RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
BBS4-204ENST00000562084 HERC2O95714 4834 aa9.97□□□□□ -0.81
BBS4-204ENST00000562084 Q5VSD8 79 aa9.95□□□□□ -0.82
BBS4-204ENST00000562084 KRTAP10-4P60372 401 aaPredicted RBP9.93□□□□□ -0.82
BBS4-204ENST00000562084 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
BBS4-204ENST00000562084 KRTAP4-5Q9BYR2 181 aa9.89□□□□□ -0.83
BBS4-204ENST00000562084 C9orf92A6NGG3 77 aa9.87□□□□□ -0.83
BBS4-204ENST00000562084 PKHD1L1Q86WI1 4243 aa9.85□□□□□ -0.83
BBS4-204ENST00000562084 RPL37P61927 97 aaKnown RBP9.79□□□□□ -0.84
BBS4-204ENST00000562084 ABCA13Q86UQ4 5058 aa9.79□□□□□ -0.84
BBS4-204ENST00000562084 FLG2Q5D862 2391 aaPredicted RBP9.74□□□□□ -0.85
BBS4-204ENST00000562084 CRIPTQ9P021 101 aa9.69□□□□□ -0.86
BBS4-204ENST00000562084 KRTAP10-6P60371 365 aaPredicted RBP9.68□□□□□ -0.86
BBS4-204ENST00000562084 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
BBS4-204ENST00000562084 MYCBP2O75592 4640 aa9.66□□□□□ -0.86
BBS4-204ENST00000562084 LRP1Q07954 4544 aaKnown RBP9.65□□□□□ -0.86
BBS4-204ENST00000562084 P0C880 135 aa9.65□□□□□ -0.86
BBS4-204ENST00000562084 FAT3Q8TDW7 4589 aa9.65□□□□□ -0.87
BBS4-204ENST00000562084 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
BBS4-204ENST00000562084 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
BBS4-204ENST00000562084 KRTAP13-4Q3LI77 160 aa9.56□□□□□ -0.88
BBS4-204ENST00000562084 TPRXLQ17RH7 258 aa9.55□□□□□ -0.88
BBS4-204ENST00000562084 SPINT4Q6UDR6 99 aa9.55□□□□□ -0.88
BBS4-204ENST00000562084 TNXBP22105 4242 aa9.53□□□□□ -0.88
BBS4-204ENST00000562084 S4R3F8 94 aa9.53□□□□□ -0.88
BBS4-204ENST00000562084 A0A0D9SG42 100 aa9.51□□□□□ -0.89
BBS4-204ENST00000562084 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
BBS4-204ENST00000562084 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
BBS4-204ENST00000562084 J3QL48 77 aa9.45□□□□□ -0.9
BBS4-204ENST00000562084 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
BBS4-204ENST00000562084 KRTAP15-1Q3LI76 137 aa9.4□□□□□ -0.91
BBS4-204ENST00000562084 C10orf95Q9H7T3 257 aa9.34□□□□□ -0.91
BBS4-204ENST00000562084 KRTAP12-2P59991 146 aa9.32□□□□□ -0.92
BBS4-204ENST00000562084 HERC1Q15751 4861 aa9.3□□□□□ -0.92
BBS4-204ENST00000562084 KRTAP12-1P59990 96 aa9.28□□□□□ -0.92
BBS4-204ENST00000562084 XP32Q5T750 250 aa9.28□□□□□ -0.92
BBS4-204ENST00000562084 M0QZ58 72 aa9.27□□□□□ -0.93
BBS4-204ENST00000562084 NDUFAF8A1L188 74 aa9.23□□□□□ -0.93
BBS4-204ENST00000562084 HMCN2Q8NDA2 5059 aa9.08□□□□□ -0.96
BBS4-204ENST00000562084 LPAP08519 4548 aa8.97□□□□□ -0.97
BBS4-204ENST00000562084 LRP2P98164 4655 aa8.91□□□□□ -0.98
BBS4-204ENST00000562084 R4GN34 69 aa8.84□□□□□ -0.99
BBS4-204ENST00000562084 PLAC4Q8WY50 150 aa8.81□□□□□ -1
BBS4-204ENST00000562084 UBR4Q5T4S7 5183 aa8.74□□□□□ -1.01
BBS4-204ENST00000562084 PP632Q6XCG6 107 aa8.72□□□□□ -1.01
BBS4-204ENST00000562084 MUC17Q685J3 4493 aa8.66□□□□□ -1.02
BBS4-204ENST00000562084 RNF213Q63HN8 5207 aa8.62□□□□□ -1.03
BBS4-204ENST00000562084 SEC61BP60468 96 aaKnown RBP8.61□□□□□ -1.03
BBS4-204ENST00000562084 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
BBS4-204ENST00000562084 KRTAP4-1Q9BYQ7 146 aa8.51□□□□□ -1.05
BBS4-204ENST00000562084 MUC2Q02817 5179 aa8.51□□□□□ -1.05
BBS4-204ENST00000562084 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
BBS4-204ENST00000562084 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
BBS4-204ENST00000562084 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
BBS4-204ENST00000562084 KRTAP23-1A1A580 65 aa8.39□□□□□ -1.07
BBS4-204ENST00000562084 TNP1P09430 55 aa8.24□□□□□ -1.09
BBS4-204ENST00000562084 FAT4Q6V0I7 4981 aa8.24□□□□□ -1.09
BBS4-204ENST00000562084 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
BBS4-204ENST00000562084 SPRR5A0A1B0GTR4 108 aa8.21□□□□□ -1.09
BBS4-204ENST00000562084 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
BBS4-204ENST00000562084 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
BBS4-204ENST00000562084 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
BBS4-204ENST00000562084 MT1HP80294 61 aa8.04□□□□□ -1.12
BBS4-204ENST00000562084 M0R2T5 61 aa7.91□□□□□ -1.14
BBS4-204ENST00000562084 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
BBS4-204ENST00000562084 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
BBS4-204ENST00000562084 KRTAP9-8Q9BYQ0 159 aa7.68□□□□□ -1.18
BBS4-204ENST00000562084 INE1O15225 51 aa7.65□□□□□ -1.18
BBS4-204ENST00000562084 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
BBS4-204ENST00000562084 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
BBS4-204ENST00000562084 MT2AP02795 61 aa7.62□□□□□ -1.19
BBS4-204ENST00000562084 KRTAP8-1Q8IUC2 63 aa7.57□□□□□ -1.2
BBS4-204ENST00000562084 MT1FP04733 61 aa7.56□□□□□ -1.2
BBS4-204ENST00000562084 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
BBS4-204ENST00000562084 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
BBS4-204ENST00000562084 KRTAP9-3Q9BYQ3 159 aa7.43□□□□□ -1.22
BBS4-204ENST00000562084 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
BBS4-204ENST00000562084 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
BBS4-204ENST00000562084 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
BBS4-204ENST00000562084 LCE2BO14633 110 aa7.3□□□□□ -1.24
BBS4-204ENST00000562084 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
BBS4-204ENST00000562084 USH2AO75445 5202 aa7.25□□□□□ -1.25
BBS4-204ENST00000562084 KRTAP10-5P60370 271 aa7.25□□□□□ -1.25
BBS4-204ENST00000562084 MT1XP80297 61 aa7.22□□□□□ -1.25
BBS4-204ENST00000562084 FSIP2Q5CZC0 6907 aa7.18□□□□□ -1.26
BBS4-204ENST00000562084 MT1BP07438 61 aa7.17□□□□□ -1.26
BBS4-204ENST00000562084 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
BBS4-204ENST00000562084 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.28
BBS4-204ENST00000562084 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
BBS4-204ENST00000562084 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
BBS4-204ENST00000562084 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
BBS4-204ENST00000562084 LCE3CQ5T5A8 94 aa6.92□□□□□ -1.3
BBS4-204ENST00000562084 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
BBS4-204ENST00000562084 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
BBS4-204ENST00000562084 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
BBS4-204ENST00000562084 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
BBS4-204ENST00000562084 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
BBS4-204ENST00000562084 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
BBS4-204ENST00000562084 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
BBS4-204ENST00000562084 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms