RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 LRP1BQ9NZR2 4599 aa5.26□□□□□ -1.57
TCF4-211ENST00000561992 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
TCF4-211ENST00000561992 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
TCF4-211ENST00000561992 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.58
TCF4-211ENST00000561992 PKD1P98161 4303 aa5.21□□□□□ -1.58
TCF4-211ENST00000561992 RYR1P21817 5038 aa5.19□□□□□ -1.58
TCF4-211ENST00000561992 HERC2O95714 4834 aa5.19□□□□□ -1.58
TCF4-211ENST00000561992 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
TCF4-211ENST00000561992 VPS13BQ7Z7G8 4022 aa5.15□□□□□ -1.59
TCF4-211ENST00000561992 FAT2Q9NYQ8 4349 aa5.14□□□□□ -1.59
TCF4-211ENST00000561992 P0C880 135 aa5.14□□□□□ -1.59
TCF4-211ENST00000561992 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
TCF4-211ENST00000561992 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
TCF4-211ENST00000561992 KRTAP10-4P60372 401 aaPredicted RBP5.09□□□□□ -1.59
TCF4-211ENST00000561992 S4R3F8 94 aa5.07□□□□□ -1.6
TCF4-211ENST00000561992 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
TCF4-211ENST00000561992 KIAA1109Q2LD37 5005 aa5.06□□□□□ -1.6
TCF4-211ENST00000561992 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
TCF4-211ENST00000561992 TPRXLQ17RH7 258 aa5.04□□□□□ -1.6
TCF4-211ENST00000561992 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
TCF4-211ENST00000561992 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
TCF4-211ENST00000561992 APOBP04114 4563 aaKnown RBP5.02□□□□□ -1.61
TCF4-211ENST00000561992 A0A0D9SG42 100 aa5.01□□□□□ -1.61
TCF4-211ENST00000561992 PKHD1P08F94 4074 aa5.01□□□□□ -1.61
TCF4-211ENST00000561992 A0A1B0GVY2 172 aa5.01□□□□□ -1.61
TCF4-211ENST00000561992 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
TCF4-211ENST00000561992 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
TCF4-211ENST00000561992 M0QZ58 72 aa4.96□□□□□ -1.62
TCF4-211ENST00000561992 KRTAP10-8P60410 259 aa4.96□□□□□ -1.62
TCF4-211ENST00000561992 XP32Q5T750 250 aa4.94□□□□□ -1.62
TCF4-211ENST00000561992 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
TCF4-211ENST00000561992 KRTAP4-5Q9BYR2 181 aa4.94□□□□□ -1.62
TCF4-211ENST00000561992 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
TCF4-211ENST00000561992 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
TCF4-211ENST00000561992 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
TCF4-211ENST00000561992 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
TCF4-211ENST00000561992 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
TCF4-211ENST00000561992 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
TCF4-211ENST00000561992 HERC1Q15751 4861 aa4.87□□□□□ -1.63
TCF4-211ENST00000561992 TNXBP22105 4242 aa4.86□□□□□ -1.63
TCF4-211ENST00000561992 HSPG2P98160 4391 aa4.84□□□□□ -1.63
TCF4-211ENST00000561992 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
TCF4-211ENST00000561992 FAT1Q14517 4588 aa4.84□□□□□ -1.63
TCF4-211ENST00000561992 DMBT1Q9UGM3 2413 aaPredicted RBP4.84□□□□□ -1.64
TCF4-211ENST00000561992 Q5VSD8 79 aa4.77□□□□□ -1.65
TCF4-211ENST00000561992 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
TCF4-211ENST00000561992 R4GN34 69 aa4.7□□□□□ -1.66
TCF4-211ENST00000561992 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
TCF4-211ENST00000561992 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
TCF4-211ENST00000561992 PLAC4Q8WY50 150 aa4.67□□□□□ -1.66
TCF4-211ENST00000561992 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
TCF4-211ENST00000561992 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
TCF4-211ENST00000561992 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
TCF4-211ENST00000561992 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
TCF4-211ENST00000561992 LRP2P98164 4655 aa4.43□□□□□ -1.7
TCF4-211ENST00000561992 LPAP08519 4548 aa4.42□□□□□ -1.7
TCF4-211ENST00000561992 TNP1P09430 55 aa4.39□□□□□ -1.71
TCF4-211ENST00000561992 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
TCF4-211ENST00000561992 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
TCF4-211ENST00000561992 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
TCF4-211ENST00000561992 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.71
TCF4-211ENST00000561992 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
TCF4-211ENST00000561992 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
TCF4-211ENST00000561992 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
TCF4-211ENST00000561992 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
TCF4-211ENST00000561992 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
TCF4-211ENST00000561992 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
TCF4-211ENST00000561992 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.74
TCF4-211ENST00000561992 MUC2Q02817 5179 aa4.14□□□□□ -1.75
TCF4-211ENST00000561992 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
TCF4-211ENST00000561992 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
TCF4-211ENST00000561992 INE1O15225 51 aa4.09□□□□□ -1.75
TCF4-211ENST00000561992 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.76
TCF4-211ENST00000561992 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
TCF4-211ENST00000561992 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
TCF4-211ENST00000561992 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
TCF4-211ENST00000561992 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
TCF4-211ENST00000561992 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
TCF4-211ENST00000561992 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
TCF4-211ENST00000561992 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
TCF4-211ENST00000561992 M0R2T5 61 aa3.9□□□□□ -1.78
TCF4-211ENST00000561992 MT2AP02795 61 aa3.89□□□□□ -1.79
TCF4-211ENST00000561992 MT1HP80294 61 aa3.89□□□□□ -1.79
TCF4-211ENST00000561992 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
TCF4-211ENST00000561992 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
TCF4-211ENST00000561992 MT1FP04733 61 aa3.87□□□□□ -1.79
TCF4-211ENST00000561992 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
TCF4-211ENST00000561992 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
TCF4-211ENST00000561992 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
TCF4-211ENST00000561992 MT1XP80297 61 aa3.84□□□□□ -1.79
TCF4-211ENST00000561992 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
TCF4-211ENST00000561992 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
TCF4-211ENST00000561992 MT1BP07438 61 aa3.82□□□□□ -1.8
TCF4-211ENST00000561992 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
TCF4-211ENST00000561992 LCE1FQ5T754 118 aa3.78□□□□□ -1.81
TCF4-211ENST00000561992 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
TCF4-211ENST00000561992 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
TCF4-211ENST00000561992 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
TCF4-211ENST00000561992 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
TCF4-211ENST00000561992 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms