RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 HUWE1Q7Z6Z7 4374 aaKnown RBP2.3□□□□□ -2.04
SMG1-211ENST00000565324 KMT2AQ03164 3969 aa2.29□□□□□ -2.04
SMG1-211ENST00000565324 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
SMG1-211ENST00000565324 FBN3Q75N90 2809 aa2.26□□□□□ -2.05
SMG1-211ENST00000565324 PRKDCP78527 4128 aaKnown RBP2.24□□□□□ -2.05
SMG1-211ENST00000565324 DNAH9Q9NYC9 4486 aa2.24□□□□□ -2.05
SMG1-211ENST00000565324 KRTAP3-2Q9BYR7 98 aa2.24□□□□□ -2.05
SMG1-211ENST00000565324 DNHD1Q96M86 4753 aa2.23□□□□□ -2.05
SMG1-211ENST00000565324 KRTAP3-3Q9BYR6 98 aa2.22□□□□□ -2.05
SMG1-211ENST00000565324 VPS13BQ7Z7G8 4022 aa2.19□□□□□ -2.06
SMG1-211ENST00000565324 CRCT1Q9UGL9 99 aa2.19□□□□□ -2.06
SMG1-211ENST00000565324 DNAH6Q9C0G6 4158 aa2.18□□□□□ -2.06
SMG1-211ENST00000565324 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
SMG1-211ENST00000565324 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
SMG1-211ENST00000565324 FRAS1Q86XX4 4008 aa2.16□□□□□ -2.06
SMG1-211ENST00000565324 DNAH1Q9P2D7 4330 aa2.16□□□□□ -2.06
SMG1-211ENST00000565324 KRTAP10-5P60370 271 aa2.15□□□□□ -2.07
SMG1-211ENST00000565324 VPS13DQ5THJ4 4388 aa2.15□□□□□ -2.07
SMG1-211ENST00000565324 PKHD1P08F94 4074 aa2.14□□□□□ -2.07
SMG1-211ENST00000565324 STARD9Q9P2P6 4700 aa2.13□□□□□ -2.07
SMG1-211ENST00000565324 PLECQ15149 4684 aaKnown RBP2.12□□□□□ -2.07
SMG1-211ENST00000565324 KRTAP19-4Q3LI73 84 aa2.1□□□□□ -2.07
SMG1-211ENST00000565324 MT1HL1P0DM35 61 aa2.1□□□□□ -2.07
SMG1-211ENST00000565324 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.07
SMG1-211ENST00000565324 SACSQ9NZJ4 4579 aa2.09□□□□□ -2.07
SMG1-211ENST00000565324 KRTAP8-1Q8IUC2 63 aa2.07□□□□□ -2.08
SMG1-211ENST00000565324 DNAH2Q9P225 4427 aa2.07□□□□□ -2.08
SMG1-211ENST00000565324 DYNC2H1Q8NCM8 4307 aaKnown RBP2.06□□□□□ -2.08
SMG1-211ENST00000565324 FAT2Q9NYQ8 4349 aa2.04□□□□□ -2.08
SMG1-211ENST00000565324 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
SMG1-211ENST00000565324 DNAH11Q96DT5 4516 aa2.03□□□□□ -2.09
SMG1-211ENST00000565324 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
SMG1-211ENST00000565324 KRTAP10-4P60372 401 aaPredicted RBP2□□□□□ -2.09
SMG1-211ENST00000565324 KMT2CQ8NEZ4 4911 aaKnown RBP2□□□□□ -2.09
SMG1-211ENST00000565324 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
SMG1-211ENST00000565324 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
SMG1-211ENST00000565324 SPRR2GQ9BYE4 73 aa1.98□□□□□ -2.09
SMG1-211ENST00000565324 HYDINQ4G0P3 5121 aa1.98□□□□□ -2.09
SMG1-211ENST00000565324 HSPG2P98160 4391 aa1.97□□□□□ -2.09
SMG1-211ENST00000565324 DNAH5Q8TE73 4624 aa1.97□□□□□ -2.09
SMG1-211ENST00000565324 DNAH8Q96JB1 4490 aa1.97□□□□□ -2.09
SMG1-211ENST00000565324 PKD1P98161 4303 aa1.97□□□□□ -2.09
SMG1-211ENST00000565324 LORP23490 312 aaPredicted RBP1.96□□□□□ -2.1
SMG1-211ENST00000565324 KRTAP4-5Q9BYR2 181 aa1.95□□□□□ -2.1
SMG1-211ENST00000565324 APOBP04114 4563 aaKnown RBP1.92□□□□□ -2.1
SMG1-211ENST00000565324 FAT1Q14517 4588 aa1.9□□□□□ -2.1
SMG1-211ENST00000565324 RYR3Q15413 4870 aa1.9□□□□□ -2.11
SMG1-211ENST00000565324 DYNC1H1Q14204 4646 aaKnown RBP1.9□□□□□ -2.11
SMG1-211ENST00000565324 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
SMG1-211ENST00000565324 PKHD1L1Q86WI1 4243 aa1.88□□□□□ -2.11
SMG1-211ENST00000565324 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
SMG1-211ENST00000565324 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
SMG1-211ENST00000565324 TNXBP22105 4242 aa1.85□□□□□ -2.11
SMG1-211ENST00000565324 RYR2Q92736 4967 aa1.84□□□□□ -2.11
SMG1-211ENST00000565324 MT2AP02795 61 aa1.84□□□□□ -2.11
SMG1-211ENST00000565324 MT1HP80294 61 aa1.84□□□□□ -2.11
SMG1-211ENST00000565324 FAT3Q8TDW7 4589 aa1.84□□□□□ -2.12
SMG1-211ENST00000565324 MT3P25713 68 aa1.82□□□□□ -2.12
SMG1-211ENST00000565324 LPAP08519 4548 aa1.82□□□□□ -2.12
SMG1-211ENST00000565324 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
SMG1-211ENST00000565324 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
SMG1-211ENST00000565324 EPPK1P58107 5090 aaKnown RBP1.8□□□□□ -2.12
SMG1-211ENST00000565324 LCE3BQ5TA77 95 aa1.8□□□□□ -2.12
SMG1-211ENST00000565324 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
SMG1-211ENST00000565324 KRTAP17-1Q9BYP8 105 aa1.79□□□□□ -2.12
SMG1-211ENST00000565324 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
SMG1-211ENST00000565324 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
SMG1-211ENST00000565324 MT1FP04733 61 aa1.76□□□□□ -2.13
SMG1-211ENST00000565324 KRTAP19-8Q3LI54 63 aa1.75□□□□□ -2.13
SMG1-211ENST00000565324 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
SMG1-211ENST00000565324 HERC2O95714 4834 aa1.75□□□□□ -2.13
SMG1-211ENST00000565324 LCE2BO14633 110 aa1.74□□□□□ -2.13
SMG1-211ENST00000565324 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
SMG1-211ENST00000565324 RYR1P21817 5038 aa1.73□□□□□ -2.13
SMG1-211ENST00000565324 SPRR2EP22531 72 aa1.73□□□□□ -2.13
SMG1-211ENST00000565324 SPRR2BP35325 72 aa1.73□□□□□ -2.13
SMG1-211ENST00000565324 SPRR2AP35326 72 aa1.73□□□□□ -2.13
SMG1-211ENST00000565324 MT1GP13640 62 aa1.72□□□□□ -2.13
SMG1-211ENST00000565324 KRTAP19-1Q8IUB9 90 aa1.7□□□□□ -2.14
SMG1-211ENST00000565324 SPRR2DP22532 72 aa1.69□□□□□ -2.14
SMG1-211ENST00000565324 MT1XP80297 61 aa1.68□□□□□ -2.14
SMG1-211ENST00000565324 KIAA1109Q2LD37 5005 aa1.68□□□□□ -2.14
SMG1-211ENST00000565324 LRP2P98164 4655 aa1.68□□□□□ -2.14
SMG1-211ENST00000565324 MT1LQ93083 61 aa1.67□□□□□ -2.14
SMG1-211ENST00000565324 MUC17Q685J3 4493 aa1.65□□□□□ -2.15
SMG1-211ENST00000565324 HERC1Q15751 4861 aa1.64□□□□□ -2.15
SMG1-211ENST00000565324 PRM1P04553 51 aa1.61□□□□□ -2.15
SMG1-211ENST00000565324 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
SMG1-211ENST00000565324 LCE2CQ5TA81 110 aa1.6□□□□□ -2.15
SMG1-211ENST00000565324 MT1BP07438 61 aa1.59□□□□□ -2.15
SMG1-211ENST00000565324 ABCA13Q86UQ4 5058 aa1.59□□□□□ -2.16
SMG1-211ENST00000565324 MUC2Q02817 5179 aa1.58□□□□□ -2.16
SMG1-211ENST00000565324 MT1EP04732 61 aa1.57□□□□□ -2.16
SMG1-211ENST00000565324 PCLOQ9Y6V0 5065 aa1.57□□□□□ -2.16
SMG1-211ENST00000565324 KRTAP9-8Q9BYQ0 159 aa1.56□□□□□ -2.16
SMG1-211ENST00000565324 LCE2DQ5TA82 110 aaPredicted RBP1.55□□□□□ -2.16
SMG1-211ENST00000565324 KRTAP9-2Q9BYQ4 174 aa1.55□□□□□ -2.16
SMG1-211ENST00000565324 KRTAP4-8A0A0G2JLE6 195 aa1.54□□□□□ -2.16
SMG1-211ENST00000565324 KRTAP4-8Q9BYQ9 185 aa1.54□□□□□ -2.16
SMG1-211ENST00000565324 KRTAP9-3Q9BYQ3 159 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms