RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 NDUFC1O43677 76 aa4.22□□□□□ -1.73
CLN6-203ENST00000563917 ETDBQ3ZM63 59 aa4.22□□□□□ -1.73
CLN6-203ENST00000563917 ATOX1O00244 68 aa4.2□□□□□ -1.74
CLN6-203ENST00000563917 NEBP20929 6669 aa4.19□□□□□ -1.74
CLN6-203ENST00000563917 ACYP1P07311 99 aa4.19□□□□□ -1.74
CLN6-203ENST00000563917 UQCRQO14949 82 aa4.18□□□□□ -1.74
CLN6-203ENST00000563917 HIST1H4AP62805 103 aaKnown RBP4.18□□□□□ -1.74
CLN6-203ENST00000563917 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
CLN6-203ENST00000563917 H0Y9P7 68 aa4.17□□□□□ -1.74
CLN6-203ENST00000563917 A0A087WVE0 104 aa4.16□□□□□ -1.74
CLN6-203ENST00000563917 H0YAA0 97 aa4.16□□□□□ -1.74
CLN6-203ENST00000563917 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
CLN6-203ENST00000563917 A8MUN3 132 aa4.15□□□□□ -1.75
CLN6-203ENST00000563917 H3BS24 57 aa4.14□□□□□ -1.75
CLN6-203ENST00000563917 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
CLN6-203ENST00000563917 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
CLN6-203ENST00000563917 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
CLN6-203ENST00000563917 PCP4L1A6NKN8 68 aa4.12□□□□□ -1.75
CLN6-203ENST00000563917 ADM2Q7Z4H4 148 aa4.12□□□□□ -1.75
CLN6-203ENST00000563917 FAM240AA0A1B0GVK7 77 aa4.11□□□□□ -1.75
CLN6-203ENST00000563917 PCP4P48539 62 aa4.11□□□□□ -1.75
CLN6-203ENST00000563917 PLAC4Q8WY50 150 aa4.11□□□□□ -1.75
CLN6-203ENST00000563917 MP68P56378 58 aa4.1□□□□□ -1.75
CLN6-203ENST00000563917 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
CLN6-203ENST00000563917 C20orf197Q8N268 126 aa4.09□□□□□ -1.75
CLN6-203ENST00000563917 R4GN34 69 aa4.07□□□□□ -1.76
CLN6-203ENST00000563917 LINC00643Q86TS7 51 aa4.05□□□□□ -1.76
CLN6-203ENST00000563917 KMT2DO14686 5537 aa4.05□□□□□ -1.76
CLN6-203ENST00000563917 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
CLN6-203ENST00000563917 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
CLN6-203ENST00000563917 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
CLN6-203ENST00000563917 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
CLN6-203ENST00000563917 M0QZ58 72 aa4.01□□□□□ -1.77
CLN6-203ENST00000563917 SPRR2EP22531 72 aa4.01□□□□□ -1.77
CLN6-203ENST00000563917 SPRR2BP35325 72 aa4.01□□□□□ -1.77
CLN6-203ENST00000563917 SPRR2AP35326 72 aa4.01□□□□□ -1.77
CLN6-203ENST00000563917 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
CLN6-203ENST00000563917 H3BPC8 53 aa3.99□□□□□ -1.77
CLN6-203ENST00000563917 OCR1Q9BZK8 76 aa3.99□□□□□ -1.77
CLN6-203ENST00000563917 SCGB1A1P11684 91 aa3.98□□□□□ -1.77
CLN6-203ENST00000563917 MT1XP80297 61 aa3.98□□□□□ -1.77
CLN6-203ENST00000563917 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
CLN6-203ENST00000563917 P0C880 135 aa3.96□□□□□ -1.78
CLN6-203ENST00000563917 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
CLN6-203ENST00000563917 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
CLN6-203ENST00000563917 J3QR89 54 aa3.94□□□□□ -1.78
CLN6-203ENST00000563917 SPTSSBQ8NFR3 76 aa3.92□□□□□ -1.78
CLN6-203ENST00000563917 MT-ATP8P03928 68 aa3.91□□□□□ -1.78
CLN6-203ENST00000563917 TRAV7A0A075B6U4 112 aa3.9□□□□□ -1.79
CLN6-203ENST00000563917 ACYP2P14621 99 aa3.89□□□□□ -1.79
CLN6-203ENST00000563917 SPRR2DP22532 72 aa3.88□□□□□ -1.79
CLN6-203ENST00000563917 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
CLN6-203ENST00000563917 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
CLN6-203ENST00000563917 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
CLN6-203ENST00000563917 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
CLN6-203ENST00000563917 CHKB-CPT1BH3BT56 60 aa3.85□□□□□ -1.79
CLN6-203ENST00000563917 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
CLN6-203ENST00000563917 A0A1B0GV90 55 aa3.84□□□□□ -1.79
CLN6-203ENST00000563917 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
CLN6-203ENST00000563917 SMIM20Q8N5G0 67 aa3.82□□□□□ -1.8
CLN6-203ENST00000563917 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
CLN6-203ENST00000563917 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
CLN6-203ENST00000563917 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
CLN6-203ENST00000563917 SEC61GP60059 68 aa3.75□□□□□ -1.81
CLN6-203ENST00000563917 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
CLN6-203ENST00000563917 K7ERU9 68 aa3.7□□□□□ -1.82
CLN6-203ENST00000563917 SNURFQ9Y675 71 aa3.7□□□□□ -1.82
CLN6-203ENST00000563917 SPANXA2-OT1Q8N9U9 137 aa3.69□□□□□ -1.82
CLN6-203ENST00000563917 SERP1Q9Y6X1 66 aa3.65□□□□□ -1.83
CLN6-203ENST00000563917 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
CLN6-203ENST00000563917 SERP2Q8N6R1 65 aa3.61□□□□□ -1.83
CLN6-203ENST00000563917 A0A0D9SG42 100 aa3.6□□□□□ -1.83
CLN6-203ENST00000563917 COA5Q86WW8 74 aa3.59□□□□□ -1.83
CLN6-203ENST00000563917 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
CLN6-203ENST00000563917 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
CLN6-203ENST00000563917 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
CLN6-203ENST00000563917 MT1EP04732 61 aa3.55□□□□□ -1.84
CLN6-203ENST00000563917 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
CLN6-203ENST00000563917 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
CLN6-203ENST00000563917 A0A1B0GU33 70 aa3.54□□□□□ -1.84
CLN6-203ENST00000563917 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
CLN6-203ENST00000563917 SPATA8Q6RVD6 105 aa3.53□□□□□ -1.84
CLN6-203ENST00000563917 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
CLN6-203ENST00000563917 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
CLN6-203ENST00000563917 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
CLN6-203ENST00000563917 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
CLN6-203ENST00000563917 MT1GP13640 62 aa3.49□□□□□ -1.85
CLN6-203ENST00000563917 SMIM26A0A096LP01 95 aa3.48□□□□□ -1.85
CLN6-203ENST00000563917 V9GYY9 64 aa3.48□□□□□ -1.85
CLN6-203ENST00000563917 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
CLN6-203ENST00000563917 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
CLN6-203ENST00000563917 A0A1B0GU69 56 aa3.45□□□□□ -1.86
CLN6-203ENST00000563917 COX7CP15954 63 aa3.45□□□□□ -1.86
CLN6-203ENST00000563917 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
CLN6-203ENST00000563917 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
CLN6-203ENST00000563917 H7BZZ5 65 aa3.4□□□□□ -1.87
CLN6-203ENST00000563917 TNP1P09430 55 aa3.4□□□□□ -1.87
CLN6-203ENST00000563917 MT1MQ8N339 61 aa3.4□□□□□ -1.87
CLN6-203ENST00000563917 MT4P47944 62 aa3.39□□□□□ -1.87
CLN6-203ENST00000563917 MT1LQ93083 61 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms