RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 CHKB-CPT1BH3BT56 60 aa7.04□□□□□ -1.28
SPG7-206ENST00000562775 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
SPG7-206ENST00000562775 UBR4Q5T4S7 5183 aa6.99□□□□□ -1.29
SPG7-206ENST00000562775 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
SPG7-206ENST00000562775 SVIPQ8NHG7 77 aa6.99□□□□□ -1.29
SPG7-206ENST00000562775 SMIM26A0A096LP01 95 aa6.98□□□□□ -1.29
SPG7-206ENST00000562775 S4R3F8 94 aa6.96□□□□□ -1.29
SPG7-206ENST00000562775 MUC2Q02817 5179 aa6.95□□□□□ -1.3
SPG7-206ENST00000562775 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
SPG7-206ENST00000562775 RNF213Q63HN8 5207 aa6.94□□□□□ -1.3
SPG7-206ENST00000562775 LCA10Q71F78 164 aa6.94□□□□□ -1.3
SPG7-206ENST00000562775 SPTSSBQ8NFR3 76 aa6.94□□□□□ -1.3
SPG7-206ENST00000562775 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
SPG7-206ENST00000562775 Q1T7F1 81 aa6.85□□□□□ -1.31
SPG7-206ENST00000562775 V9GYY9 64 aa6.85□□□□□ -1.31
SPG7-206ENST00000562775 CSAG1Q6PB30 78 aa6.83□□□□□ -1.32
SPG7-206ENST00000562775 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
SPG7-206ENST00000562775 A0A1B0GU69 56 aa6.74□□□□□ -1.33
SPG7-206ENST00000562775 FLGP20930 4061 aaPredicted RBP6.74□□□□□ -1.33
SPG7-206ENST00000562775 SEC61GP60059 68 aa6.74□□□□□ -1.33
SPG7-206ENST00000562775 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
SPG7-206ENST00000562775 MT1HP80294 61 aa6.72□□□□□ -1.33
SPG7-206ENST00000562775 PSPHP1O15172 72 aa6.71□□□□□ -1.34
SPG7-206ENST00000562775 FAT4Q6V0I7 4981 aa6.7□□□□□ -1.34
SPG7-206ENST00000562775 H0YAA0 97 aa6.68□□□□□ -1.34
SPG7-206ENST00000562775 Q5VV11 94 aa6.66□□□□□ -1.34
SPG7-206ENST00000562775 M0R2T5 61 aa6.65□□□□□ -1.34
SPG7-206ENST00000562775 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
SPG7-206ENST00000562775 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
SPG7-206ENST00000562775 P0C880 135 aa6.59□□□□□ -1.35
SPG7-206ENST00000562775 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
SPG7-206ENST00000562775 A0A1B0GU33 70 aa6.57□□□□□ -1.36
SPG7-206ENST00000562775 UQCR11O14957 56 aa6.52□□□□□ -1.36
SPG7-206ENST00000562775 A6NED7 52 aa6.52□□□□□ -1.37
SPG7-206ENST00000562775 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
SPG7-206ENST00000562775 M0QZ58 72 aa6.44□□□□□ -1.38
SPG7-206ENST00000562775 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
SPG7-206ENST00000562775 MT2AP02795 61 aa6.44□□□□□ -1.38
SPG7-206ENST00000562775 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
SPG7-206ENST00000562775 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
SPG7-206ENST00000562775 CRIPTQ9P021 101 aa6.42□□□□□ -1.38
SPG7-206ENST00000562775 R4GN34 69 aa6.42□□□□□ -1.38
SPG7-206ENST00000562775 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
SPG7-206ENST00000562775 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
SPG7-206ENST00000562775 MT1FP04733 61 aa6.4□□□□□ -1.39
SPG7-206ENST00000562775 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
SPG7-206ENST00000562775 BRK1Q8WUW1 75 aa6.39□□□□□ -1.39
SPG7-206ENST00000562775 A8MU10 97 aa6.34□□□□□ -1.39
SPG7-206ENST00000562775 A0A0D9SG42 100 aa6.3□□□□□ -1.4
SPG7-206ENST00000562775 SPRR2GQ9BYE4 73 aa6.29□□□□□ -1.4
SPG7-206ENST00000562775 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
SPG7-206ENST00000562775 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
SPG7-206ENST00000562775 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
SPG7-206ENST00000562775 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
SPG7-206ENST00000562775 A6NN06 94 aa6.2□□□□□ -1.42
SPG7-206ENST00000562775 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
SPG7-206ENST00000562775 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
SPG7-206ENST00000562775 K7ERS5 55 aa6.18□□□□□ -1.42
SPG7-206ENST00000562775 SPINT4Q6UDR6 99 aa6.17□□□□□ -1.42
SPG7-206ENST00000562775 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
SPG7-206ENST00000562775 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
SPG7-206ENST00000562775 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
SPG7-206ENST00000562775 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
SPG7-206ENST00000562775 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
SPG7-206ENST00000562775 MT1BP07438 61 aa6.05□□□□□ -1.44
SPG7-206ENST00000562775 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
SPG7-206ENST00000562775 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
SPG7-206ENST00000562775 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
SPG7-206ENST00000562775 ROMO1P60602 79 aa5.9□□□□□ -1.46
SPG7-206ENST00000562775 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.46
SPG7-206ENST00000562775 USH2AO75445 5202 aa5.89□□□□□ -1.47
SPG7-206ENST00000562775 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
SPG7-206ENST00000562775 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
SPG7-206ENST00000562775 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
SPG7-206ENST00000562775 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
SPG7-206ENST00000562775 MT1XP80297 61 aa5.83□□□□□ -1.48
SPG7-206ENST00000562775 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
SPG7-206ENST00000562775 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
SPG7-206ENST00000562775 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
SPG7-206ENST00000562775 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
SPG7-206ENST00000562775 TNP1P09430 55 aa5.72□□□□□ -1.49
SPG7-206ENST00000562775 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
SPG7-206ENST00000562775 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
SPG7-206ENST00000562775 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
SPG7-206ENST00000562775 PRAC1Q96KF2 57 aa5.66□□□□□ -1.5
SPG7-206ENST00000562775 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
SPG7-206ENST00000562775 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.52
SPG7-206ENST00000562775 LCE1DQ5T752 114 aa5.55□□□□□ -1.52
SPG7-206ENST00000562775 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
SPG7-206ENST00000562775 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
SPG7-206ENST00000562775 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
SPG7-206ENST00000562775 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
SPG7-206ENST00000562775 LCE3AQ5TA76 89 aa5.46□□□□□ -1.53
SPG7-206ENST00000562775 KRTAP4-2Q9BYR5 136 aa5.46□□□□□ -1.53
SPG7-206ENST00000562775 FCGBPQ9Y6R7 5405 aaPredicted RBP5.46□□□□□ -1.53
SPG7-206ENST00000562775 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
SPG7-206ENST00000562775 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
SPG7-206ENST00000562775 KMT2DO14686 5537 aa5.3□□□□□ -1.56
SPG7-206ENST00000562775 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
SPG7-206ENST00000562775 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms