RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 K7ERU9 68 aa9.46□□□□□ -0.9
CHMP6-204ENST00000572778 A8MUN3 132 aa9.43□□□□□ -0.9
CHMP6-204ENST00000572778 H3BPC8 53 aa9.41□□□□□ -0.9
CHMP6-204ENST00000572778 NDUFC1O43677 76 aa9.41□□□□□ -0.9
CHMP6-204ENST00000572778 IMUPQ9GZP8 106 aa9.41□□□□□ -0.9
CHMP6-204ENST00000572778 MT-ATP8P03928 68 aa9.4□□□□□ -0.9
CHMP6-204ENST00000572778 KRTAP19-6Q3LI70 58 aa9.39□□□□□ -0.91
CHMP6-204ENST00000572778 FCGBPQ9Y6R7 5405 aaPredicted RBP9.38□□□□□ -0.91
CHMP6-204ENST00000572778 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.37□□□□□ -0.91
CHMP6-204ENST00000572778 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
CHMP6-204ENST00000572778 SMIM20Q8N5G0 67 aa9.25□□□□□ -0.93
CHMP6-204ENST00000572778 TRAV7A0A075B6U4 112 aa9.24□□□□□ -0.93
CHMP6-204ENST00000572778 Q5VV11 94 aa9.24□□□□□ -0.93
CHMP6-204ENST00000572778 H0YAA0 97 aa9.23□□□□□ -0.93
CHMP6-204ENST00000572778 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
CHMP6-204ENST00000572778 CRIPTQ9P021 101 aa9.22□□□□□ -0.93
CHMP6-204ENST00000572778 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
CHMP6-204ENST00000572778 MT1BP07438 61 aa9.21□□□□□ -0.94
CHMP6-204ENST00000572778 KRTAP19-8Q3LI54 63 aa9.21□□□□□ -0.94
CHMP6-204ENST00000572778 ADM2Q7Z4H4 148 aa9.19□□□□□ -0.94
CHMP6-204ENST00000572778 A6NN06 94 aa9.07□□□□□ -0.96
CHMP6-204ENST00000572778 ACYP2P14621 99 aa9.06□□□□□ -0.96
CHMP6-204ENST00000572778 SNURFQ9Y675 71 aa9.06□□□□□ -0.96
CHMP6-204ENST00000572778 MACF1Q9UPN3 7388 aaKnown RBP9.02□□□□□ -0.96
CHMP6-204ENST00000572778 P0C880 135 aa8.99□□□□□ -0.97
CHMP6-204ENST00000572778 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
CHMP6-204ENST00000572778 SERP2Q8N6R1 65 aa8.98□□□□□ -0.97
CHMP6-204ENST00000572778 KRTAP10-5P60370 271 aa8.96□□□□□ -0.98
CHMP6-204ENST00000572778 R4GN34 69 aa8.94□□□□□ -0.98
CHMP6-204ENST00000572778 SPTSSBQ8NFR3 76 aa8.93□□□□□ -0.98
CHMP6-204ENST00000572778 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
CHMP6-204ENST00000572778 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
CHMP6-204ENST00000572778 SYNE2Q8WXH0 6885 aaKnown RBP8.89□□□□□ -0.99
CHMP6-204ENST00000572778 M0QZ58 72 aa8.88□□□□□ -0.99
CHMP6-204ENST00000572778 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
CHMP6-204ENST00000572778 KRTAP6-3Q3LI67 103 aa8.82□□□□□ -1
CHMP6-204ENST00000572778 PLAC4Q8WY50 150 aa8.82□□□□□ -1
CHMP6-204ENST00000572778 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
CHMP6-204ENST00000572778 COX7CP15954 63 aa8.75□□□□□ -1.01
CHMP6-204ENST00000572778 PRO2289Q9P1D8 64 aa8.71□□□□□ -1.02
CHMP6-204ENST00000572778 MT1XP80297 61 aa8.67□□□□□ -1.02
CHMP6-204ENST00000572778 COA5Q86WW8 74 aa8.65□□□□□ -1.02
CHMP6-204ENST00000572778 CYSTM1Q9H1C7 97 aa8.58□□□□□ -1.04
CHMP6-204ENST00000572778 H7BZZ5 65 aa8.57□□□□□ -1.04
CHMP6-204ENST00000572778 ANAPC13Q9BS18 74 aa8.54□□□□□ -1.04
CHMP6-204ENST00000572778 KRTAP5-9P26371 169 aa8.46□□□□□ -1.06
CHMP6-204ENST00000572778 SEC61GP60059 68 aa8.46□□□□□ -1.06
CHMP6-204ENST00000572778 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.06
CHMP6-204ENST00000572778 SERP1Q9Y6X1 66 aa8.44□□□□□ -1.06
CHMP6-204ENST00000572778 MUC12Q9UKN1 5478 aa8.41□□□□□ -1.06
CHMP6-204ENST00000572778 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
CHMP6-204ENST00000572778 KMT2DO14686 5537 aa8.38□□□□□ -1.07
CHMP6-204ENST00000572778 CCDC179H3BU77 68 aa8.37□□□□□ -1.07
CHMP6-204ENST00000572778 KRTAP8-1Q8IUC2 63 aa8.34□□□□□ -1.07
CHMP6-204ENST00000572778 NEBP20929 6669 aa8.34□□□□□ -1.07
CHMP6-204ENST00000572778 SPRR2FQ96RM1 72 aa8.31□□□□□ -1.08
CHMP6-204ENST00000572778 KRTAP10-7P60409 375 aaPredicted RBP8.3□□□□□ -1.08
CHMP6-204ENST00000572778 A0A1B0GU33 70 aa8.28□□□□□ -1.08
CHMP6-204ENST00000572778 A0A0D9SG42 100 aa8.27□□□□□ -1.09
CHMP6-204ENST00000572778 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.09
CHMP6-204ENST00000572778 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.09
CHMP6-204ENST00000572778 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
CHMP6-204ENST00000572778 SPATA8Q6RVD6 105 aa8.26□□□□□ -1.09
CHMP6-204ENST00000572778 KRTAP10-12P60413 245 aa8.23□□□□□ -1.09
CHMP6-204ENST00000572778 A0A1B0GU69 56 aa8.21□□□□□ -1.1
CHMP6-204ENST00000572778 MDN1Q9NU22 5596 aa8.2□□□□□ -1.1
CHMP6-204ENST00000572778 ATP5EP56381 51 aaPredicted RBP8.2□□□□□ -1.1
CHMP6-204ENST00000572778 SPRR2EP22531 72 aa8.14□□□□□ -1.11
CHMP6-204ENST00000572778 SPRR2BP35325 72 aa8.14□□□□□ -1.11
CHMP6-204ENST00000572778 SPRR2AP35326 72 aa8.14□□□□□ -1.11
CHMP6-204ENST00000572778 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
CHMP6-204ENST00000572778 KRTAP20-1Q3LI63 56 aa8.1□□□□□ -1.11
CHMP6-204ENST00000572778 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
CHMP6-204ENST00000572778 SMIM26A0A096LP01 95 aa8.05□□□□□ -1.12
CHMP6-204ENST00000572778 TMEM258P61165 79 aa8.04□□□□□ -1.12
CHMP6-204ENST00000572778 LCE1AQ5T7P2 110 aa8.03□□□□□ -1.12
CHMP6-204ENST00000572778 PRR15LQ9BU68 103 aa8.02□□□□□ -1.13
CHMP6-204ENST00000572778 A8MU10 97 aa7.99□□□□□ -1.13
CHMP6-204ENST00000572778 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
CHMP6-204ENST00000572778 KRTAP2-3P0C7H8 128 aa7.93□□□□□ -1.14
CHMP6-204ENST00000572778 KRTAP2-4Q9BYR9 128 aa7.93□□□□□ -1.14
CHMP6-204ENST00000572778 SPRR2DP22532 72 aa7.87□□□□□ -1.15
CHMP6-204ENST00000572778 UQCR11O14957 56 aa7.75□□□□□ -1.17
CHMP6-204ENST00000572778 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
CHMP6-204ENST00000572778 KRTAP2-2Q9BYT5 123 aa7.69□□□□□ -1.18
CHMP6-204ENST00000572778 KRTAP2-1Q9BYU5 128 aa7.69□□□□□ -1.18
CHMP6-204ENST00000572778 C10orf95Q9H7T3 257 aa7.69□□□□□ -1.18
CHMP6-204ENST00000572778 MT1EP04732 61 aa7.68□□□□□ -1.18
CHMP6-204ENST00000572778 TNP1P09430 55 aa7.65□□□□□ -1.18
CHMP6-204ENST00000572778 LCE3BQ5TA77 95 aa7.64□□□□□ -1.19
CHMP6-204ENST00000572778 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
CHMP6-204ENST00000572778 MIR22HGQ0VDD5 57 aa7.59□□□□□ -1.19
CHMP6-204ENST00000572778 V9GYY9 64 aa7.59□□□□□ -1.19
CHMP6-204ENST00000572778 KRTAP19-3Q7Z4W3 81 aa7.58□□□□□ -1.2
CHMP6-204ENST00000572778 LCE5AQ5TCM9 118 aa7.56□□□□□ -1.2
CHMP6-204ENST00000572778 PSPHP1O15172 72 aa7.55□□□□□ -1.2
CHMP6-204ENST00000572778 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
CHMP6-204ENST00000572778 Q1T7F1 81 aa7.53□□□□□ -1.2
CHMP6-204ENST00000572778 K7ERS5 55 aa7.44□□□□□ -1.22
CHMP6-204ENST00000572778 MT1GP13640 62 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms