RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 Q6ZQT0 140 aa4.24□□□□□ -1.73
HDGFL3-204ENST00000563790 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
HDGFL3-204ENST00000563790 SCGB1C2P0DMR2 95 aa4.23□□□□□ -1.73
HDGFL3-204ENST00000563790 K7ERJ3 54 aa4.22□□□□□ -1.73
HDGFL3-204ENST00000563790 Q6ZVQ6 151 aa4.22□□□□□ -1.73
HDGFL3-204ENST00000563790 VPS25Q9BRG1 176 aa4.2□□□□□ -1.74
HDGFL3-204ENST00000563790 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
HDGFL3-204ENST00000563790 M0R143 59 aa4.18□□□□□ -1.74
HDGFL3-204ENST00000563790 Q5W150 140 aa4.18□□□□□ -1.74
HDGFL3-204ENST00000563790 CYSTM1Q9H1C7 97 aa4.18□□□□□ -1.74
HDGFL3-204ENST00000563790 NDUFB1O75438 58 aa4.17□□□□□ -1.74
HDGFL3-204ENST00000563790 LYRM7Q5U5X0 104 aa4.17□□□□□ -1.74
HDGFL3-204ENST00000563790 PRR15Q8IV56 129 aa4.17□□□□□ -1.74
HDGFL3-204ENST00000563790 DSCR8Q96T75 97 aa4.17□□□□□ -1.74
HDGFL3-204ENST00000563790 BAALC-AS2P0C853 105 aa4.16□□□□□ -1.74
HDGFL3-204ENST00000563790 C5orf47Q569G3 176 aa4.16□□□□□ -1.74
HDGFL3-204ENST00000563790 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
HDGFL3-204ENST00000563790 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
HDGFL3-204ENST00000563790 MRPL34Q9BQ48 92 aaKnown RBP4.16□□□□□ -1.74
HDGFL3-204ENST00000563790 TMEM254Q8TBM7 123 aa4.15□□□□□ -1.75
HDGFL3-204ENST00000563790 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
HDGFL3-204ENST00000563790 SMIM6P0DI80 62 aa4.14□□□□□ -1.75
HDGFL3-204ENST00000563790 C9JAW5 83 aa4.13□□□□□ -1.75
HDGFL3-204ENST00000563790 ATXN8Q156A1 80 aa4.13□□□□□ -1.75
HDGFL3-204ENST00000563790 C4orf26Q17RF5 130 aa4.13□□□□□ -1.75
HDGFL3-204ENST00000563790 TSTD3H0UI37 97 aa4.12□□□□□ -1.75
HDGFL3-204ENST00000563790 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
HDGFL3-204ENST00000563790 C7orf65Q6ZTY9 151 aa4.12□□□□□ -1.75
HDGFL3-204ENST00000563790 LOC110117498A0A087WWA1 95 aa4.11□□□□□ -1.75
HDGFL3-204ENST00000563790 A0A1B0GW54 56 aa4.11□□□□□ -1.75
HDGFL3-204ENST00000563790 JMJD7-PLA2G4BH0Y9G9 81 aa4.11□□□□□ -1.75
HDGFL3-204ENST00000563790 KLKP1Q107X0 134 aa4.11□□□□□ -1.75
HDGFL3-204ENST00000563790 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
HDGFL3-204ENST00000563790 K7EQZ3 153 aa4.09□□□□□ -1.75
HDGFL3-204ENST00000563790 PDE6GP18545 87 aa4.09□□□□□ -1.75
HDGFL3-204ENST00000563790 LCA10Q71F78 164 aa4.09□□□□□ -1.75
HDGFL3-204ENST00000563790 NAA38Q9BRA0 125 aaKnown RBP4.08□□□□□ -1.76
HDGFL3-204ENST00000563790 BATFQ16520 125 aa4.07□□□□□ -1.76
HDGFL3-204ENST00000563790 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
HDGFL3-204ENST00000563790 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
HDGFL3-204ENST00000563790 S4R3F8 94 aa4.06□□□□□ -1.76
HDGFL3-204ENST00000563790 NDUFS5O43920 106 aa4.04□□□□□ -1.76
HDGFL3-204ENST00000563790 NREPQ16612 68 aa4.03□□□□□ -1.76
HDGFL3-204ENST00000563790 C14orf132Q9NPU4 83 aa4.03□□□□□ -1.76
HDGFL3-204ENST00000563790 LOC105371267A0A1B0GV96 52 aa4.02□□□□□ -1.77
HDGFL3-204ENST00000563790 H3BT86 120 aa4.01□□□□□ -1.77
HDGFL3-204ENST00000563790 A0A1W2PPM0 123 aa4□□□□□ -1.77
HDGFL3-204ENST00000563790 CRIPTQ9P021 101 aa4□□□□□ -1.77
HDGFL3-204ENST00000563790 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
HDGFL3-204ENST00000563790 TAX1BP3O14907 124 aa3.99□□□□□ -1.77
HDGFL3-204ENST00000563790 C1orf64Q8NEQ6 169 aa3.99□□□□□ -1.77
HDGFL3-204ENST00000563790 A0A087WVE0 104 aa3.98□□□□□ -1.77
HDGFL3-204ENST00000563790 HCG22E2RYF7 251 aa3.98□□□□□ -1.77
HDGFL3-204ENST00000563790 Q8N9L7 120 aa3.97□□□□□ -1.77
HDGFL3-204ENST00000563790 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
HDGFL3-204ENST00000563790 CASC2Q6XLA1 102 aa3.96□□□□□ -1.78
HDGFL3-204ENST00000563790 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
HDGFL3-204ENST00000563790 SPCS1Q9Y6A9 102 aa3.96□□□□□ -1.78
HDGFL3-204ENST00000563790 BPY2O14599 106 aa3.95□□□□□ -1.78
HDGFL3-204ENST00000563790 CXCL6P80162 114 aa3.95□□□□□ -1.78
HDGFL3-204ENST00000563790 COL5A1-AS1Q5SY13 56 aa3.94□□□□□ -1.78
HDGFL3-204ENST00000563790 H0YAA0 97 aa3.93□□□□□ -1.78
HDGFL3-204ENST00000563790 MT1EP04732 61 aa3.93□□□□□ -1.78
HDGFL3-204ENST00000563790 MT1GP13640 62 aa3.92□□□□□ -1.78
HDGFL3-204ENST00000563790 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
HDGFL3-204ENST00000563790 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
HDGFL3-204ENST00000563790 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
HDGFL3-204ENST00000563790 UBL5Q9BZL1 73 aa3.89□□□□□ -1.79
HDGFL3-204ENST00000563790 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
HDGFL3-204ENST00000563790 K7EP34 96 aa3.88□□□□□ -1.79
HDGFL3-204ENST00000563790 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
HDGFL3-204ENST00000563790 GTF2H5Q6ZYL4 71 aa3.88□□□□□ -1.79
HDGFL3-204ENST00000563790 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
HDGFL3-204ENST00000563790 PRO0461Q9UI25 63 aa3.86□□□□□ -1.79
HDGFL3-204ENST00000563790 F8W1H4 67 aa3.84□□□□□ -1.79
HDGFL3-204ENST00000563790 MT1MQ8N339 61 aa3.84□□□□□ -1.79
HDGFL3-204ENST00000563790 A8MUN3 132 aa3.83□□□□□ -1.8
HDGFL3-204ENST00000563790 CYP4F30PQ9H0H9 118 aa3.82□□□□□ -1.8
HDGFL3-204ENST00000563790 V9GYY9 64 aa3.81□□□□□ -1.8
HDGFL3-204ENST00000563790 ETDBQ3ZM63 59 aa3.8□□□□□ -1.8
HDGFL3-204ENST00000563790 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
HDGFL3-204ENST00000563790 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
HDGFL3-204ENST00000563790 TP53AIP1Q9HCN2 124 aa3.79□□□□□ -1.8
HDGFL3-204ENST00000563790 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
HDGFL3-204ENST00000563790 ACYP1P07311 99 aa3.76□□□□□ -1.81
HDGFL3-204ENST00000563790 MT3P25713 68 aa3.76□□□□□ -1.81
HDGFL3-204ENST00000563790 NDUFC1O43677 76 aa3.74□□□□□ -1.81
HDGFL3-204ENST00000563790 P0C880 135 aa3.73□□□□□ -1.81
HDGFL3-204ENST00000563790 ATP5EP2Q5VTU8 51 aa3.71□□□□□ -1.82
HDGFL3-204ENST00000563790 FAM240AA0A1B0GVK7 77 aa3.7□□□□□ -1.82
HDGFL3-204ENST00000563790 LOC101927531A0A1B0GV80 90 aa3.69□□□□□ -1.82
HDGFL3-204ENST00000563790 HIST1H4AP62805 103 aaKnown RBP3.69□□□□□ -1.82
HDGFL3-204ENST00000563790 TRAV22A0A0B4J277 110 aa3.68□□□□□ -1.82
HDGFL3-204ENST00000563790 R4GN34 69 aa3.68□□□□□ -1.82
HDGFL3-204ENST00000563790 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
HDGFL3-204ENST00000563790 M0QZ58 72 aa3.66□□□□□ -1.82
HDGFL3-204ENST00000563790 UQCRQO14949 82 aa3.66□□□□□ -1.82
HDGFL3-204ENST00000563790 ATOX1O00244 68 aa3.65□□□□□ -1.83
HDGFL3-204ENST00000563790 LINC00643Q86TS7 51 aa3.65□□□□□ -1.83
HDGFL3-204ENST00000563790 H0Y9P7 68 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms