABR-223	ENST00000573895	SEC61G	P60059	68 aa		6.6	□□□□□ -1.35
ABR-223	ENST00000573895	ADM2	Q7Z4H4	148 aa		6.6	□□□□□ -1.35
ABR-223	ENST00000573895	LINC01558	Q9Y6Z2	57 aa		6.56	□□□□□ -1.36
ABR-223	ENST00000573895		V9GYY9	64 aa		6.56	□□□□□ -1.36
ABR-223	ENST00000573895	KRTAP9-7	A8MTY7	169 aa		6.55	□□□□□ -1.36
ABR-223	ENST00000573895		A0A1B0GU69	56 aa		6.53	□□□□□ -1.36
ABR-223	ENST00000573895		Q1T7F1	81 aa		6.52	□□□□□ -1.37
ABR-223	ENST00000573895	PRR15L	Q9BU68	103 aa		6.52	□□□□□ -1.37
ABR-223	ENST00000573895	CRIPT	Q9P021	101 aa		6.51	□□□□□ -1.37
ABR-223	ENST00000573895		P0C880	135 aa		6.49	□□□□□ -1.37
ABR-223	ENST00000573895	SPRR2G	Q9BYE4	73 aa		6.48	□□□□□ -1.37
ABR-223	ENST00000573895	KRTAP19-8	Q3LI54	63 aa		6.43	□□□□□ -1.38
ABR-223	ENST00000573895		A0A1B0GU33	70 aa		6.41	□□□□□ -1.38
ABR-223	ENST00000573895		M0QZ58	72 aa		6.41	□□□□□ -1.38
ABR-223	ENST00000573895	MACF1	Q9UPN3	7388 aa	Known RBP	6.41	□□□□□ -1.38
ABR-223	ENST00000573895	MT1B	P07438	61 aa		6.4	□□□□□ -1.38
ABR-223	ENST00000573895		Q5VV11	94 aa		6.4	□□□□□ -1.38
ABR-223	ENST00000573895		R4GN34	69 aa		6.4	□□□□□ -1.38
ABR-223	ENST00000573895		A0A0A0MQY5	61 aa		6.37	□□□□□ -1.39
ABR-223	ENST00000573895	SYNE2	Q8WXH0	6885 aa	Known RBP	6.36	□□□□□ -1.39
ABR-223	ENST00000573895	PSPHP1	O15172	72 aa		6.35	□□□□□ -1.39
ABR-223	ENST00000573895		A6NN06	94 aa		6.31	□□□□□ -1.4
ABR-223	ENST00000573895	UQCR11	O14957	56 aa		6.31	□□□□□ -1.4
ABR-223	ENST00000573895	KRTAP10-5	P60370	271 aa		6.26	□□□□□ -1.41
ABR-223	ENST00000573895	KRTAP6-3	Q3LI67	103 aa		6.26	□□□□□ -1.41
ABR-223	ENST00000573895	KRTAP13-4	Q3LI77	160 aa		6.26	□□□□□ -1.41
ABR-223	ENST00000573895	SPATA8	Q6RVD6	105 aa		6.25	□□□□□ -1.41
ABR-223	ENST00000573895	LINC01554	Q52M75	96 aa		6.22	□□□□□ -1.41
ABR-223	ENST00000573895	MIR22HG	Q0VDD5	57 aa		6.2	□□□□□ -1.42
ABR-223	ENST00000573895		A6NED7	52 aa		6.19	□□□□□ -1.42
ABR-223	ENST00000573895		A0A0D9SG42	100 aa		6.15	□□□□□ -1.42
ABR-223	ENST00000573895	PLAC4	Q8WY50	150 aa		6.14	□□□□□ -1.43
ABR-223	ENST00000573895	KRTAP4-8	Q9BYQ9	185 aa		6.14	□□□□□ -1.43
ABR-223	ENST00000573895		A8MU10	97 aa		6.11	□□□□□ -1.43
ABR-223	ENST00000573895	CDC42SE1	Q9NRR8	79 aa		6.07	□□□□□ -1.44
ABR-223	ENST00000573895	PRO2289	Q9P1D8	64 aa		6.07	□□□□□ -1.44
ABR-223	ENST00000573895	KRTAP12-1	P59990	96 aa		6.06	□□□□□ -1.44
ABR-223	ENST00000573895	SPINT4	Q6UDR6	99 aa		6.05	□□□□□ -1.44
ABR-223	ENST00000573895		K7ERS5	55 aa		6.02	□□□□□ -1.45
ABR-223	ENST00000573895	KRTAP5-9	P26371	169 aa		6.01	□□□□□ -1.45
ABR-223	ENST00000573895	KRTAP12-2	P59991	146 aa		6.01	□□□□□ -1.45
ABR-223	ENST00000573895	MT1X	P80297	61 aa		6.01	□□□□□ -1.45
ABR-223	ENST00000573895	MUC12	Q9UKN1	5478 aa		5.98	□□□□□ -1.45
ABR-223	ENST00000573895	CAMK2N1	Q7Z7J9	78 aa		5.97	□□□□□ -1.45
ABR-223	ENST00000573895	NEB	P20929	6669 aa		5.95	□□□□□ -1.46
ABR-223	ENST00000573895	BRK1	Q8WUW1	75 aa		5.93	□□□□□ -1.46
ABR-223	ENST00000573895	KMT2D	O14686	5537 aa		5.92	□□□□□ -1.46
ABR-223	ENST00000573895	KRTAP4-12	Q9BQ66	201 aa		5.89	□□□□□ -1.47
ABR-223	ENST00000573895	KRTAP23-1	A1A580	65 aa		5.88	□□□□□ -1.47
ABR-223	ENST00000573895	MDN1	Q9NU22	5596 aa		5.85	□□□□□ -1.47
ABR-223	ENST00000573895	LCE3B	Q5TA77	95 aa		5.84	□□□□□ -1.47
ABR-223	ENST00000573895	PRO0628	Q9UI54	55 aa		5.83	□□□□□ -1.48
ABR-223	ENST00000573895	KRTAP8-1	Q8IUC2	63 aa		5.8	□□□□□ -1.48
ABR-223	ENST00000573895	SPRR2F	Q96RM1	72 aa		5.79	□□□□□ -1.48
ABR-223	ENST00000573895	KRTAP20-1	Q3LI63	56 aa		5.75	□□□□□ -1.49
ABR-223	ENST00000573895	KRTAP10-12	P60413	245 aa		5.74	□□□□□ -1.49
ABR-223	ENST00000573895	C10orf95	Q9H7T3	257 aa		5.74	□□□□□ -1.49
ABR-223	ENST00000573895	KRTAP10-7	P60409	375 aa	Predicted RBP	5.72	□□□□□ -1.49
ABR-223	ENST00000573895	KRTAP4-8	A0A0G2JLE6	195 aa		5.71	□□□□□ -1.5
ABR-223	ENST00000573895	KRTAP9-9	Q9BYP9	154 aa		5.71	□□□□□ -1.5
ABR-223	ENST00000573895	KRTAP9-4	Q9BYQ2	154 aa		5.71	□□□□□ -1.5
ABR-223	ENST00000573895	SPRR2E	P22531	72 aa		5.69	□□□□□ -1.5
ABR-223	ENST00000573895	SPRR2B	P35325	72 aa		5.69	□□□□□ -1.5

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