RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 ITPR1Q14643 2758 aa0.3□□□□□ -2.36
TCF4-239ENST00000568186 TEP1Q99973 2627 aaKnown RBP0.3□□□□□ -2.36
TCF4-239ENST00000568186 FLGP20930 4061 aaPredicted RBP0.3□□□□□ -2.36
TCF4-239ENST00000568186 ACACBO00763 2458 aa0.3□□□□□ -2.36
TCF4-239ENST00000568186 MXRA5Q9NR99 2828 aa0.3□□□□□ -2.36
TCF4-239ENST00000568186 SPG11Q96JI7 2443 aa0.29□□□□□ -2.36
TCF4-239ENST00000568186 COL12A1Q99715 3063 aa0.29□□□□□ -2.36
TCF4-239ENST00000568186 RNF213Q63HN8 5207 aa0.29□□□□□ -2.36
TCF4-239ENST00000568186 HRNRQ86YZ3 2850 aaPredicted RBP0.29□□□□□ -2.36
TCF4-239ENST00000568186 EPG5Q9HCE0 2579 aa0.29□□□□□ -2.36
TCF4-239ENST00000568186 DNAH7Q8WXX0 4024 aa0.29□□□□□ -2.36
TCF4-239ENST00000568186 SPRR2BP35325 72 aa0.29□□□□□ -2.36
TCF4-239ENST00000568186 ZFHX4Q86UP3 3567 aa0.29□□□□□ -2.36
TCF4-239ENST00000568186 TLN2Q9Y4G6 2542 aa0.29□□□□□ -2.36
TCF4-239ENST00000568186 CELSR3Q9NYQ7 3312 aa0.28□□□□□ -2.36
TCF4-239ENST00000568186 LAMA1P25391 3075 aa0.28□□□□□ -2.36
TCF4-239ENST00000568186 UTP20O75691 2785 aaKnown RBP0.28□□□□□ -2.36
TCF4-239ENST00000568186 A0A096LNI7 61 aa0.28□□□□□ -2.36
TCF4-239ENST00000568186 RHPN1-AS1Q9BWJ2 59 aa0.28□□□□□ -2.36
TCF4-239ENST00000568186 MAP1AP78559 2803 aaPredicted RBP0.28□□□□□ -2.36
TCF4-239ENST00000568186 MAST4O15021 2626 aa0.28□□□□□ -2.37
TCF4-239ENST00000568186 DNAH11Q96DT5 4516 aa0.28□□□□□ -2.37
TCF4-239ENST00000568186 HECTD4Q9Y4D8 3996 aa0.28□□□□□ -2.37
TCF4-239ENST00000568186 PKD1P98161 4303 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 MYO18BQ8IUG5 2567 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 USP9XQ93008 2570 aaPredicted RBP0.27□□□□□ -2.37
TCF4-239ENST00000568186 DNAH3Q8TD57 4116 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 H3BUX3 64 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 APELAP0DMC3 54 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 TGP01266 2768 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 TEX15Q9BXT5 2789 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 AKAP9Q99996 3911 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 VPS13DQ5THJ4 4388 aa0.27□□□□□ -2.37
TCF4-239ENST00000568186 HMCN2Q8NDA2 5059 aa0.26□□□□□ -2.37
TCF4-239ENST00000568186 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
TCF4-239ENST00000568186 CFAP54Q96N23 3096 aa0.26□□□□□ -2.37
TCF4-239ENST00000568186 HTN1P15515 57 aa0.26□□□□□ -2.37
TCF4-239ENST00000568186 DEFB1P60022 68 aa0.26□□□□□ -2.37
TCF4-239ENST00000568186 DEFB136Q30KP8 78 aa0.26□□□□□ -2.37
TCF4-239ENST00000568186 SONP18583 2426 aaKnown RBP0.26□□□□□ -2.37
TCF4-239ENST00000568186 LRP1BQ9NZR2 4599 aa0.26□□□□□ -2.37
TCF4-239ENST00000568186 HYDINQ4G0P3 5121 aa0.26□□□□□ -2.37
TCF4-239ENST00000568186 PKHD1L1Q86WI1 4243 aa0.25□□□□□ -2.37
TCF4-239ENST00000568186 CEP250Q9BV73 2442 aa0.25□□□□□ -2.37
TCF4-239ENST00000568186 ABCA13Q86UQ4 5058 aa0.25□□□□□ -2.37
TCF4-239ENST00000568186 KRTAP8-1Q8IUC2 63 aa0.25□□□□□ -2.37
TCF4-239ENST00000568186 LAMA5O15230 3695 aa0.25□□□□□ -2.37
TCF4-239ENST00000568186 CUBNO60494 3623 aa0.25□□□□□ -2.37
TCF4-239ENST00000568186 FASNP49327 2511 aaKnown RBP0.25□□□□□ -2.37
TCF4-239ENST00000568186 PKHD1P08F94 4074 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 NIPBLQ6KC79 2804 aaeCLIP0.24□□□□□ -2.37
TCF4-239ENST00000568186 DYNC2H1Q8NCM8 4307 aaKnown RBP0.24□□□□□ -2.37
TCF4-239ENST00000568186 DNAH12Q6ZR08 3092 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 ADGRG4Q8IZF6 3080 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 HSPG2P98160 4391 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 CFAP46Q8IYW2 2715 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 LAMA3Q16787 3333 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 PRUNE2Q8WUY3 3088 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 RYR3Q15413 4870 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 DNAH6Q9C0G6 4158 aa0.24□□□□□ -2.37
TCF4-239ENST00000568186 FLNAP21333 2647 aaKnown RBP0.23□□□□□ -2.37
TCF4-239ENST00000568186 DMXL2Q8TDJ6 3036 aa0.23□□□□□ -2.37
TCF4-239ENST00000568186 MT1AP04731 61 aa0.23□□□□□ -2.37
TCF4-239ENST00000568186 KRTAP6-2Q3LI66 62 aa0.23□□□□□ -2.37
TCF4-239ENST00000568186 DEFB124Q8NES8 71 aa0.23□□□□□ -2.37
TCF4-239ENST00000568186 SMG1Q96Q15 3661 aaKnown RBP0.23□□□□□ -2.37
TCF4-239ENST00000568186 SVEP1Q4LDE5 3571 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 ITPR2Q14571 2701 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 ATMQ13315 3056 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 FRYLO94915 3013 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 SPTAN1Q13813 2472 aaKnown RBP0.22□□□□□ -2.37
TCF4-239ENST00000568186 DOPEY1Q5JWR5 2465 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 STATHP02808 62 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 SMR3BP02814 79 aaPredicted RBP0.22□□□□□ -2.37
TCF4-239ENST00000568186 SPRR2AP35326 72 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 TRRAPQ9Y4A5 3859 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 HERC1Q15751 4861 aa0.22□□□□□ -2.37
TCF4-239ENST00000568186 CSMD1Q96PZ7 3565 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 DNAH2Q9P225 4427 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 C5orf42Q9H799 3197 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 HTTP42858 3142 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 DNAH10Q8IVF4 4471 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 DEFB133Q30KQ1 61 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 KRTAP19-5Q3LI72 72 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 ANK3Q12955 4377 aaKnown RBP0.21□□□□□ -2.38
TCF4-239ENST00000568186 NBEAL1Q6ZS30 2694 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 RANBP2P49792 3224 aaKnown RBP0.21□□□□□ -2.38
TCF4-239ENST00000568186 MGAM2Q2M2H8 2515 aa0.21□□□□□ -2.38
TCF4-239ENST00000568186 SPTBN5Q9NRC6 3674 aaKnown RBP0.2□□□□□ -2.38
TCF4-239ENST00000568186 PLECQ15149 4684 aaKnown RBP0.2□□□□□ -2.38
TCF4-239ENST00000568186 SPRR2EP22531 72 aa0.2□□□□□ -2.38
TCF4-239ENST00000568186 SPRR2FQ96RM1 72 aa0.2□□□□□ -2.38
TCF4-239ENST00000568186 EPPK1P58107 5090 aaKnown RBP0.2□□□□□ -2.38
TCF4-239ENST00000568186 RELNP78509 3460 aa0.2□□□□□ -2.38
TCF4-239ENST00000568186 TLN1Q9Y490 2541 aaKnown RBP0.2□□□□□ -2.38
TCF4-239ENST00000568186 DNAH8Q96JB1 4490 aa0.2□□□□□ -2.38
TCF4-239ENST00000568186 STAB2Q8WWQ8 2551 aa0.19□□□□□ -2.38
TCF4-239ENST00000568186 DYNC1H1Q14204 4646 aaKnown RBP0.19□□□□□ -2.38
TCF4-239ENST00000568186 CENPEQ02224 2701 aa0.19□□□□□ -2.38
TCF4-239ENST00000568186 DNAH5Q8TE73 4624 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms