RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 PKD1P98161 4303 aa2.77□□□□□ -1.97
TCF4-218ENST00000563686 COL6A5A8TX70 2615 aa2.77□□□□□ -1.97
TCF4-218ENST00000563686 NF1P21359 2839 aa2.77□□□□□ -1.97
TCF4-218ENST00000563686 KRTAP3-2Q9BYR7 98 aa2.76□□□□□ -1.97
TCF4-218ENST00000563686 CSMD3Q7Z407 3707 aa2.75□□□□□ -1.97
TCF4-218ENST00000563686 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
TCF4-218ENST00000563686 STAB1Q9NY15 2570 aa2.75□□□□□ -1.97
TCF4-218ENST00000563686 VPS13BQ7Z7G8 4022 aa2.74□□□□□ -1.97
TCF4-218ENST00000563686 HSPG2P98160 4391 aa2.73□□□□□ -1.97
TCF4-218ENST00000563686 MT1HL1P0DM35 61 aa2.72□□□□□ -1.97
TCF4-218ENST00000563686 INE1O15225 51 aa2.71□□□□□ -1.98
TCF4-218ENST00000563686 DNHD1Q96M86 4753 aa2.69□□□□□ -1.98
TCF4-218ENST00000563686 NOTCH1P46531 2555 aa2.69□□□□□ -1.98
TCF4-218ENST00000563686 TENM3Q9P273 2699 aa2.68□□□□□ -1.98
TCF4-218ENST00000563686 TNXBP22105 4242 aa2.68□□□□□ -1.98
TCF4-218ENST00000563686 LRP1BQ9NZR2 4599 aa2.68□□□□□ -1.98
TCF4-218ENST00000563686 KRTAP15-1Q3LI76 137 aa2.68□□□□□ -1.98
TCF4-218ENST00000563686 FAT1Q14517 4588 aa2.68□□□□□ -1.98
TCF4-218ENST00000563686 FBN3Q75N90 2809 aa2.67□□□□□ -1.98
TCF4-218ENST00000563686 TENM1Q9UKZ4 2725 aa2.67□□□□□ -1.98
TCF4-218ENST00000563686 TENM2Q9NT68 2774 aa2.66□□□□□ -1.98
TCF4-218ENST00000563686 NBEAL1Q6ZS30 2694 aa2.65□□□□□ -1.99
TCF4-218ENST00000563686 MUC17Q685J3 4493 aa2.65□□□□□ -1.99
TCF4-218ENST00000563686 VWFP04275 2813 aa2.64□□□□□ -1.99
TCF4-218ENST00000563686 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
TCF4-218ENST00000563686 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
TCF4-218ENST00000563686 KRTAP4-5Q9BYR2 181 aa2.58□□□□□ -2
TCF4-218ENST00000563686 HYDINQ4G0P3 5121 aa2.58□□□□□ -2
TCF4-218ENST00000563686 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
TCF4-218ENST00000563686 MEGF8Q7Z7M0 2845 aa2.57□□□□□ -2
TCF4-218ENST00000563686 PKD1L1Q8TDX9 2849 aa2.56□□□□□ -2
TCF4-218ENST00000563686 TGP01266 2768 aa2.55□□□□□ -2
TCF4-218ENST00000563686 KRTAP23-1A1A580 65 aa2.55□□□□□ -2
TCF4-218ENST00000563686 STAB2Q8WWQ8 2551 aa2.55□□□□□ -2
TCF4-218ENST00000563686 LORP23490 312 aaPredicted RBP2.54□□□□□ -2
TCF4-218ENST00000563686 LRP1Q07954 4544 aaKnown RBP2.5□□□□□ -2.01
TCF4-218ENST00000563686 DMBT1Q9UGM3 2413 aaPredicted RBP2.5□□□□□ -2.01
TCF4-218ENST00000563686 KRTAP4-1Q9BYQ7 146 aa2.5□□□□□ -2.01
TCF4-218ENST00000563686 KRTAP17-1Q9BYP8 105 aa2.46□□□□□ -2.02
TCF4-218ENST00000563686 RYR2Q92736 4967 aa2.46□□□□□ -2.02
TCF4-218ENST00000563686 FLG2Q5D862 2391 aaPredicted RBP2.44□□□□□ -2.02
TCF4-218ENST00000563686 SRRM2Q9UQ35 2752 aaKnown RBP2.44□□□□□ -2.02
TCF4-218ENST00000563686 CRCT1Q9UGL9 99 aa2.44□□□□□ -2.02
TCF4-218ENST00000563686 MYCBP2O75592 4640 aa2.44□□□□□ -2.02
TCF4-218ENST00000563686 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
TCF4-218ENST00000563686 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
TCF4-218ENST00000563686 KRTAP10-12P60413 245 aa2.41□□□□□ -2.02
TCF4-218ENST00000563686 MT1HP80294 61 aa2.38□□□□□ -2.03
TCF4-218ENST00000563686 RYR3Q15413 4870 aa2.38□□□□□ -2.03
TCF4-218ENST00000563686 BIRC6Q9NR09 4857 aa2.37□□□□□ -2.03
TCF4-218ENST00000563686 SPRR2GQ9BYE4 73 aa2.36□□□□□ -2.03
TCF4-218ENST00000563686 HERC1Q15751 4861 aa2.36□□□□□ -2.03
TCF4-218ENST00000563686 KMT2CQ8NEZ4 4911 aaKnown RBP2.35□□□□□ -2.03
TCF4-218ENST00000563686 KRTAP19-4Q3LI73 84 aa2.35□□□□□ -2.03
TCF4-218ENST00000563686 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
TCF4-218ENST00000563686 LPAP08519 4548 aa2.34□□□□□ -2.03
TCF4-218ENST00000563686 RYR1P21817 5038 aa2.34□□□□□ -2.04
TCF4-218ENST00000563686 LCE2DQ5TA82 110 aaPredicted RBP2.32□□□□□ -2.04
TCF4-218ENST00000563686 EPPK1P58107 5090 aaKnown RBP2.31□□□□□ -2.04
TCF4-218ENST00000563686 MT2AP02795 61 aa2.31□□□□□ -2.04
TCF4-218ENST00000563686 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
TCF4-218ENST00000563686 MT1FP04733 61 aa2.29□□□□□ -2.04
TCF4-218ENST00000563686 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
TCF4-218ENST00000563686 HERC2O95714 4834 aa2.22□□□□□ -2.05
TCF4-218ENST00000563686 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
TCF4-218ENST00000563686 KRTAP19-1Q8IUB9 90 aa2.21□□□□□ -2.06
TCF4-218ENST00000563686 LCE2CQ5TA81 110 aa2.21□□□□□ -2.06
TCF4-218ENST00000563686 SPRR5A0A1B0GTR4 108 aa2.2□□□□□ -2.06
TCF4-218ENST00000563686 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
TCF4-218ENST00000563686 KRTAP10-5P60370 271 aa2.18□□□□□ -2.06
TCF4-218ENST00000563686 MT1XP80297 61 aa2.18□□□□□ -2.06
TCF4-218ENST00000563686 LCE3CQ5T5A8 94 aa2.18□□□□□ -2.06
TCF4-218ENST00000563686 PCLOQ9Y6V0 5065 aa2.18□□□□□ -2.06
TCF4-218ENST00000563686 KRTAP10-7P60409 375 aaPredicted RBP2.17□□□□□ -2.06
TCF4-218ENST00000563686 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
TCF4-218ENST00000563686 KRTAP9-8Q9BYQ0 159 aa2.17□□□□□ -2.06
TCF4-218ENST00000563686 MT1BP07438 61 aa2.15□□□□□ -2.06
TCF4-218ENST00000563686 KIAA1109Q2LD37 5005 aa2.14□□□□□ -2.07
TCF4-218ENST00000563686 ABCA13Q86UQ4 5058 aa2.13□□□□□ -2.07
TCF4-218ENST00000563686 KRTAP9-3Q9BYQ3 159 aa2.11□□□□□ -2.07
TCF4-218ENST00000563686 LRP2P98164 4655 aa2.1□□□□□ -2.07
TCF4-218ENST00000563686 LCE2BO14633 110 aa2.04□□□□□ -2.08
TCF4-218ENST00000563686 MT3P25713 68 aa2.03□□□□□ -2.08
TCF4-218ENST00000563686 KRTAP9-2Q9BYQ4 174 aa2.02□□□□□ -2.09
TCF4-218ENST00000563686 KRTAP4-8A0A0G2JLE6 195 aa1.97□□□□□ -2.09
TCF4-218ENST00000563686 KRTAP4-8Q9BYQ9 185 aa1.97□□□□□ -2.09
TCF4-218ENST00000563686 KRTAP9-6A0A140TA67 174 aa1.96□□□□□ -2.1
TCF4-218ENST00000563686 HMCN2Q8NDA2 5059 aa1.96□□□□□ -2.1
TCF4-218ENST00000563686 LCE2AQ5TA79 106 aaPredicted RBP1.95□□□□□ -2.1
TCF4-218ENST00000563686 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
TCF4-218ENST00000563686 MT1LQ93083 61 aa1.93□□□□□ -2.1
TCF4-218ENST00000563686 MT1GP13640 62 aa1.93□□□□□ -2.1
TCF4-218ENST00000563686 MT1EP04732 61 aa1.92□□□□□ -2.1
TCF4-218ENST00000563686 UBR4Q5T4S7 5183 aa1.91□□□□□ -2.1
TCF4-218ENST00000563686 SPRR2EP22531 72 aa1.91□□□□□ -2.1
TCF4-218ENST00000563686 SPRR2BP35325 72 aa1.91□□□□□ -2.1
TCF4-218ENST00000563686 SPRR2AP35326 72 aa1.91□□□□□ -2.1
TCF4-218ENST00000563686 KRTAP4-7Q9BYR0 210 aa1.89□□□□□ -2.11
TCF4-218ENST00000563686 RNF213Q63HN8 5207 aa1.88□□□□□ -2.11
TCF4-218ENST00000563686 KRTAP19-6Q3LI70 58 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms