RNA–Protein interactions for RNA: ENST00000565421.1

AC007342.3-202, humanhuman

TSL 1 (best)

Gene AC007342.3, Length 3,792 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007342.3-202ENST00000565421 SPRR1AP35321 89 aa3.74□□□□□ -1.81
AC007342.3-202ENST00000565421 FAT1Q14517 4588 aa3.74□□□□□ -1.81
AC007342.3-202ENST00000565421 A0A096LNI7 61 aa3.74□□□□□ -1.81
AC007342.3-202ENST00000565421 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
AC007342.3-202ENST00000565421 LRP1BQ9NZR2 4599 aa3.72□□□□□ -1.81
AC007342.3-202ENST00000565421 SPACA4Q8TDM5 124 aa3.7□□□□□ -1.82
AC007342.3-202ENST00000565421 IGKV2D-30A0A075B6S6 120 aa3.69□□□□□ -1.82
AC007342.3-202ENST00000565421 IGKV2-30P06310 120 aa3.69□□□□□ -1.82
AC007342.3-202ENST00000565421 TENM2Q9NT68 2774 aa3.67□□□□□ -1.82
AC007342.3-202ENST00000565421 LCE2BO14633 110 aa3.66□□□□□ -1.82
AC007342.3-202ENST00000565421 MYCBP2O75592 4640 aa3.65□□□□□ -1.82
AC007342.3-202ENST00000565421 INE1O15225 51 aa3.64□□□□□ -1.83
AC007342.3-202ENST00000565421 SPINK6Q6UWN8 80 aa3.64□□□□□ -1.83
AC007342.3-202ENST00000565421 KRTAP13-1Q8IUC0 172 aa3.64□□□□□ -1.83
AC007342.3-202ENST00000565421 LCE2AQ5TA79 106 aaPredicted RBP3.63□□□□□ -1.83
AC007342.3-202ENST00000565421 SPRR1BP22528 89 aa3.62□□□□□ -1.83
AC007342.3-202ENST00000565421 KRTAP10-2P60368 255 aa3.62□□□□□ -1.83
AC007342.3-202ENST00000565421 FLGP20930 4061 aaPredicted RBP3.62□□□□□ -1.83
AC007342.3-202ENST00000565421 RYR1P21817 5038 aa3.61□□□□□ -1.83
AC007342.3-202ENST00000565421 A0A0D9SG42 100 aa3.6□□□□□ -1.83
AC007342.3-202ENST00000565421 EPPK1P58107 5090 aaKnown RBP3.59□□□□□ -1.83
AC007342.3-202ENST00000565421 MUC17Q685J3 4493 aa3.59□□□□□ -1.84
AC007342.3-202ENST00000565421 KRTAP10-1P60331 282 aa3.58□□□□□ -1.84
AC007342.3-202ENST00000565421 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
AC007342.3-202ENST00000565421 TGP01266 2768 aa3.57□□□□□ -1.84
AC007342.3-202ENST00000565421 A0A1B0GVY2 172 aa3.57□□□□□ -1.84
AC007342.3-202ENST00000565421 BIRC6Q9NR09 4857 aa3.56□□□□□ -1.84
AC007342.3-202ENST00000565421 DMBT1Q9UGM3 2413 aaPredicted RBP3.56□□□□□ -1.84
AC007342.3-202ENST00000565421 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
AC007342.3-202ENST00000565421 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
AC007342.3-202ENST00000565421 LCE2CQ5TA81 110 aa3.53□□□□□ -1.84
AC007342.3-202ENST00000565421 S4R3F8 94 aa3.49□□□□□ -1.85
AC007342.3-202ENST00000565421 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
AC007342.3-202ENST00000565421 XP32Q5T750 250 aa3.47□□□□□ -1.85
AC007342.3-202ENST00000565421 KRTAP10-4P60372 401 aaPredicted RBP3.47□□□□□ -1.85
AC007342.3-202ENST00000565421 SRRM2Q9UQ35 2752 aaKnown RBP3.45□□□□□ -1.86
AC007342.3-202ENST00000565421 KRTAP13-2Q52LG2 175 aa3.45□□□□□ -1.86
AC007342.3-202ENST00000565421 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
AC007342.3-202ENST00000565421 HERC2O95714 4834 aa3.44□□□□□ -1.86
AC007342.3-202ENST00000565421 LRP1Q07954 4544 aaKnown RBP3.41□□□□□ -1.86
AC007342.3-202ENST00000565421 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
AC007342.3-202ENST00000565421 SMR3BP02814 79 aaPredicted RBP3.4□□□□□ -1.86
AC007342.3-202ENST00000565421 RPS29P62273 56 aaKnown RBP3.4□□□□□ -1.87
AC007342.3-202ENST00000565421 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
AC007342.3-202ENST00000565421 Q5VSD8 79 aa3.34□□□□□ -1.87
AC007342.3-202ENST00000565421 KRTAP10-8P60410 259 aa3.34□□□□□ -1.88
AC007342.3-202ENST00000565421 LPAP08519 4548 aa3.34□□□□□ -1.88
AC007342.3-202ENST00000565421 KRTAP17-1Q9BYP8 105 aa3.33□□□□□ -1.88
AC007342.3-202ENST00000565421 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
AC007342.3-202ENST00000565421 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
AC007342.3-202ENST00000565421 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
AC007342.3-202ENST00000565421 LORP23490 312 aaPredicted RBP3.28□□□□□ -1.88
AC007342.3-202ENST00000565421 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
AC007342.3-202ENST00000565421 M0QZ58 72 aa3.24□□□□□ -1.89
AC007342.3-202ENST00000565421 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
AC007342.3-202ENST00000565421 LRP2P98164 4655 aa3.24□□□□□ -1.89
AC007342.3-202ENST00000565421 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
AC007342.3-202ENST00000565421 KRTAP3-1Q9BYR8 98 aa3.23□□□□□ -1.89
AC007342.3-202ENST00000565421 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
AC007342.3-202ENST00000565421 KRTAP4-8A0A0G2JLE6 195 aa3.2□□□□□ -1.9
AC007342.3-202ENST00000565421 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
AC007342.3-202ENST00000565421 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
AC007342.3-202ENST00000565421 KRTAP10-6P60371 365 aaPredicted RBP3.2□□□□□ -1.9
AC007342.3-202ENST00000565421 HMCN2Q8NDA2 5059 aa3.19□□□□□ -1.9
AC007342.3-202ENST00000565421 C9orf92A6NGG3 77 aa3.17□□□□□ -1.9
AC007342.3-202ENST00000565421 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
AC007342.3-202ENST00000565421 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
AC007342.3-202ENST00000565421 LCE3BQ5TA77 95 aa3.15□□□□□ -1.9
AC007342.3-202ENST00000565421 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
AC007342.3-202ENST00000565421 HERC1Q15751 4861 aa3.1□□□□□ -1.91
AC007342.3-202ENST00000565421 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.92
AC007342.3-202ENST00000565421 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
AC007342.3-202ENST00000565421 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
AC007342.3-202ENST00000565421 KRTAP19-1Q8IUB9 90 aa3□□□□□ -1.93
AC007342.3-202ENST00000565421 TNP1P09430 55 aa2.99□□□□□ -1.93
AC007342.3-202ENST00000565421 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
AC007342.3-202ENST00000565421 KRTAP4-1Q9BYQ7 146 aa2.94□□□□□ -1.94
AC007342.3-202ENST00000565421 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
AC007342.3-202ENST00000565421 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
AC007342.3-202ENST00000565421 UBR4Q5T4S7 5183 aa2.85□□□□□ -1.95
AC007342.3-202ENST00000565421 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.96
AC007342.3-202ENST00000565421 MUC2Q02817 5179 aa2.83□□□□□ -1.96
AC007342.3-202ENST00000565421 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
AC007342.3-202ENST00000565421 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
AC007342.3-202ENST00000565421 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
AC007342.3-202ENST00000565421 RNF213Q63HN8 5207 aa2.74□□□□□ -1.97
AC007342.3-202ENST00000565421 MT1HP80294 61 aa2.73□□□□□ -1.97
AC007342.3-202ENST00000565421 M0R2T5 61 aa2.64□□□□□ -1.99
AC007342.3-202ENST00000565421 MT2AP02795 61 aa2.63□□□□□ -1.99
AC007342.3-202ENST00000565421 SPRR2GQ9BYE4 73 aa2.63□□□□□ -1.99
AC007342.3-202ENST00000565421 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
AC007342.3-202ENST00000565421 MT1FP04733 61 aa2.61□□□□□ -1.99
AC007342.3-202ENST00000565421 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
AC007342.3-202ENST00000565421 KRTAP19-4Q3LI73 84 aa2.59□□□□□ -1.99
AC007342.3-202ENST00000565421 USH2AO75445 5202 aa2.59□□□□□ -2
AC007342.3-202ENST00000565421 SSPOA2VEC9 5147 aa2.57□□□□□ -2
AC007342.3-202ENST00000565421 KRTAP9-3Q9BYQ3 159 aa2.56□□□□□ -2
AC007342.3-202ENST00000565421 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
AC007342.3-202ENST00000565421 MT1BP07438 61 aa2.5□□□□□ -2.01
AC007342.3-202ENST00000565421 MT3P25713 68 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms