RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 PRR4Q16378 134 aa5.28□□□□□ -1.56
UBFD1-202ENST00000563366 TPRXLQ17RH7 258 aa5.27□□□□□ -1.57
UBFD1-202ENST00000563366 Q5W150 140 aa5.27□□□□□ -1.57
UBFD1-202ENST00000563366 SPANXA2-OT1Q8N9U9 137 aa5.27□□□□□ -1.57
UBFD1-202ENST00000563366 C7orf65Q6ZTY9 151 aa5.24□□□□□ -1.57
UBFD1-202ENST00000563366 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
UBFD1-202ENST00000563366 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
UBFD1-202ENST00000563366 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
UBFD1-202ENST00000563366 ATP11AUNQ6ZP68 121 aa5.23□□□□□ -1.57
UBFD1-202ENST00000563366 PCOTHQ58A44 107 aa5.21□□□□□ -1.58
UBFD1-202ENST00000563366 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
UBFD1-202ENST00000563366 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
UBFD1-202ENST00000563366 SEC61GP60059 68 aa5.17□□□□□ -1.58
UBFD1-202ENST00000563366 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
UBFD1-202ENST00000563366 HRES1P13985 223 aa5.15□□□□□ -1.59
UBFD1-202ENST00000563366 PCLOQ9Y6V0 5065 aa5.13□□□□□ -1.59
UBFD1-202ENST00000563366 SPINK7P58062 85 aa5.13□□□□□ -1.59
UBFD1-202ENST00000563366 A8MUN3 132 aa5.12□□□□□ -1.59
UBFD1-202ENST00000563366 ACYP2P14621 99 aa5.11□□□□□ -1.59
UBFD1-202ENST00000563366 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
UBFD1-202ENST00000563366 SMIM26A0A096LP01 95 aa5.05□□□□□ -1.6
UBFD1-202ENST00000563366 C4orf26Q17RF5 130 aa5.05□□□□□ -1.6
UBFD1-202ENST00000563366 COA5Q86WW8 74 aa5.05□□□□□ -1.6
UBFD1-202ENST00000563366 CHKB-CPT1BH3BT56 60 aa5.03□□□□□ -1.6
UBFD1-202ENST00000563366 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
UBFD1-202ENST00000563366 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
UBFD1-202ENST00000563366 V9GYY9 64 aa5□□□□□ -1.61
UBFD1-202ENST00000563366 SPTSSBQ8NFR3 76 aa4.99□□□□□ -1.61
UBFD1-202ENST00000563366 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
UBFD1-202ENST00000563366 LPAP08519 4548 aa4.98□□□□□ -1.61
UBFD1-202ENST00000563366 LRP2P98164 4655 aa4.97□□□□□ -1.61
UBFD1-202ENST00000563366 Q1T7F1 81 aa4.94□□□□□ -1.62
UBFD1-202ENST00000563366 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
UBFD1-202ENST00000563366 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
UBFD1-202ENST00000563366 HERC1Q15751 4861 aa4.91□□□□□ -1.62
UBFD1-202ENST00000563366 H1FX-AS1Q4G0G2 97 aa4.9□□□□□ -1.63
UBFD1-202ENST00000563366 MUC17Q685J3 4493 aa4.89□□□□□ -1.63
UBFD1-202ENST00000563366 MT3P25713 68 aa4.88□□□□□ -1.63
UBFD1-202ENST00000563366 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
UBFD1-202ENST00000563366 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
UBFD1-202ENST00000563366 S4R3F8 94 aa4.88□□□□□ -1.63
UBFD1-202ENST00000563366 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
UBFD1-202ENST00000563366 A0A1B0GU69 56 aa4.82□□□□□ -1.64
UBFD1-202ENST00000563366 LCA10Q71F78 164 aa4.82□□□□□ -1.64
UBFD1-202ENST00000563366 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
UBFD1-202ENST00000563366 PSPHP1O15172 72 aa4.8□□□□□ -1.64
UBFD1-202ENST00000563366 CSAG1Q6PB30 78 aa4.78□□□□□ -1.64
UBFD1-202ENST00000563366 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
UBFD1-202ENST00000563366 Q5VV11 94 aa4.76□□□□□ -1.65
UBFD1-202ENST00000563366 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
UBFD1-202ENST00000563366 KRTAP19-2Q3LHN2 52 aa4.72□□□□□ -1.65
UBFD1-202ENST00000563366 A6NED7 52 aa4.71□□□□□ -1.66
UBFD1-202ENST00000563366 H0YAA0 97 aa4.71□□□□□ -1.66
UBFD1-202ENST00000563366 UQCR11O14957 56 aa4.7□□□□□ -1.66
UBFD1-202ENST00000563366 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
UBFD1-202ENST00000563366 MUC2Q02817 5179 aa4.68□□□□□ -1.66
UBFD1-202ENST00000563366 RNF213Q63HN8 5207 aa4.67□□□□□ -1.66
UBFD1-202ENST00000563366 A0A1B0GU33 70 aa4.66□□□□□ -1.66
UBFD1-202ENST00000563366 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
UBFD1-202ENST00000563366 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
UBFD1-202ENST00000563366 ADM2Q7Z4H4 148 aa4.63□□□□□ -1.67
UBFD1-202ENST00000563366 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
UBFD1-202ENST00000563366 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
UBFD1-202ENST00000563366 KRTAP10-6P60371 365 aaPredicted RBP4.61□□□□□ -1.67
UBFD1-202ENST00000563366 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
UBFD1-202ENST00000563366 SPATA8Q6RVD6 105 aa4.59□□□□□ -1.67
UBFD1-202ENST00000563366 M0R2T5 61 aa4.57□□□□□ -1.68
UBFD1-202ENST00000563366 P0C880 135 aa4.57□□□□□ -1.68
UBFD1-202ENST00000563366 M0QZ58 72 aa4.56□□□□□ -1.68
UBFD1-202ENST00000563366 MT1HP80294 61 aa4.55□□□□□ -1.68
UBFD1-202ENST00000563366 CRIPTQ9P021 101 aa4.52□□□□□ -1.69
UBFD1-202ENST00000563366 R4GN34 69 aa4.52□□□□□ -1.69
UBFD1-202ENST00000563366 K7ERS5 55 aa4.49□□□□□ -1.69
UBFD1-202ENST00000563366 FAT4Q6V0I7 4981 aa4.47□□□□□ -1.69
UBFD1-202ENST00000563366 A8MU10 97 aa4.46□□□□□ -1.7
UBFD1-202ENST00000563366 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
UBFD1-202ENST00000563366 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
UBFD1-202ENST00000563366 A0A0D9SG42 100 aa4.42□□□□□ -1.7
UBFD1-202ENST00000563366 A6NN06 94 aa4.39□□□□□ -1.71
UBFD1-202ENST00000563366 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
UBFD1-202ENST00000563366 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
UBFD1-202ENST00000563366 MT2AP02795 61 aa4.37□□□□□ -1.71
UBFD1-202ENST00000563366 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
UBFD1-202ENST00000563366 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
UBFD1-202ENST00000563366 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
UBFD1-202ENST00000563366 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
UBFD1-202ENST00000563366 MT1FP04733 61 aa4.33□□□□□ -1.72
UBFD1-202ENST00000563366 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
UBFD1-202ENST00000563366 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
UBFD1-202ENST00000563366 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
UBFD1-202ENST00000563366 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
UBFD1-202ENST00000563366 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
UBFD1-202ENST00000563366 ROMO1P60602 79 aa4.23□□□□□ -1.73
UBFD1-202ENST00000563366 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
UBFD1-202ENST00000563366 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
UBFD1-202ENST00000563366 MT1BP07438 61 aa4.11□□□□□ -1.75
UBFD1-202ENST00000563366 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
UBFD1-202ENST00000563366 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
UBFD1-202ENST00000563366 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
UBFD1-202ENST00000563366 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms