RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 PKD1L2Q7Z442 2459 aa2.24□□□□□ -2.05
TCF4-215ENST00000562638 USP9YO00507 2555 aaPredicted RBP2.23□□□□□ -2.05
TCF4-215ENST00000562638 DNAH3Q8TD57 4116 aa2.23□□□□□ -2.05
TCF4-215ENST00000562638 RPS29P62273 56 aaKnown RBP2.23□□□□□ -2.05
TCF4-215ENST00000562638 FBN3Q75N90 2809 aa2.23□□□□□ -2.05
TCF4-215ENST00000562638 PIEZO1Q92508 2521 aa2.22□□□□□ -2.05
TCF4-215ENST00000562638 DMBT1Q9UGM3 2413 aaPredicted RBP2.21□□□□□ -2.06
TCF4-215ENST00000562638 KRTAP10-3P60369 221 aa2.21□□□□□ -2.06
TCF4-215ENST00000562638 FBN2P35556 2912 aa2.21□□□□□ -2.06
TCF4-215ENST00000562638 HUWE1Q7Z6Z7 4374 aaKnown RBP2.2□□□□□ -2.06
TCF4-215ENST00000562638 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
TCF4-215ENST00000562638 EPG5Q9HCE0 2579 aa2.2□□□□□ -2.06
TCF4-215ENST00000562638 LRRK2Q5S007 2527 aa2.19□□□□□ -2.06
TCF4-215ENST00000562638 TTC28Q96AY4 2481 aa2.19□□□□□ -2.06
TCF4-215ENST00000562638 ACANP16112 2415 aa2.18□□□□□ -2.06
TCF4-215ENST00000562638 ITPR2Q14571 2701 aa2.18□□□□□ -2.06
TCF4-215ENST00000562638 PKD1L1Q8TDX9 2849 aa2.18□□□□□ -2.06
TCF4-215ENST00000562638 ZANQ9Y493 2812 aa2.18□□□□□ -2.06
TCF4-215ENST00000562638 SMR3AQ99954 134 aa2.16□□□□□ -2.06
TCF4-215ENST00000562638 APOBP04114 4563 aaKnown RBP2.16□□□□□ -2.06
TCF4-215ENST00000562638 SACSQ9NZJ4 4579 aa2.16□□□□□ -2.06
TCF4-215ENST00000562638 BDP1A6H8Y1 2624 aa2.16□□□□□ -2.06
TCF4-215ENST00000562638 KRTAP1-4P0C5Y4 121 aa2.15□□□□□ -2.07
TCF4-215ENST00000562638 HECTD4Q9Y4D8 3996 aa2.15□□□□□ -2.07
TCF4-215ENST00000562638 ZNF292O60281 2723 aa2.13□□□□□ -2.07
TCF4-215ENST00000562638 STAB2Q8WWQ8 2551 aa2.13□□□□□ -2.07
TCF4-215ENST00000562638 ATRQ13535 2644 aa2.12□□□□□ -2.07
TCF4-215ENST00000562638 KMT2AQ03164 3969 aa2.11□□□□□ -2.07
TCF4-215ENST00000562638 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
TCF4-215ENST00000562638 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
TCF4-215ENST00000562638 USP24Q9UPU5 2620 aa2.11□□□□□ -2.07
TCF4-215ENST00000562638 CACNA1AO00555 2505 aa2.11□□□□□ -2.07
TCF4-215ENST00000562638 TENM3Q9P273 2699 aa2.1□□□□□ -2.07
TCF4-215ENST00000562638 ABCA12Q86UK0 2595 aa2.1□□□□□ -2.07
TCF4-215ENST00000562638 FASNP49327 2511 aaKnown RBP2.1□□□□□ -2.07
TCF4-215ENST00000562638 PKD1P98161 4303 aa2.09□□□□□ -2.08
TCF4-215ENST00000562638 ZNF469Q96JG9 3925 aaPredicted RBP2.08□□□□□ -2.08
TCF4-215ENST00000562638 TEP1Q99973 2627 aaKnown RBP2.08□□□□□ -2.08
TCF4-215ENST00000562638 NOTCH1P46531 2555 aa2.07□□□□□ -2.08
TCF4-215ENST00000562638 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
TCF4-215ENST00000562638 LRP1Q07954 4544 aaKnown RBP2.06□□□□□ -2.08
TCF4-215ENST00000562638 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
TCF4-215ENST00000562638 PKHD1L1Q86WI1 4243 aa2.06□□□□□ -2.08
TCF4-215ENST00000562638 VPS13BQ7Z7G8 4022 aa2.05□□□□□ -2.08
TCF4-215ENST00000562638 FAT3Q8TDW7 4589 aa2.04□□□□□ -2.08
TCF4-215ENST00000562638 ACACBO00763 2458 aa2.04□□□□□ -2.08
TCF4-215ENST00000562638 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
TCF4-215ENST00000562638 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
TCF4-215ENST00000562638 NOTCH2Q04721 2471 aa2.03□□□□□ -2.08
TCF4-215ENST00000562638 C9orf92A6NGG3 77 aa2.03□□□□□ -2.08
TCF4-215ENST00000562638 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
TCF4-215ENST00000562638 TNP1P09430 55 aa2.02□□□□□ -2.09
TCF4-215ENST00000562638 TNXBP22105 4242 aa2.02□□□□□ -2.09
TCF4-215ENST00000562638 POLQO75417 2590 aa2.02□□□□□ -2.09
TCF4-215ENST00000562638 TENM1Q9UKZ4 2725 aa2.01□□□□□ -2.09
TCF4-215ENST00000562638 MYO18BQ8IUG5 2567 aa2.01□□□□□ -2.09
TCF4-215ENST00000562638 HSPG2P98160 4391 aa2.01□□□□□ -2.09
TCF4-215ENST00000562638 PLECQ15149 4684 aaKnown RBP2□□□□□ -2.09
TCF4-215ENST00000562638 FAT2Q9NYQ8 4349 aa2□□□□□ -2.09
TCF4-215ENST00000562638 FLNCQ14315 2725 aa2□□□□□ -2.09
TCF4-215ENST00000562638 DYNC1H1Q14204 4646 aaKnown RBP1.99□□□□□ -2.09
TCF4-215ENST00000562638 FLNAP21333 2647 aaKnown RBP1.99□□□□□ -2.09
TCF4-215ENST00000562638 STARD9Q9P2P6 4700 aa1.98□□□□□ -2.09
TCF4-215ENST00000562638 LRP1BQ9NZR2 4599 aa1.97□□□□□ -2.09
TCF4-215ENST00000562638 PKHD1P08F94 4074 aa1.96□□□□□ -2.1
TCF4-215ENST00000562638 MAST4O15021 2626 aa1.96□□□□□ -2.1
TCF4-215ENST00000562638 KRTAP9-6A8MVA2 160 aa1.94□□□□□ -2.1
TCF4-215ENST00000562638 KRTAP10-1P60331 282 aa1.94□□□□□ -2.1
TCF4-215ENST00000562638 KRTAP10-5P60370 271 aa1.94□□□□□ -2.1
TCF4-215ENST00000562638 KRTAP10-12P60413 245 aa1.94□□□□□ -2.1
TCF4-215ENST00000562638 NSD1Q96L73 2696 aaPredicted RBP1.94□□□□□ -2.1
TCF4-215ENST00000562638 MGAM2Q2M2H8 2515 aa1.93□□□□□ -2.1
TCF4-215ENST00000562638 FLNBO75369 2602 aaKnown RBP1.91□□□□□ -2.1
TCF4-215ENST00000562638 IGSF10Q6WRI0 2623 aa1.91□□□□□ -2.1
TCF4-215ENST00000562638 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.11
TCF4-215ENST00000562638 STAB1Q9NY15 2570 aa1.89□□□□□ -2.11
TCF4-215ENST00000562638 KRTAP2-3P0C7H8 128 aa1.88□□□□□ -2.11
TCF4-215ENST00000562638 MT3P25713 68 aa1.88□□□□□ -2.11
TCF4-215ENST00000562638 KRTAP2-4Q9BYR9 128 aa1.88□□□□□ -2.11
TCF4-215ENST00000562638 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
TCF4-215ENST00000562638 OBSCNQ5VST9 7968 aa1.87□□□□□ -2.11
TCF4-215ENST00000562638 LPAP08519 4548 aa1.85□□□□□ -2.11
TCF4-215ENST00000562638 FAT1Q14517 4588 aa1.84□□□□□ -2.11
TCF4-215ENST00000562638 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
TCF4-215ENST00000562638 LCE3AQ5TA76 89 aa1.84□□□□□ -2.11
TCF4-215ENST00000562638 HERC1Q15751 4861 aa1.8□□□□□ -2.12
TCF4-215ENST00000562638 KRTAP10-4P60372 401 aaPredicted RBP1.79□□□□□ -2.12
TCF4-215ENST00000562638 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
TCF4-215ENST00000562638 MUC17Q685J3 4493 aa1.77□□□□□ -2.13
TCF4-215ENST00000562638 LCE1FQ5T754 118 aa1.75□□□□□ -2.13
TCF4-215ENST00000562638 SMR3BP02814 79 aaPredicted RBP1.74□□□□□ -2.13
TCF4-215ENST00000562638 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
TCF4-215ENST00000562638 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
TCF4-215ENST00000562638 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
TCF4-215ENST00000562638 M0R2T5 61 aa1.7□□□□□ -2.14
TCF4-215ENST00000562638 LCE3CQ5T5A8 94 aa1.69□□□□□ -2.14
TCF4-215ENST00000562638 KRTAP19-2Q3LHN2 52 aa1.67□□□□□ -2.14
TCF4-215ENST00000562638 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
TCF4-215ENST00000562638 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.15
TCF4-215ENST00000562638 DNHD1Q96M86 4753 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms