RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 HSPG2P98160 4391 aa9.62□□□□□ -0.87
PKD1-235ENST00000568591 COX6B2Q6YFQ2 88 aa9.59□□□□□ -0.87
PKD1-235ENST00000568591 TNXBP22105 4242 aa9.58□□□□□ -0.88
PKD1-235ENST00000568591 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
PKD1-235ENST00000568591 KRTAP25-1Q3LHN0 102 aa9.54□□□□□ -0.88
PKD1-235ENST00000568591 P0C880 135 aa9.5□□□□□ -0.89
PKD1-235ENST00000568591 CRIPTQ9P021 101 aa9.47□□□□□ -0.89
PKD1-235ENST00000568591 KRTAP10-8P60410 259 aa9.46□□□□□ -0.9
PKD1-235ENST00000568591 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
PKD1-235ENST00000568591 KRTAP10-6P60371 365 aaPredicted RBP9.41□□□□□ -0.9
PKD1-235ENST00000568591 KRTAP13-4Q3LI77 160 aa9.4□□□□□ -0.9
PKD1-235ENST00000568591 LPAP08519 4548 aa9.38□□□□□ -0.91
PKD1-235ENST00000568591 RYR3Q15413 4870 aa9.36□□□□□ -0.91
PKD1-235ENST00000568591 XP32Q5T750 250 aa9.35□□□□□ -0.91
PKD1-235ENST00000568591 RPL37P61927 97 aaKnown RBP9.35□□□□□ -0.91
PKD1-235ENST00000568591 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
PKD1-235ENST00000568591 A0A0D9SG42 100 aa9.34□□□□□ -0.91
PKD1-235ENST00000568591 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
PKD1-235ENST00000568591 Q5VSD8 79 aa9.33□□□□□ -0.92
PKD1-235ENST00000568591 K7ERS5 55 aa9.28□□□□□ -0.92
PKD1-235ENST00000568591 RYR1P21817 5038 aa9.27□□□□□ -0.93
PKD1-235ENST00000568591 S4R3F8 94 aa9.26□□□□□ -0.93
PKD1-235ENST00000568591 KIAA1109Q2LD37 5005 aa9.24□□□□□ -0.93
PKD1-235ENST00000568591 LRP2P98164 4655 aa9.22□□□□□ -0.93
PKD1-235ENST00000568591 NDUFAF8A1L188 74 aa9.18□□□□□ -0.94
PKD1-235ENST00000568591 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
PKD1-235ENST00000568591 SPINT4Q6UDR6 99 aa9.1□□□□□ -0.95
PKD1-235ENST00000568591 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
PKD1-235ENST00000568591 KRTAP12-2P59991 146 aa9.08□□□□□ -0.96
PKD1-235ENST00000568591 C10orf95Q9H7T3 257 aa9.07□□□□□ -0.96
PKD1-235ENST00000568591 EPPK1P58107 5090 aaKnown RBP9.02□□□□□ -0.97
PKD1-235ENST00000568591 ABCA13Q86UQ4 5058 aa9.01□□□□□ -0.97
PKD1-235ENST00000568591 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
PKD1-235ENST00000568591 KRTAP15-1Q3LI76 137 aa8.94□□□□□ -0.98
PKD1-235ENST00000568591 LUZP6Q538Z0 58 aa8.92□□□□□ -0.98
PKD1-235ENST00000568591 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
PKD1-235ENST00000568591 M0QZ58 72 aa8.75□□□□□ -1.01
PKD1-235ENST00000568591 MUC17Q685J3 4493 aa8.69□□□□□ -1.02
PKD1-235ENST00000568591 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
PKD1-235ENST00000568591 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
PKD1-235ENST00000568591 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
PKD1-235ENST00000568591 R4GN34 69 aa8.62□□□□□ -1.03
PKD1-235ENST00000568591 BIRC6Q9NR09 4857 aa8.61□□□□□ -1.03
PKD1-235ENST00000568591 MUC2Q02817 5179 aa8.56□□□□□ -1.04
PKD1-235ENST00000568591 HERC2O95714 4834 aa8.49□□□□□ -1.05
PKD1-235ENST00000568591 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
PKD1-235ENST00000568591 J3QL48 77 aa8.4□□□□□ -1.06
PKD1-235ENST00000568591 PCLOQ9Y6V0 5065 aa8.3□□□□□ -1.08
PKD1-235ENST00000568591 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.1
PKD1-235ENST00000568591 FLGP20930 4061 aaPredicted RBP8.19□□□□□ -1.1
PKD1-235ENST00000568591 PLAC4Q8WY50 150 aa8.19□□□□□ -1.1
PKD1-235ENST00000568591 HERC1Q15751 4861 aa8.15□□□□□ -1.1
PKD1-235ENST00000568591 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
PKD1-235ENST00000568591 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
PKD1-235ENST00000568591 PP632Q6XCG6 107 aa7.96□□□□□ -1.13
PKD1-235ENST00000568591 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
PKD1-235ENST00000568591 TNP1P09430 55 aa7.86□□□□□ -1.15
PKD1-235ENST00000568591 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
PKD1-235ENST00000568591 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
PKD1-235ENST00000568591 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
PKD1-235ENST00000568591 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.18
PKD1-235ENST00000568591 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
PKD1-235ENST00000568591 M0R2T5 61 aa7.67□□□□□ -1.18
PKD1-235ENST00000568591 KRTAP23-1A1A580 65 aa7.62□□□□□ -1.19
PKD1-235ENST00000568591 MT1HP80294 61 aa7.62□□□□□ -1.19
PKD1-235ENST00000568591 MT1FP04733 61 aa7.58□□□□□ -1.2
PKD1-235ENST00000568591 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
PKD1-235ENST00000568591 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
PKD1-235ENST00000568591 MT2AP02795 61 aa7.54□□□□□ -1.2
PKD1-235ENST00000568591 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
PKD1-235ENST00000568591 KRTAP9-8Q9BYQ0 159 aa7.47□□□□□ -1.21
PKD1-235ENST00000568591 INE1O15225 51 aa7.34□□□□□ -1.23
PKD1-235ENST00000568591 MT1BP07438 61 aa7.33□□□□□ -1.24
PKD1-235ENST00000568591 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
PKD1-235ENST00000568591 KRTAP19-8Q3LI54 63 aa7.32□□□□□ -1.24
PKD1-235ENST00000568591 MT1XP80297 61 aa7.31□□□□□ -1.24
PKD1-235ENST00000568591 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
PKD1-235ENST00000568591 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
PKD1-235ENST00000568591 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
PKD1-235ENST00000568591 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
PKD1-235ENST00000568591 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
PKD1-235ENST00000568591 USH2AO75445 5202 aa7.08□□□□□ -1.28
PKD1-235ENST00000568591 KMT2DO14686 5537 aa7.01□□□□□ -1.29
PKD1-235ENST00000568591 LCE2BO14633 110 aa6.9□□□□□ -1.31
PKD1-235ENST00000568591 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
PKD1-235ENST00000568591 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
PKD1-235ENST00000568591 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
PKD1-235ENST00000568591 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
PKD1-235ENST00000568591 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.34
PKD1-235ENST00000568591 KRTAP9-6A8MVA2 160 aa6.62□□□□□ -1.35
PKD1-235ENST00000568591 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
PKD1-235ENST00000568591 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
PKD1-235ENST00000568591 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
PKD1-235ENST00000568591 SSPOA2VEC9 5147 aa6.36□□□□□ -1.39
PKD1-235ENST00000568591 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
PKD1-235ENST00000568591 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
PKD1-235ENST00000568591 MT1LQ93083 61 aa6.31□□□□□ -1.4
PKD1-235ENST00000568591 MT1EP04732 61 aa6.29□□□□□ -1.4
PKD1-235ENST00000568591 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
PKD1-235ENST00000568591 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms