RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
AC040174.1-201ENST00000563003 KRTAP17-1Q9BYP8 105 aa7.37□□□□□ -1.23
AC040174.1-201ENST00000563003 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
AC040174.1-201ENST00000563003 K7ERS5 55 aa7.35□□□□□ -1.23
AC040174.1-201ENST00000563003 PKHD1L1Q86WI1 4243 aa7.35□□□□□ -1.23
AC040174.1-201ENST00000563003 COX6B2Q6YFQ2 88 aa7.31□□□□□ -1.24
AC040174.1-201ENST00000563003 ABCA13Q86UQ4 5058 aa7.3□□□□□ -1.24
AC040174.1-201ENST00000563003 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
AC040174.1-201ENST00000563003 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
AC040174.1-201ENST00000563003 Q5VSD8 79 aa7.26□□□□□ -1.25
AC040174.1-201ENST00000563003 C9orf92A6NGG3 77 aa7.23□□□□□ -1.25
AC040174.1-201ENST00000563003 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
AC040174.1-201ENST00000563003 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
AC040174.1-201ENST00000563003 TPRXLQ17RH7 258 aa7.19□□□□□ -1.26
AC040174.1-201ENST00000563003 MYCBP2O75592 4640 aa7.19□□□□□ -1.26
AC040174.1-201ENST00000563003 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
AC040174.1-201ENST00000563003 TNXBP22105 4242 aa7.18□□□□□ -1.26
AC040174.1-201ENST00000563003 KRTAP10-8P60410 259 aa7.16□□□□□ -1.26
AC040174.1-201ENST00000563003 LRP1Q07954 4544 aaKnown RBP7.14□□□□□ -1.27
AC040174.1-201ENST00000563003 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
AC040174.1-201ENST00000563003 A0A0D9SG42 100 aa7.12□□□□□ -1.27
AC040174.1-201ENST00000563003 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
AC040174.1-201ENST00000563003 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
AC040174.1-201ENST00000563003 FAT3Q8TDW7 4589 aa7.11□□□□□ -1.27
AC040174.1-201ENST00000563003 DMBT1Q9UGM3 2413 aaPredicted RBP7.1□□□□□ -1.27
AC040174.1-201ENST00000563003 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
AC040174.1-201ENST00000563003 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
AC040174.1-201ENST00000563003 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
AC040174.1-201ENST00000563003 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
AC040174.1-201ENST00000563003 HERC1Q15751 4861 aa7.02□□□□□ -1.29
AC040174.1-201ENST00000563003 MT1HL1P0DM35 61 aa7□□□□□ -1.29
AC040174.1-201ENST00000563003 S4R3F8 94 aa6.95□□□□□ -1.3
AC040174.1-201ENST00000563003 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
AC040174.1-201ENST00000563003 XP32Q5T750 250 aa6.86□□□□□ -1.31
AC040174.1-201ENST00000563003 J3QL48 77 aa6.83□□□□□ -1.32
AC040174.1-201ENST00000563003 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
AC040174.1-201ENST00000563003 HMCN2Q8NDA2 5059 aa6.75□□□□□ -1.33
AC040174.1-201ENST00000563003 LRP2P98164 4655 aa6.65□□□□□ -1.34
AC040174.1-201ENST00000563003 M0QZ58 72 aa6.64□□□□□ -1.35
AC040174.1-201ENST00000563003 LPAP08519 4548 aa6.63□□□□□ -1.35
AC040174.1-201ENST00000563003 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
AC040174.1-201ENST00000563003 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
AC040174.1-201ENST00000563003 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
AC040174.1-201ENST00000563003 SEC61BP60468 96 aaKnown RBP6.55□□□□□ -1.36
AC040174.1-201ENST00000563003 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
AC040174.1-201ENST00000563003 RNF213Q63HN8 5207 aa6.44□□□□□ -1.38
AC040174.1-201ENST00000563003 R4GN34 69 aa6.42□□□□□ -1.38
AC040174.1-201ENST00000563003 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
AC040174.1-201ENST00000563003 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
AC040174.1-201ENST00000563003 MUC2Q02817 5179 aa6.36□□□□□ -1.39
AC040174.1-201ENST00000563003 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
AC040174.1-201ENST00000563003 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
AC040174.1-201ENST00000563003 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
AC040174.1-201ENST00000563003 FLGP20930 4061 aaPredicted RBP6.17□□□□□ -1.42
AC040174.1-201ENST00000563003 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.42
AC040174.1-201ENST00000563003 FAT4Q6V0I7 4981 aa6.12□□□□□ -1.43
AC040174.1-201ENST00000563003 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
AC040174.1-201ENST00000563003 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
AC040174.1-201ENST00000563003 TNP1P09430 55 aa5.96□□□□□ -1.46
AC040174.1-201ENST00000563003 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
AC040174.1-201ENST00000563003 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.47
AC040174.1-201ENST00000563003 MT1HP80294 61 aa5.88□□□□□ -1.47
AC040174.1-201ENST00000563003 M0R2T5 61 aa5.86□□□□□ -1.47
AC040174.1-201ENST00000563003 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
AC040174.1-201ENST00000563003 MT2AP02795 61 aa5.7□□□□□ -1.5
AC040174.1-201ENST00000563003 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
AC040174.1-201ENST00000563003 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
AC040174.1-201ENST00000563003 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
AC040174.1-201ENST00000563003 MT1FP04733 61 aa5.67□□□□□ -1.5
AC040174.1-201ENST00000563003 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
AC040174.1-201ENST00000563003 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
AC040174.1-201ENST00000563003 INE1O15225 51 aa5.61□□□□□ -1.51
AC040174.1-201ENST00000563003 KRTAP9-2Q9BYQ4 174 aa5.61□□□□□ -1.51
AC040174.1-201ENST00000563003 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
AC040174.1-201ENST00000563003 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
AC040174.1-201ENST00000563003 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
AC040174.1-201ENST00000563003 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
AC040174.1-201ENST00000563003 KRTAP8-1Q8IUC2 63 aa5.45□□□□□ -1.54
AC040174.1-201ENST00000563003 MT1BP07438 61 aa5.41□□□□□ -1.54
AC040174.1-201ENST00000563003 USH2AO75445 5202 aa5.36□□□□□ -1.55
AC040174.1-201ENST00000563003 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
AC040174.1-201ENST00000563003 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
AC040174.1-201ENST00000563003 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
AC040174.1-201ENST00000563003 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
AC040174.1-201ENST00000563003 LCE2BO14633 110 aa5.29□□□□□ -1.56
AC040174.1-201ENST00000563003 MT1XP80297 61 aa5.29□□□□□ -1.56
AC040174.1-201ENST00000563003 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
AC040174.1-201ENST00000563003 SSPOA2VEC9 5147 aa5.28□□□□□ -1.56
AC040174.1-201ENST00000563003 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
AC040174.1-201ENST00000563003 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
AC040174.1-201ENST00000563003 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
AC040174.1-201ENST00000563003 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
AC040174.1-201ENST00000563003 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
AC040174.1-201ENST00000563003 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
AC040174.1-201ENST00000563003 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
AC040174.1-201ENST00000563003 KMT2DO14686 5537 aa4.94□□□□□ -1.62
AC040174.1-201ENST00000563003 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
AC040174.1-201ENST00000563003 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
AC040174.1-201ENST00000563003 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
AC040174.1-201ENST00000563003 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms