RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
NPLOC4-212ENST00000573328 H0Y9P7 68 aa4.31□□□□□ -1.72
NPLOC4-212ENST00000573328 A0A087WVE0 104 aa4.3□□□□□ -1.72
NPLOC4-212ENST00000573328 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
NPLOC4-212ENST00000573328 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
NPLOC4-212ENST00000573328 ATOX1O00244 68 aa4.29□□□□□ -1.72
NPLOC4-212ENST00000573328 UQCRQO14949 82 aa4.29□□□□□ -1.72
NPLOC4-212ENST00000573328 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
NPLOC4-212ENST00000573328 NDUFC1O43677 76 aa4.27□□□□□ -1.73
NPLOC4-212ENST00000573328 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
NPLOC4-212ENST00000573328 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
NPLOC4-212ENST00000573328 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
NPLOC4-212ENST00000573328 A8MUN3 132 aa4.22□□□□□ -1.73
NPLOC4-212ENST00000573328 LINC00643Q86TS7 51 aa4.22□□□□□ -1.73
NPLOC4-212ENST00000573328 MP68P56378 58 aa4.21□□□□□ -1.74
NPLOC4-212ENST00000573328 H0YAA0 97 aa4.2□□□□□ -1.74
NPLOC4-212ENST00000573328 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
NPLOC4-212ENST00000573328 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
NPLOC4-212ENST00000573328 OCR1Q9BZK8 76 aa4.16□□□□□ -1.74
NPLOC4-212ENST00000573328 A0A1B0GV90 55 aa4.14□□□□□ -1.75
NPLOC4-212ENST00000573328 NEBP20929 6669 aa4.12□□□□□ -1.75
NPLOC4-212ENST00000573328 R4GN34 69 aa4.12□□□□□ -1.75
NPLOC4-212ENST00000573328 H3BPC8 53 aa4.11□□□□□ -1.75
NPLOC4-212ENST00000573328 J3QR89 54 aa4.11□□□□□ -1.75
NPLOC4-212ENST00000573328 SCGB1A1P11684 91 aa4.11□□□□□ -1.75
NPLOC4-212ENST00000573328 C20orf197Q8N268 126 aa4.11□□□□□ -1.75
NPLOC4-212ENST00000573328 PLAC4Q8WY50 150 aa4.11□□□□□ -1.75
NPLOC4-212ENST00000573328 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
NPLOC4-212ENST00000573328 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
NPLOC4-212ENST00000573328 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
NPLOC4-212ENST00000573328 M0QZ58 72 aa4.08□□□□□ -1.76
NPLOC4-212ENST00000573328 DMAC1Q96GE9 116 aa4.08□□□□□ -1.76
NPLOC4-212ENST00000573328 P0C880 135 aa4.07□□□□□ -1.76
NPLOC4-212ENST00000573328 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
NPLOC4-212ENST00000573328 MT1XP80297 61 aa4.04□□□□□ -1.76
NPLOC4-212ENST00000573328 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
NPLOC4-212ENST00000573328 KMT2DO14686 5537 aa4.02□□□□□ -1.77
NPLOC4-212ENST00000573328 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
NPLOC4-212ENST00000573328 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
NPLOC4-212ENST00000573328 TRAV7A0A075B6U4 112 aa3.99□□□□□ -1.77
NPLOC4-212ENST00000573328 ACYP2P14621 99 aa3.99□□□□□ -1.77
NPLOC4-212ENST00000573328 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
NPLOC4-212ENST00000573328 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
NPLOC4-212ENST00000573328 SPRR2EP22531 72 aa3.98□□□□□ -1.77
NPLOC4-212ENST00000573328 SPRR2BP35325 72 aa3.98□□□□□ -1.77
NPLOC4-212ENST00000573328 SPRR2AP35326 72 aa3.98□□□□□ -1.77
NPLOC4-212ENST00000573328 SPTSSBQ8NFR3 76 aa3.98□□□□□ -1.77
NPLOC4-212ENST00000573328 MT-ATP8P03928 68 aa3.97□□□□□ -1.77
NPLOC4-212ENST00000573328 CHKB-CPT1BH3BT56 60 aa3.96□□□□□ -1.78
NPLOC4-212ENST00000573328 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
NPLOC4-212ENST00000573328 SMIM20Q8N5G0 67 aa3.95□□□□□ -1.78
NPLOC4-212ENST00000573328 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
NPLOC4-212ENST00000573328 PCP4P48539 62 aa3.93□□□□□ -1.78
NPLOC4-212ENST00000573328 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
NPLOC4-212ENST00000573328 K7ERU9 68 aa3.92□□□□□ -1.78
NPLOC4-212ENST00000573328 SNURFQ9Y675 71 aa3.9□□□□□ -1.79
NPLOC4-212ENST00000573328 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
NPLOC4-212ENST00000573328 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
NPLOC4-212ENST00000573328 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
NPLOC4-212ENST00000573328 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
NPLOC4-212ENST00000573328 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
NPLOC4-212ENST00000573328 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
NPLOC4-212ENST00000573328 SPRR2DP22532 72 aa3.85□□□□□ -1.79
NPLOC4-212ENST00000573328 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
NPLOC4-212ENST00000573328 SPANXA2-OT1Q8N9U9 137 aa3.82□□□□□ -1.8
NPLOC4-212ENST00000573328 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
NPLOC4-212ENST00000573328 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
NPLOC4-212ENST00000573328 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
NPLOC4-212ENST00000573328 SERP2Q8N6R1 65 aa3.79□□□□□ -1.8
NPLOC4-212ENST00000573328 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
NPLOC4-212ENST00000573328 COA5Q86WW8 74 aa3.75□□□□□ -1.81
NPLOC4-212ENST00000573328 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
NPLOC4-212ENST00000573328 SEC61GP60059 68 aa3.74□□□□□ -1.81
NPLOC4-212ENST00000573328 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
NPLOC4-212ENST00000573328 SERP1Q9Y6X1 66 aa3.73□□□□□ -1.81
NPLOC4-212ENST00000573328 A0A0D9SG42 100 aa3.71□□□□□ -1.82
NPLOC4-212ENST00000573328 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
NPLOC4-212ENST00000573328 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
NPLOC4-212ENST00000573328 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
NPLOC4-212ENST00000573328 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
NPLOC4-212ENST00000573328 COX7CP15954 63 aa3.65□□□□□ -1.83
NPLOC4-212ENST00000573328 A0A1B0GU33 70 aa3.64□□□□□ -1.83
NPLOC4-212ENST00000573328 H7BZZ5 65 aa3.6□□□□□ -1.83
NPLOC4-212ENST00000573328 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
NPLOC4-212ENST00000573328 MT1EP04732 61 aa3.59□□□□□ -1.83
NPLOC4-212ENST00000573328 CYSTM1Q9H1C7 97 aa3.59□□□□□ -1.83
NPLOC4-212ENST00000573328 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
NPLOC4-212ENST00000573328 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
NPLOC4-212ENST00000573328 A0A1B0GU69 56 aa3.57□□□□□ -1.84
NPLOC4-212ENST00000573328 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
NPLOC4-212ENST00000573328 SMIM26A0A096LP01 95 aa3.56□□□□□ -1.84
NPLOC4-212ENST00000573328 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
NPLOC4-212ENST00000573328 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
NPLOC4-212ENST00000573328 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
NPLOC4-212ENST00000573328 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
NPLOC4-212ENST00000573328 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
NPLOC4-212ENST00000573328 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
NPLOC4-212ENST00000573328 A8MU10 97 aa3.51□□□□□ -1.85
NPLOC4-212ENST00000573328 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
NPLOC4-212ENST00000573328 MT1GP13640 62 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms