RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
COMMD4-223ENST00000568301 CSAG1Q6PB30 78 aa6.76□□□□□ -1.33
COMMD4-223ENST00000568301 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
COMMD4-223ENST00000568301 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
COMMD4-223ENST00000568301 S4R3F8 94 aa6.73□□□□□ -1.33
COMMD4-223ENST00000568301 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
COMMD4-223ENST00000568301 LCA10Q71F78 164 aa6.69□□□□□ -1.34
COMMD4-223ENST00000568301 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
COMMD4-223ENST00000568301 A0A087WVE0 104 aa6.68□□□□□ -1.34
COMMD4-223ENST00000568301 UQCRQO14949 82 aa6.66□□□□□ -1.34
COMMD4-223ENST00000568301 KLKP1Q107X0 134 aa6.66□□□□□ -1.34
COMMD4-223ENST00000568301 MT-ATP8P03928 68 aa6.63□□□□□ -1.35
COMMD4-223ENST00000568301 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
COMMD4-223ENST00000568301 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
COMMD4-223ENST00000568301 TRAV22A0A0B4J277 110 aa6.61□□□□□ -1.35
COMMD4-223ENST00000568301 OCR1Q9BZK8 76 aa6.6□□□□□ -1.35
COMMD4-223ENST00000568301 ATOX1O00244 68 aa6.59□□□□□ -1.35
COMMD4-223ENST00000568301 CRIPTQ9P021 101 aa6.59□□□□□ -1.35
COMMD4-223ENST00000568301 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
COMMD4-223ENST00000568301 SCGB1A1P11684 91 aa6.57□□□□□ -1.36
COMMD4-223ENST00000568301 LOC101927531A0A1B0GV80 90 aa6.56□□□□□ -1.36
COMMD4-223ENST00000568301 SMIM20Q8N5G0 67 aa6.55□□□□□ -1.36
COMMD4-223ENST00000568301 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
COMMD4-223ENST00000568301 H0Y9P7 68 aa6.53□□□□□ -1.36
COMMD4-223ENST00000568301 H3BPC8 53 aa6.53□□□□□ -1.36
COMMD4-223ENST00000568301 MP68P56378 58 aa6.52□□□□□ -1.37
COMMD4-223ENST00000568301 TRAV7A0A075B6U4 112 aa6.47□□□□□ -1.37
COMMD4-223ENST00000568301 SPRR2EP22531 72 aa6.47□□□□□ -1.37
COMMD4-223ENST00000568301 SPRR2BP35325 72 aa6.47□□□□□ -1.37
COMMD4-223ENST00000568301 SPRR2AP35326 72 aa6.47□□□□□ -1.37
COMMD4-223ENST00000568301 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
COMMD4-223ENST00000568301 SPRR2FQ96RM1 72 aa6.46□□□□□ -1.38
COMMD4-223ENST00000568301 H0YAA0 97 aa6.42□□□□□ -1.38
COMMD4-223ENST00000568301 KRTAP2-2Q9BYT5 123 aa6.39□□□□□ -1.39
COMMD4-223ENST00000568301 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
COMMD4-223ENST00000568301 NDUFC1O43677 76 aa6.38□□□□□ -1.39
COMMD4-223ENST00000568301 SERP2Q8N6R1 65 aa6.38□□□□□ -1.39
COMMD4-223ENST00000568301 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
COMMD4-223ENST00000568301 A8MUN3 132 aa6.36□□□□□ -1.39
COMMD4-223ENST00000568301 LCE1AQ5T7P2 110 aa6.33□□□□□ -1.4
COMMD4-223ENST00000568301 MT1XP80297 61 aa6.32□□□□□ -1.4
COMMD4-223ENST00000568301 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
COMMD4-223ENST00000568301 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
COMMD4-223ENST00000568301 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
COMMD4-223ENST00000568301 COX7CP15954 63 aa6.27□□□□□ -1.41
COMMD4-223ENST00000568301 SPRR2DP22532 72 aa6.25□□□□□ -1.41
COMMD4-223ENST00000568301 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
COMMD4-223ENST00000568301 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
COMMD4-223ENST00000568301 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
COMMD4-223ENST00000568301 SNURFQ9Y675 71 aa6.23□□□□□ -1.41
COMMD4-223ENST00000568301 SPANXA2-OT1Q8N9U9 137 aa6.22□□□□□ -1.41
COMMD4-223ENST00000568301 ACYP2P14621 99 aa6.19□□□□□ -1.42
COMMD4-223ENST00000568301 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
COMMD4-223ENST00000568301 R4GN34 69 aa6.17□□□□□ -1.42
COMMD4-223ENST00000568301 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
COMMD4-223ENST00000568301 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
COMMD4-223ENST00000568301 P0C880 135 aa6.12□□□□□ -1.43
COMMD4-223ENST00000568301 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
COMMD4-223ENST00000568301 M0QZ58 72 aa6.1□□□□□ -1.43
COMMD4-223ENST00000568301 H7BZZ5 65 aa6.09□□□□□ -1.43
COMMD4-223ENST00000568301 SPTSSBQ8NFR3 76 aa6.06□□□□□ -1.44
COMMD4-223ENST00000568301 GPR98Q8WXG9 6306 aa6.04□□□□□ -1.44
COMMD4-223ENST00000568301 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
COMMD4-223ENST00000568301 CYSTM1Q9H1C7 97 aa6.03□□□□□ -1.44
COMMD4-223ENST00000568301 CCDC179H3BU77 68 aa6.02□□□□□ -1.45
COMMD4-223ENST00000568301 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
COMMD4-223ENST00000568301 LINC01554Q52M75 96 aa6.02□□□□□ -1.45
COMMD4-223ENST00000568301 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
COMMD4-223ENST00000568301 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
COMMD4-223ENST00000568301 DSTQ03001 7570 aaKnown RBP5.95□□□□□ -1.46
COMMD4-223ENST00000568301 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
COMMD4-223ENST00000568301 COA5Q86WW8 74 aa5.94□□□□□ -1.46
COMMD4-223ENST00000568301 TMEM258P61165 79 aa5.88□□□□□ -1.47
COMMD4-223ENST00000568301 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
COMMD4-223ENST00000568301 SEC61GP60059 68 aa5.77□□□□□ -1.49
COMMD4-223ENST00000568301 SERP1Q9Y6X1 66 aa5.74□□□□□ -1.49
COMMD4-223ENST00000568301 PCP4P48539 62 aa5.73□□□□□ -1.49
COMMD4-223ENST00000568301 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
COMMD4-223ENST00000568301 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
COMMD4-223ENST00000568301 A0A1B0GU69 56 aa5.65□□□□□ -1.5
COMMD4-223ENST00000568301 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
COMMD4-223ENST00000568301 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
COMMD4-223ENST00000568301 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
COMMD4-223ENST00000568301 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
COMMD4-223ENST00000568301 A0A1B0GU33 70 aa5.62□□□□□ -1.51
COMMD4-223ENST00000568301 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
COMMD4-223ENST00000568301 MT1EP04732 61 aa5.61□□□□□ -1.51
COMMD4-223ENST00000568301 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
COMMD4-223ENST00000568301 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
COMMD4-223ENST00000568301 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
COMMD4-223ENST00000568301 V9GYY9 64 aa5.55□□□□□ -1.52
COMMD4-223ENST00000568301 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
COMMD4-223ENST00000568301 MT4P47944 62 aa5.52□□□□□ -1.53
COMMD4-223ENST00000568301 SMIM26A0A096LP01 95 aa5.51□□□□□ -1.53
COMMD4-223ENST00000568301 Q1T7F1 81 aa5.51□□□□□ -1.53
COMMD4-223ENST00000568301 MT1GP13640 62 aa5.5□□□□□ -1.53
COMMD4-223ENST00000568301 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
COMMD4-223ENST00000568301 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
COMMD4-223ENST00000568301 A0A0D9SG42 100 aa5.46□□□□□ -1.54
COMMD4-223ENST00000568301 UQCR11O14957 56 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms