RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 LCE3BQ5TA77 95 aa4.07□□□□□ -1.76
UBR1-204ENST00000563239 J3QR89 54 aa4.06□□□□□ -1.76
UBR1-204ENST00000563239 UQCRQO14949 82 aa4.06□□□□□ -1.76
UBR1-204ENST00000563239 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
UBR1-204ENST00000563239 C1orf64Q8NEQ6 169 aa4.05□□□□□ -1.76
UBR1-204ENST00000563239 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
UBR1-204ENST00000563239 H0Y9P7 68 aa4.03□□□□□ -1.76
UBR1-204ENST00000563239 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
UBR1-204ENST00000563239 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
UBR1-204ENST00000563239 ATOX1O00244 68 aa4□□□□□ -1.77
UBR1-204ENST00000563239 LCA10Q71F78 164 aa4□□□□□ -1.77
UBR1-204ENST00000563239 C5orf47Q569G3 176 aa3.99□□□□□ -1.77
UBR1-204ENST00000563239 S4R3F8 94 aa3.99□□□□□ -1.77
UBR1-204ENST00000563239 MT-ATP8P03928 68 aa3.98□□□□□ -1.77
UBR1-204ENST00000563239 KLKP1Q107X0 134 aa3.98□□□□□ -1.77
UBR1-204ENST00000563239 K7ERU9 68 aa3.97□□□□□ -1.77
UBR1-204ENST00000563239 LINC00208Q96KT6 92 aa3.97□□□□□ -1.77
UBR1-204ENST00000563239 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
UBR1-204ENST00000563239 CSAG1Q6PB30 78 aa3.95□□□□□ -1.78
UBR1-204ENST00000563239 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
UBR1-204ENST00000563239 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
UBR1-204ENST00000563239 IMUPQ9GZP8 106 aa3.95□□□□□ -1.78
UBR1-204ENST00000563239 MP68P56378 58 aa3.94□□□□□ -1.78
UBR1-204ENST00000563239 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
UBR1-204ENST00000563239 SCGB1A1P11684 91 aa3.92□□□□□ -1.78
UBR1-204ENST00000563239 H3BPC8 53 aa3.91□□□□□ -1.78
UBR1-204ENST00000563239 FAM236AA0A1B0GUQ0 79 aa3.89□□□□□ -1.79
UBR1-204ENST00000563239 FAM236BA0A1B0GV22 79 aa3.89□□□□□ -1.79
UBR1-204ENST00000563239 A8MUN3 132 aa3.89□□□□□ -1.79
UBR1-204ENST00000563239 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
UBR1-204ENST00000563239 TRAV7A0A075B6U4 112 aa3.87□□□□□ -1.79
UBR1-204ENST00000563239 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
UBR1-204ENST00000563239 NDUFC1O43677 76 aa3.85□□□□□ -1.79
UBR1-204ENST00000563239 SMIM20Q8N5G0 67 aa3.85□□□□□ -1.79
UBR1-204ENST00000563239 DMAC1Q96GE9 116 aa3.85□□□□□ -1.79
UBR1-204ENST00000563239 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
UBR1-204ENST00000563239 H0YAA0 97 aa3.83□□□□□ -1.8
UBR1-204ENST00000563239 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
UBR1-204ENST00000563239 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
UBR1-204ENST00000563239 MT1BP07438 61 aa3.82□□□□□ -1.8
UBR1-204ENST00000563239 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
UBR1-204ENST00000563239 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
UBR1-204ENST00000563239 SNURFQ9Y675 71 aa3.79□□□□□ -1.8
UBR1-204ENST00000563239 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
UBR1-204ENST00000563239 ADM2Q7Z4H4 148 aa3.78□□□□□ -1.8
UBR1-204ENST00000563239 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
UBR1-204ENST00000563239 CRIPTQ9P021 101 aa3.78□□□□□ -1.8
UBR1-204ENST00000563239 KMT2DO14686 5537 aa3.78□□□□□ -1.81
UBR1-204ENST00000563239 Q5VV11 94 aa3.76□□□□□ -1.81
UBR1-204ENST00000563239 C20orf197Q8N268 126 aa3.75□□□□□ -1.81
UBR1-204ENST00000563239 P0C880 135 aa3.74□□□□□ -1.81
UBR1-204ENST00000563239 ACYP2P14621 99 aa3.74□□□□□ -1.81
UBR1-204ENST00000563239 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
UBR1-204ENST00000563239 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
UBR1-204ENST00000563239 SPANXA2-OT1Q8N9U9 137 aa3.71□□□□□ -1.82
UBR1-204ENST00000563239 COX7CP15954 63 aa3.69□□□□□ -1.82
UBR1-204ENST00000563239 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
UBR1-204ENST00000563239 A6NN06 94 aa3.67□□□□□ -1.82
UBR1-204ENST00000563239 CYSTM1Q9H1C7 97 aa3.67□□□□□ -1.82
UBR1-204ENST00000563239 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
UBR1-204ENST00000563239 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.83
UBR1-204ENST00000563239 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
UBR1-204ENST00000563239 M0QZ58 72 aa3.64□□□□□ -1.83
UBR1-204ENST00000563239 SPTSSBQ8NFR3 76 aa3.64□□□□□ -1.83
UBR1-204ENST00000563239 R4GN34 69 aa3.64□□□□□ -1.83
UBR1-204ENST00000563239 H7BZZ5 65 aa3.63□□□□□ -1.83
UBR1-204ENST00000563239 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
UBR1-204ENST00000563239 MT1XP80297 61 aa3.61□□□□□ -1.83
UBR1-204ENST00000563239 COA5Q86WW8 74 aa3.61□□□□□ -1.83
UBR1-204ENST00000563239 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
UBR1-204ENST00000563239 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
UBR1-204ENST00000563239 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
UBR1-204ENST00000563239 LINC01554Q52M75 96 aa3.57□□□□□ -1.84
UBR1-204ENST00000563239 CCDC179H3BU77 68 aa3.56□□□□□ -1.84
UBR1-204ENST00000563239 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
UBR1-204ENST00000563239 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
UBR1-204ENST00000563239 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
UBR1-204ENST00000563239 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
UBR1-204ENST00000563239 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
UBR1-204ENST00000563239 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
UBR1-204ENST00000563239 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
UBR1-204ENST00000563239 SERP1Q9Y6X1 66 aa3.45□□□□□ -1.86
UBR1-204ENST00000563239 SEC61GP60059 68 aa3.44□□□□□ -1.86
UBR1-204ENST00000563239 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
UBR1-204ENST00000563239 A0A1B0GU33 70 aa3.43□□□□□ -1.86
UBR1-204ENST00000563239 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
UBR1-204ENST00000563239 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
UBR1-204ENST00000563239 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
UBR1-204ENST00000563239 A0A0D9SG42 100 aa3.4□□□□□ -1.87
UBR1-204ENST00000563239 A0A1B0GU69 56 aa3.39□□□□□ -1.87
UBR1-204ENST00000563239 TMEM258P61165 79 aa3.39□□□□□ -1.87
UBR1-204ENST00000563239 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
UBR1-204ENST00000563239 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
UBR1-204ENST00000563239 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
UBR1-204ENST00000563239 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
UBR1-204ENST00000563239 CAMK2N1Q7Z7J9 78 aa3.35□□□□□ -1.87
UBR1-204ENST00000563239 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
UBR1-204ENST00000563239 A8MU10 97 aa3.33□□□□□ -1.88
UBR1-204ENST00000563239 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
UBR1-204ENST00000563239 SMIM26A0A096LP01 95 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms