RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 KRTAP10-3P60369 221 aa3.39□□□□□ -1.87
KARS-211ENST00000569298 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
KARS-211ENST00000569298 Q6ZRN7 208 aaPredicted RBP3.39□□□□□ -1.87
KARS-211ENST00000569298 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
KARS-211ENST00000569298 RYR3Q15413 4870 aa3.39□□□□□ -1.87
KARS-211ENST00000569298 DEFB135Q30KP9 77 aa3.37□□□□□ -1.87
KARS-211ENST00000569298 DNAH9Q9NYC9 4486 aa3.36□□□□□ -1.87
KARS-211ENST00000569298 S4R3F8 94 aa3.35□□□□□ -1.87
KARS-211ENST00000569298 STAB2Q8WWQ8 2551 aa3.35□□□□□ -1.87
KARS-211ENST00000569298 DEFB4AO15263 64 aa3.34□□□□□ -1.87
KARS-211ENST00000569298 SPINK6Q6UWN8 80 aa3.34□□□□□ -1.87
KARS-211ENST00000569298 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
KARS-211ENST00000569298 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
KARS-211ENST00000569298 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
KARS-211ENST00000569298 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
KARS-211ENST00000569298 UBE2DNLQ8IWF7 75 aa3.3□□□□□ -1.88
KARS-211ENST00000569298 TENM2Q9NT68 2774 aa3.3□□□□□ -1.88
KARS-211ENST00000569298 RYR2Q92736 4967 aa3.3□□□□□ -1.88
KARS-211ENST00000569298 FLG2Q5D862 2391 aaPredicted RBP3.3□□□□□ -1.88
KARS-211ENST00000569298 SACSQ9NZJ4 4579 aa3.29□□□□□ -1.88
KARS-211ENST00000569298 MT3P25713 68 aa3.29□□□□□ -1.88
KARS-211ENST00000569298 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
KARS-211ENST00000569298 R4GN34 69 aa3.29□□□□□ -1.88
KARS-211ENST00000569298 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.88
KARS-211ENST00000569298 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
KARS-211ENST00000569298 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
KARS-211ENST00000569298 LYSTQ99698 3801 aa3.27□□□□□ -1.89
KARS-211ENST00000569298 DYNC2H1Q8NCM8 4307 aaKnown RBP3.26□□□□□ -1.89
KARS-211ENST00000569298 STARD9Q9P2P6 4700 aa3.26□□□□□ -1.89
KARS-211ENST00000569298 CSMD3Q7Z407 3707 aa3.26□□□□□ -1.89
KARS-211ENST00000569298 APLNQ9ULZ1 77 aa3.26□□□□□ -1.89
KARS-211ENST00000569298 EPPK1P58107 5090 aaKnown RBP3.25□□□□□ -1.89
KARS-211ENST00000569298 PLECQ15149 4684 aaKnown RBP3.25□□□□□ -1.89
KARS-211ENST00000569298 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
KARS-211ENST00000569298 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
KARS-211ENST00000569298 DNAH1Q9P2D7 4330 aa3.23□□□□□ -1.89
KARS-211ENST00000569298 BIRC6Q9NR09 4857 aa3.22□□□□□ -1.89
KARS-211ENST00000569298 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
KARS-211ENST00000569298 M0QZ58 72 aa3.22□□□□□ -1.89
KARS-211ENST00000569298 HYDINQ4G0P3 5121 aa3.22□□□□□ -1.89
KARS-211ENST00000569298 A0A0D9SG42 100 aa3.2□□□□□ -1.9
KARS-211ENST00000569298 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
KARS-211ENST00000569298 FRAS1Q86XX4 4008 aa3.18□□□□□ -1.9
KARS-211ENST00000569298 RYR1P21817 5038 aa3.16□□□□□ -1.9
KARS-211ENST00000569298 KMT2AQ03164 3969 aa3.15□□□□□ -1.9
KARS-211ENST00000569298 HECTD4Q9Y4D8 3996 aa3.14□□□□□ -1.91
KARS-211ENST00000569298 DNAH10Q8IVF4 4471 aa3.13□□□□□ -1.91
KARS-211ENST00000569298 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
KARS-211ENST00000569298 PCLOQ9Y6V0 5065 aa3.12□□□□□ -1.91
KARS-211ENST00000569298 HERC2O95714 4834 aa3.12□□□□□ -1.91
KARS-211ENST00000569298 PKHD1P08F94 4074 aa3.11□□□□□ -1.91
KARS-211ENST00000569298 DNAH2Q9P225 4427 aa3.1□□□□□ -1.91
KARS-211ENST00000569298 DNAH6Q9C0G6 4158 aa3.08□□□□□ -1.92
KARS-211ENST00000569298 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
KARS-211ENST00000569298 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
KARS-211ENST00000569298 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
KARS-211ENST00000569298 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
KARS-211ENST00000569298 Q5VSD8 79 aa3.06□□□□□ -1.92
KARS-211ENST00000569298 DNAH17Q9UFH2 4485 aa3.05□□□□□ -1.92
KARS-211ENST00000569298 ABCA13Q86UQ4 5058 aa3.04□□□□□ -1.92
KARS-211ENST00000569298 PKD1P98161 4303 aa3.04□□□□□ -1.92
KARS-211ENST00000569298 DYNC1H1Q14204 4646 aaKnown RBP3.03□□□□□ -1.92
KARS-211ENST00000569298 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
KARS-211ENST00000569298 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
KARS-211ENST00000569298 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
KARS-211ENST00000569298 HSPG2P98160 4391 aa2.99□□□□□ -1.93
KARS-211ENST00000569298 DNAH5Q8TE73 4624 aa2.99□□□□□ -1.93
KARS-211ENST00000569298 HERC1Q15751 4861 aa2.98□□□□□ -1.93
KARS-211ENST00000569298 SRRM2Q9UQ35 2752 aaKnown RBP2.97□□□□□ -1.93
KARS-211ENST00000569298 APOBP04114 4563 aaKnown RBP2.96□□□□□ -1.94
KARS-211ENST00000569298 KRTAP1-4P0C5Y4 121 aa2.96□□□□□ -1.94
KARS-211ENST00000569298 A0A1B0GVY2 172 aa2.94□□□□□ -1.94
KARS-211ENST00000569298 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
KARS-211ENST00000569298 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
KARS-211ENST00000569298 FAT1Q14517 4588 aa2.92□□□□□ -1.94
KARS-211ENST00000569298 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
KARS-211ENST00000569298 DMBT1Q9UGM3 2413 aaPredicted RBP2.89□□□□□ -1.95
KARS-211ENST00000569298 VPS13BQ7Z7G8 4022 aa2.89□□□□□ -1.95
KARS-211ENST00000569298 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
KARS-211ENST00000569298 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
KARS-211ENST00000569298 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
KARS-211ENST00000569298 TNP1P09430 55 aa2.83□□□□□ -1.96
KARS-211ENST00000569298 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
KARS-211ENST00000569298 C9orf92A6NGG3 77 aa2.81□□□□□ -1.96
KARS-211ENST00000569298 UBR4Q5T4S7 5183 aa2.8□□□□□ -1.96
KARS-211ENST00000569298 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
KARS-211ENST00000569298 LRP1Q07954 4544 aaKnown RBP2.79□□□□□ -1.96
KARS-211ENST00000569298 SMR3BP02814 79 aaPredicted RBP2.78□□□□□ -1.96
KARS-211ENST00000569298 FAT3Q8TDW7 4589 aa2.78□□□□□ -1.97
KARS-211ENST00000569298 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
KARS-211ENST00000569298 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
KARS-211ENST00000569298 PKHD1L1Q86WI1 4243 aa2.73□□□□□ -1.97
KARS-211ENST00000569298 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
KARS-211ENST00000569298 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
KARS-211ENST00000569298 LRP2P98164 4655 aa2.71□□□□□ -1.98
KARS-211ENST00000569298 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
KARS-211ENST00000569298 TNXBP22105 4242 aa2.69□□□□□ -1.98
KARS-211ENST00000569298 KRTAP10-4P60372 401 aaPredicted RBP2.68□□□□□ -1.98
KARS-211ENST00000569298 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
KARS-211ENST00000569298 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms