RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 LCE2BO14633 110 aa8.04□□□□□ -1.12
COMMD4-220ENST00000567720 TRAV7A0A075B6U4 112 aa8.02□□□□□ -1.13
COMMD4-220ENST00000567720 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
COMMD4-220ENST00000567720 A8MUN3 132 aa8.01□□□□□ -1.13
COMMD4-220ENST00000567720 SMIM20Q8N5G0 67 aa8.01□□□□□ -1.13
COMMD4-220ENST00000567720 SSPOA2VEC9 5147 aa8□□□□□ -1.13
COMMD4-220ENST00000567720 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
COMMD4-220ENST00000567720 NDUFC1O43677 76 aa7.89□□□□□ -1.15
COMMD4-220ENST00000567720 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
COMMD4-220ENST00000567720 SNURFQ9Y675 71 aa7.86□□□□□ -1.15
COMMD4-220ENST00000567720 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
COMMD4-220ENST00000567720 C20orf197Q8N268 126 aa7.82□□□□□ -1.16
COMMD4-220ENST00000567720 H0YAA0 97 aa7.79□□□□□ -1.16
COMMD4-220ENST00000567720 SPRR2GQ9BYE4 73 aa7.76□□□□□ -1.17
COMMD4-220ENST00000567720 FCGBPQ9Y6R7 5405 aaPredicted RBP7.74□□□□□ -1.17
COMMD4-220ENST00000567720 ACYP2P14621 99 aa7.71□□□□□ -1.18
COMMD4-220ENST00000567720 ADM2Q7Z4H4 148 aa7.71□□□□□ -1.18
COMMD4-220ENST00000567720 SPANXA2-OT1Q8N9U9 137 aa7.7□□□□□ -1.18
COMMD4-220ENST00000567720 COX7CP15954 63 aa7.69□□□□□ -1.18
COMMD4-220ENST00000567720 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
COMMD4-220ENST00000567720 MT1BP07438 61 aa7.67□□□□□ -1.18
COMMD4-220ENST00000567720 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
COMMD4-220ENST00000567720 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
COMMD4-220ENST00000567720 Q5VV11 94 aa7.62□□□□□ -1.19
COMMD4-220ENST00000567720 P0C880 135 aa7.61□□□□□ -1.19
COMMD4-220ENST00000567720 CYSTM1Q9H1C7 97 aa7.61□□□□□ -1.19
COMMD4-220ENST00000567720 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.19
COMMD4-220ENST00000567720 CHKB-CPT1BH3BT56 60 aa7.58□□□□□ -1.2
COMMD4-220ENST00000567720 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
COMMD4-220ENST00000567720 H7BZZ5 65 aa7.55□□□□□ -1.2
COMMD4-220ENST00000567720 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
COMMD4-220ENST00000567720 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.53□□□□□ -1.2
COMMD4-220ENST00000567720 COA5Q86WW8 74 aa7.49□□□□□ -1.21
COMMD4-220ENST00000567720 R4GN34 69 aa7.48□□□□□ -1.21
COMMD4-220ENST00000567720 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
COMMD4-220ENST00000567720 M0QZ58 72 aa7.45□□□□□ -1.22
COMMD4-220ENST00000567720 CCDC179H3BU77 68 aa7.44□□□□□ -1.22
COMMD4-220ENST00000567720 A6NN06 94 aa7.41□□□□□ -1.22
COMMD4-220ENST00000567720 KRTAP10-5P60370 271 aa7.4□□□□□ -1.22
COMMD4-220ENST00000567720 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
COMMD4-220ENST00000567720 LINC01554Q52M75 96 aa7.32□□□□□ -1.24
COMMD4-220ENST00000567720 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
COMMD4-220ENST00000567720 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
COMMD4-220ENST00000567720 MT1XP80297 61 aa7.25□□□□□ -1.25
COMMD4-220ENST00000567720 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
COMMD4-220ENST00000567720 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
COMMD4-220ENST00000567720 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
COMMD4-220ENST00000567720 SEC61GP60059 68 aa7.17□□□□□ -1.26
COMMD4-220ENST00000567720 TMEM258P61165 79 aa7.16□□□□□ -1.26
COMMD4-220ENST00000567720 SERP1Q9Y6X1 66 aa7.15□□□□□ -1.26
COMMD4-220ENST00000567720 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
COMMD4-220ENST00000567720 A0A1B0GU33 70 aa7.06□□□□□ -1.28
COMMD4-220ENST00000567720 A0A1B0GU69 56 aa7.06□□□□□ -1.28
COMMD4-220ENST00000567720 KMT2DO14686 5537 aa7.06□□□□□ -1.28
COMMD4-220ENST00000567720 SPATA8Q6RVD6 105 aa7.05□□□□□ -1.28
COMMD4-220ENST00000567720 A0A0D9SG42 100 aa7□□□□□ -1.29
COMMD4-220ENST00000567720 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
COMMD4-220ENST00000567720 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
COMMD4-220ENST00000567720 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
COMMD4-220ENST00000567720 KRTAP5-9P26371 169 aa6.93□□□□□ -1.3
COMMD4-220ENST00000567720 KRTAP10-7P60409 375 aaPredicted RBP6.93□□□□□ -1.3
COMMD4-220ENST00000567720 CAMK2N1Q7Z7J9 78 aa6.91□□□□□ -1.3
COMMD4-220ENST00000567720 PRR15LQ9BU68 103 aa6.9□□□□□ -1.3
COMMD4-220ENST00000567720 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
COMMD4-220ENST00000567720 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
COMMD4-220ENST00000567720 A8MU10 97 aa6.86□□□□□ -1.31
COMMD4-220ENST00000567720 SPINT4Q6UDR6 99 aa6.86□□□□□ -1.31
COMMD4-220ENST00000567720 NEBP20929 6669 aa6.84□□□□□ -1.31
COMMD4-220ENST00000567720 SMIM26A0A096LP01 95 aa6.84□□□□□ -1.31
COMMD4-220ENST00000567720 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
COMMD4-220ENST00000567720 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
COMMD4-220ENST00000567720 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
COMMD4-220ENST00000567720 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
COMMD4-220ENST00000567720 SPRR2FQ96RM1 72 aa6.77□□□□□ -1.33
COMMD4-220ENST00000567720 PCP4P48539 62 aa6.76□□□□□ -1.33
COMMD4-220ENST00000567720 UQCR11O14957 56 aa6.69□□□□□ -1.34
COMMD4-220ENST00000567720 Q1T7F1 81 aa6.66□□□□□ -1.34
COMMD4-220ENST00000567720 V9GYY9 64 aa6.65□□□□□ -1.34
COMMD4-220ENST00000567720 PSPHP1O15172 72 aa6.63□□□□□ -1.35
COMMD4-220ENST00000567720 SPRR2EP22531 72 aa6.61□□□□□ -1.35
COMMD4-220ENST00000567720 SPRR2BP35325 72 aa6.61□□□□□ -1.35
COMMD4-220ENST00000567720 SPRR2AP35326 72 aa6.61□□□□□ -1.35
COMMD4-220ENST00000567720 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
COMMD4-220ENST00000567720 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
COMMD4-220ENST00000567720 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
COMMD4-220ENST00000567720 RPS28P62857 69 aaKnown RBP6.52□□□□□ -1.37
COMMD4-220ENST00000567720 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
COMMD4-220ENST00000567720 KRTAP20-1Q3LI63 56 aa6.45□□□□□ -1.38
COMMD4-220ENST00000567720 TNP1P09430 55 aa6.43□□□□□ -1.38
COMMD4-220ENST00000567720 A6NED7 52 aa6.41□□□□□ -1.38
COMMD4-220ENST00000567720 MT1EP04732 61 aa6.41□□□□□ -1.38
COMMD4-220ENST00000567720 SPRR2DP22532 72 aa6.38□□□□□ -1.39
COMMD4-220ENST00000567720 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
COMMD4-220ENST00000567720 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
COMMD4-220ENST00000567720 K7ERS5 55 aa6.35□□□□□ -1.39
COMMD4-220ENST00000567720 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
COMMD4-220ENST00000567720 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
COMMD4-220ENST00000567720 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
COMMD4-220ENST00000567720 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
COMMD4-220ENST00000567720 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms