RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ZANQ9Y493 2812 aa3.22□□□□□ -1.89
CNOT1-211ENST00000567188 HIVEP1P15822 2718 aa3.21□□□□□ -1.89
CNOT1-211ENST00000567188 HSPG2P98160 4391 aa3.19□□□□□ -1.9
CNOT1-211ENST00000567188 NF1P21359 2839 aa3.18□□□□□ -1.9
CNOT1-211ENST00000567188 KRTAP1-4P0C5Y4 121 aa3.18□□□□□ -1.9
CNOT1-211ENST00000567188 DNHD1Q96M86 4753 aa3.18□□□□□ -1.9
CNOT1-211ENST00000567188 DYNC1H1Q14204 4646 aaKnown RBP3.17□□□□□ -1.9
CNOT1-211ENST00000567188 MXRA5Q9NR99 2828 aa3.17□□□□□ -1.9
CNOT1-211ENST00000567188 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
CNOT1-211ENST00000567188 TNXBP22105 4242 aa3.15□□□□□ -1.9
CNOT1-211ENST00000567188 KRTAP13-3Q3SY46 172 aa3.14□□□□□ -1.91
CNOT1-211ENST00000567188 LRP1BQ9NZR2 4599 aa3.14□□□□□ -1.91
CNOT1-211ENST00000567188 APOBP04114 4563 aaKnown RBP3.14□□□□□ -1.91
CNOT1-211ENST00000567188 TPRXLQ17RH7 258 aa3.11□□□□□ -1.91
CNOT1-211ENST00000567188 TENM1Q9UKZ4 2725 aa3.1□□□□□ -1.91
CNOT1-211ENST00000567188 TGP01266 2768 aa3.08□□□□□ -1.92
CNOT1-211ENST00000567188 FAT3Q8TDW7 4589 aa3.08□□□□□ -1.92
CNOT1-211ENST00000567188 XP32Q5T750 250 aa3.08□□□□□ -1.92
CNOT1-211ENST00000567188 KRTAP17-1Q9BYP8 105 aa3.07□□□□□ -1.92
CNOT1-211ENST00000567188 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
CNOT1-211ENST00000567188 LPAP08519 4548 aa3.05□□□□□ -1.92
CNOT1-211ENST00000567188 TENM3Q9P273 2699 aa3.02□□□□□ -1.93
CNOT1-211ENST00000567188 KRTAP13-4Q3LI77 160 aa3.02□□□□□ -1.93
CNOT1-211ENST00000567188 VWFP04275 2813 aa3□□□□□ -1.93
CNOT1-211ENST00000567188 MUC17Q685J3 4493 aa3□□□□□ -1.93
CNOT1-211ENST00000567188 KRTAP10-4P60372 401 aaPredicted RBP2.98□□□□□ -1.93
CNOT1-211ENST00000567188 MT1HL1P0DM35 61 aa2.97□□□□□ -1.93
CNOT1-211ENST00000567188 FAT1Q14517 4588 aa2.96□□□□□ -1.94
CNOT1-211ENST00000567188 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
CNOT1-211ENST00000567188 TENM2Q9NT68 2774 aa2.95□□□□□ -1.94
CNOT1-211ENST00000567188 KRTAP12-1P59990 96 aa2.94□□□□□ -1.94
CNOT1-211ENST00000567188 KRTAP10-6P60371 365 aaPredicted RBP2.94□□□□□ -1.94
CNOT1-211ENST00000567188 MYCBP2O75592 4640 aa2.91□□□□□ -1.94
CNOT1-211ENST00000567188 RYR2Q92736 4967 aa2.91□□□□□ -1.94
CNOT1-211ENST00000567188 PKD1L1Q8TDX9 2849 aa2.88□□□□□ -1.95
CNOT1-211ENST00000567188 RYR3Q15413 4870 aa2.88□□□□□ -1.95
CNOT1-211ENST00000567188 COL7A1Q02388 2944 aa2.87□□□□□ -1.95
CNOT1-211ENST00000567188 MEGF8Q7Z7M0 2845 aa2.85□□□□□ -1.95
CNOT1-211ENST00000567188 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
CNOT1-211ENST00000567188 FBN3Q75N90 2809 aa2.83□□□□□ -1.96
CNOT1-211ENST00000567188 KRTAP3-1Q9BYR8 98 aa2.81□□□□□ -1.96
CNOT1-211ENST00000567188 KRTAP4-1Q9BYQ7 146 aa2.8□□□□□ -1.96
CNOT1-211ENST00000567188 KMT2CQ8NEZ4 4911 aaKnown RBP2.8□□□□□ -1.96
CNOT1-211ENST00000567188 LRP1Q07954 4544 aaKnown RBP2.79□□□□□ -1.96
CNOT1-211ENST00000567188 SRRM2Q9UQ35 2752 aaKnown RBP2.74□□□□□ -1.97
CNOT1-211ENST00000567188 EPPK1P58107 5090 aaKnown RBP2.74□□□□□ -1.97
CNOT1-211ENST00000567188 KRTAP3-2Q9BYR7 98 aa2.73□□□□□ -1.97
CNOT1-211ENST00000567188 KRTAP10-7P60409 375 aaPredicted RBP2.69□□□□□ -1.98
CNOT1-211ENST00000567188 MT1HP80294 61 aa2.68□□□□□ -1.98
CNOT1-211ENST00000567188 LORP23490 312 aaPredicted RBP2.64□□□□□ -1.99
CNOT1-211ENST00000567188 BIRC6Q9NR09 4857 aa2.64□□□□□ -1.99
CNOT1-211ENST00000567188 KRTAP3-3Q9BYR6 98 aa2.62□□□□□ -1.99
CNOT1-211ENST00000567188 KRTAP10-12P60413 245 aa2.62□□□□□ -1.99
CNOT1-211ENST00000567188 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
CNOT1-211ENST00000567188 RYR1P21817 5038 aa2.6□□□□□ -1.99
CNOT1-211ENST00000567188 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
CNOT1-211ENST00000567188 KRTAP10-5P60370 271 aa2.55□□□□□ -2
CNOT1-211ENST00000567188 PCLOQ9Y6V0 5065 aa2.55□□□□□ -2
CNOT1-211ENST00000567188 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
CNOT1-211ENST00000567188 KRTAP19-4Q3LI73 84 aa2.51□□□□□ -2.01
CNOT1-211ENST00000567188 MT1FP04733 61 aa2.5□□□□□ -2.01
CNOT1-211ENST00000567188 MT2AP02795 61 aa2.48□□□□□ -2.01
CNOT1-211ENST00000567188 HERC2O95714 4834 aa2.48□□□□□ -2.01
CNOT1-211ENST00000567188 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
CNOT1-211ENST00000567188 ABCA13Q86UQ4 5058 aa2.45□□□□□ -2.02
CNOT1-211ENST00000567188 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
CNOT1-211ENST00000567188 LRP2P98164 4655 aa2.42□□□□□ -2.02
CNOT1-211ENST00000567188 LCE2CQ5TA81 110 aa2.42□□□□□ -2.02
CNOT1-211ENST00000567188 HERC1Q15751 4861 aa2.42□□□□□ -2.02
CNOT1-211ENST00000567188 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
CNOT1-211ENST00000567188 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
CNOT1-211ENST00000567188 SPRR2EP22531 72 aa2.36□□□□□ -2.03
CNOT1-211ENST00000567188 SPRR2BP35325 72 aa2.36□□□□□ -2.03
CNOT1-211ENST00000567188 SPRR2AP35326 72 aa2.36□□□□□ -2.03
CNOT1-211ENST00000567188 KRTAP9-8Q9BYQ0 159 aa2.36□□□□□ -2.03
CNOT1-211ENST00000567188 KRTAP9-2Q9BYQ4 174 aa2.34□□□□□ -2.03
CNOT1-211ENST00000567188 KRTAP19-1Q8IUB9 90 aa2.34□□□□□ -2.03
CNOT1-211ENST00000567188 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
CNOT1-211ENST00000567188 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
CNOT1-211ENST00000567188 SPRR2DP22532 72 aa2.32□□□□□ -2.04
CNOT1-211ENST00000567188 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
CNOT1-211ENST00000567188 KRTAP9-3Q9BYQ3 159 aa2.28□□□□□ -2.04
CNOT1-211ENST00000567188 LCE2BO14633 110 aa2.26□□□□□ -2.05
CNOT1-211ENST00000567188 KRTAP19-5Q3LI72 72 aa2.25□□□□□ -2.05
CNOT1-211ENST00000567188 LCE3CQ5T5A8 94 aa2.24□□□□□ -2.05
CNOT1-211ENST00000567188 KRTAP4-8A0A0G2JLE6 195 aa2.24□□□□□ -2.05
CNOT1-211ENST00000567188 KRTAP4-8Q9BYQ9 185 aa2.24□□□□□ -2.05
CNOT1-211ENST00000567188 MT1BP07438 61 aa2.23□□□□□ -2.05
CNOT1-211ENST00000567188 MT3P25713 68 aa2.22□□□□□ -2.05
CNOT1-211ENST00000567188 MT1XP80297 61 aa2.21□□□□□ -2.06
CNOT1-211ENST00000567188 KRTAP9-6A0A140TA67 174 aa2.2□□□□□ -2.06
CNOT1-211ENST00000567188 LCE2AQ5TA79 106 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-211ENST00000567188 KRTAP19-8Q3LI54 63 aa2.19□□□□□ -2.06
CNOT1-211ENST00000567188 HMCN2Q8NDA2 5059 aa2.18□□□□□ -2.06
CNOT1-211ENST00000567188 MUC2Q02817 5179 aa2.17□□□□□ -2.06
CNOT1-211ENST00000567188 UBR4Q5T4S7 5183 aa2.17□□□□□ -2.06
CNOT1-211ENST00000567188 LCE2DQ5TA82 110 aaPredicted RBP2.16□□□□□ -2.06
CNOT1-211ENST00000567188 FAT4Q6V0I7 4981 aa2.14□□□□□ -2.07
CNOT1-211ENST00000567188 KRTAP4-7Q9BYR0 210 aa2.08□□□□□ -2.08
CNOT1-211ENST00000567188 MT1GP13640 62 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms