RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
NDE1-205ENST00000572756 KLKP1Q107X0 134 aa7.26□□□□□ -1.25
NDE1-205ENST00000572756 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
NDE1-205ENST00000572756 J3QR89 54 aa7.25□□□□□ -1.25
NDE1-205ENST00000572756 MT1BP07438 61 aa7.24□□□□□ -1.25
NDE1-205ENST00000572756 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
NDE1-205ENST00000572756 MACF1Q9UPN3 7388 aaKnown RBP7.24□□□□□ -1.25
NDE1-205ENST00000572756 A8MUN3 132 aa7.22□□□□□ -1.25
NDE1-205ENST00000572756 MP68P56378 58 aa7.21□□□□□ -1.26
NDE1-205ENST00000572756 Q5VV11 94 aa7.2□□□□□ -1.26
NDE1-205ENST00000572756 NDUFC1O43677 76 aa7.19□□□□□ -1.26
NDE1-205ENST00000572756 H0YAA0 97 aa7.17□□□□□ -1.26
NDE1-205ENST00000572756 IMUPQ9GZP8 106 aa7.17□□□□□ -1.26
NDE1-205ENST00000572756 CRIPTQ9P021 101 aa7.15□□□□□ -1.26
NDE1-205ENST00000572756 H3BPC8 53 aa7.14□□□□□ -1.27
NDE1-205ENST00000572756 SYNE2Q8WXH0 6885 aaKnown RBP7.1□□□□□ -1.27
NDE1-205ENST00000572756 A6NN06 94 aa7.09□□□□□ -1.27
NDE1-205ENST00000572756 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
NDE1-205ENST00000572756 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
NDE1-205ENST00000572756 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
NDE1-205ENST00000572756 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
NDE1-205ENST00000572756 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
NDE1-205ENST00000572756 KRTAP6-3Q3LI67 103 aa7.03□□□□□ -1.28
NDE1-205ENST00000572756 K7ERU9 68 aa7□□□□□ -1.29
NDE1-205ENST00000572756 TRAV7A0A075B6U4 112 aa6.95□□□□□ -1.3
NDE1-205ENST00000572756 SMIM20Q8N5G0 67 aa6.94□□□□□ -1.3
NDE1-205ENST00000572756 P0C880 135 aa6.93□□□□□ -1.3
NDE1-205ENST00000572756 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
NDE1-205ENST00000572756 ACYP2P14621 99 aa6.86□□□□□ -1.31
NDE1-205ENST00000572756 R4GN34 69 aa6.85□□□□□ -1.31
NDE1-205ENST00000572756 M0QZ58 72 aa6.8□□□□□ -1.32
NDE1-205ENST00000572756 MT1XP80297 61 aa6.8□□□□□ -1.32
NDE1-205ENST00000572756 SNURFQ9Y675 71 aa6.79□□□□□ -1.32
NDE1-205ENST00000572756 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
NDE1-205ENST00000572756 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
NDE1-205ENST00000572756 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
NDE1-205ENST00000572756 SPTSSBQ8NFR3 76 aa6.75□□□□□ -1.33
NDE1-205ENST00000572756 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
NDE1-205ENST00000572756 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
NDE1-205ENST00000572756 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
NDE1-205ENST00000572756 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
NDE1-205ENST00000572756 LINC01554Q52M75 96 aa6.69□□□□□ -1.34
NDE1-205ENST00000572756 NEBP20929 6669 aa6.69□□□□□ -1.34
NDE1-205ENST00000572756 KMT2DO14686 5537 aa6.66□□□□□ -1.34
NDE1-205ENST00000572756 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
NDE1-205ENST00000572756 H3BS24 57 aa6.62□□□□□ -1.35
NDE1-205ENST00000572756 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
NDE1-205ENST00000572756 COX7CP15954 63 aa6.53□□□□□ -1.36
NDE1-205ENST00000572756 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
NDE1-205ENST00000572756 SPRR2FQ96RM1 72 aa6.52□□□□□ -1.37
NDE1-205ENST00000572756 COA5Q86WW8 74 aa6.51□□□□□ -1.37
NDE1-205ENST00000572756 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
NDE1-205ENST00000572756 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
NDE1-205ENST00000572756 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
NDE1-205ENST00000572756 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
NDE1-205ENST00000572756 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
NDE1-205ENST00000572756 KRTAP20-1Q3LI63 56 aa6.46□□□□□ -1.38
NDE1-205ENST00000572756 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
NDE1-205ENST00000572756 H7BZZ5 65 aa6.44□□□□□ -1.38
NDE1-205ENST00000572756 SPRR2EP22531 72 aa6.42□□□□□ -1.38
NDE1-205ENST00000572756 SPRR2BP35325 72 aa6.42□□□□□ -1.38
NDE1-205ENST00000572756 SPRR2AP35326 72 aa6.42□□□□□ -1.38
NDE1-205ENST00000572756 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
NDE1-205ENST00000572756 SEC61GP60059 68 aa6.34□□□□□ -1.39
NDE1-205ENST00000572756 SERP1Q9Y6X1 66 aa6.33□□□□□ -1.4
NDE1-205ENST00000572756 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
NDE1-205ENST00000572756 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
NDE1-205ENST00000572756 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
NDE1-205ENST00000572756 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
NDE1-205ENST00000572756 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
NDE1-205ENST00000572756 A0A1B0GU33 70 aa6.26□□□□□ -1.41
NDE1-205ENST00000572756 A0A0D9SG42 100 aa6.25□□□□□ -1.41
NDE1-205ENST00000572756 SPRR2DP22532 72 aa6.2□□□□□ -1.42
NDE1-205ENST00000572756 CCDC179H3BU77 68 aa6.19□□□□□ -1.42
NDE1-205ENST00000572756 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
NDE1-205ENST00000572756 A0A1B0GU69 56 aa6.16□□□□□ -1.42
NDE1-205ENST00000572756 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.42
NDE1-205ENST00000572756 KRTAP2-2Q9BYT5 123 aa6.13□□□□□ -1.43
NDE1-205ENST00000572756 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
NDE1-205ENST00000572756 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
NDE1-205ENST00000572756 KRTAP19-7Q3SYF9 63 aa6.09□□□□□ -1.43
NDE1-205ENST00000572756 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
NDE1-205ENST00000572756 A8MU10 97 aa6.05□□□□□ -1.44
NDE1-205ENST00000572756 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
NDE1-205ENST00000572756 MT1EP04732 61 aa6.02□□□□□ -1.45
NDE1-205ENST00000572756 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
NDE1-205ENST00000572756 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
NDE1-205ENST00000572756 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
NDE1-205ENST00000572756 TMEM258P61165 79 aa5.95□□□□□ -1.46
NDE1-205ENST00000572756 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
NDE1-205ENST00000572756 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
NDE1-205ENST00000572756 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
NDE1-205ENST00000572756 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
NDE1-205ENST00000572756 TNP1P09430 55 aa5.83□□□□□ -1.48
NDE1-205ENST00000572756 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
NDE1-205ENST00000572756 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
NDE1-205ENST00000572756 MT1GP13640 62 aa5.81□□□□□ -1.48
NDE1-205ENST00000572756 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
NDE1-205ENST00000572756 UQCR11O14957 56 aa5.8□□□□□ -1.48
NDE1-205ENST00000572756 MT1LQ93083 61 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms