RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ETDCA0A1B0GVM5 59 aa-1.63□□□□□ -2.67
USP8-218ENST00000561330 M0QY20 66 aa-1.63□□□□□ -2.67
USP8-218ENST00000561330 NHSQ6T4R5 1651 aa-1.64□□□□□ -2.67
USP8-218ENST00000561330 ENHOQ6UWT2 76 aa-1.64□□□□□ -2.67
USP8-218ENST00000561330 PEG3Q9GZU2 1588 aa-1.64□□□□□ -2.67
USP8-218ENST00000561330 WDFY3Q8IZQ1 3526 aa-1.65□□□□□ -2.67
USP8-218ENST00000561330 TTC37Q6PGP7 1564 aa-1.66□□□□□ -2.68
USP8-218ENST00000561330 M0QZ58 72 aa-1.66□□□□□ -2.68
USP8-218ENST00000561330 SPART-AS1P0CW21 52 aa-1.67□□□□□ -2.68
USP8-218ENST00000561330 TDRG1Q3Y452 100 aa-1.67□□□□□ -2.68
USP8-218ENST00000561330 DEFB121Q5J5C9 76 aa-1.67□□□□□ -2.68
USP8-218ENST00000561330 DMDP11532 3685 aa-1.68□□□□□ -2.68
USP8-218ENST00000561330 ERVK-7P63135 1459 aa-1.68□□□□□ -2.68
USP8-218ENST00000561330 CFAP54Q96N23 3096 aa-1.68□□□□□ -2.68
USP8-218ENST00000561330 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.69□□□□□ -2.68
USP8-218ENST00000561330 H3BUT2 72 aa-1.69□□□□□ -2.68
USP8-218ENST00000561330 ADIRFQ15847 76 aa-1.69□□□□□ -2.68
USP8-218ENST00000561330 UACAQ9BZF9 1416 aa-1.69□□□□□ -2.68
USP8-218ENST00000561330 SPEGQ15772 3267 aa-1.7□□□□□ -2.68
USP8-218ENST00000561330 DNMBPQ6XZF7 1577 aa-1.7□□□□□ -2.68
USP8-218ENST00000561330 ST20Q9HBF5 79 aa-1.7□□□□□ -2.68
USP8-218ENST00000561330 MED14O60244 1454 aa-1.7□□□□□ -2.68
USP8-218ENST00000561330 LMTK2Q8IWU2 1503 aa-1.71□□□□□ -2.68
USP8-218ENST00000561330 A8MTW9 85 aa-1.71□□□□□ -2.68
USP8-218ENST00000561330 H3BVH4 76 aa-1.71□□□□□ -2.68
USP8-218ENST00000561330 CD163L1Q9NR16 1453 aa-1.71□□□□□ -2.68
USP8-218ENST00000561330 MROH1Q8NDA8 1641 aa-1.72□□□□□ -2.68
USP8-218ENST00000561330 RPS29P62273 56 aaKnown RBP-1.72□□□□□ -2.68
USP8-218ENST00000561330 ABCC6O95255 1503 aa-1.72□□□□□ -2.69
USP8-218ENST00000561330 ASXL1Q8IXJ9 1541 aa-1.73□□□□□ -2.69
USP8-218ENST00000561330 KIF21BO75037 1637 aa-1.73□□□□□ -2.69
USP8-218ENST00000561330 CROCC2H7BZ55 1655 aa-1.74□□□□□ -2.69
USP8-218ENST00000561330 ABRACLQ9P1F3 81 aa-1.74□□□□□ -2.69
USP8-218ENST00000561330 C3P01024 1663 aa-1.74□□□□□ -2.69
USP8-218ENST00000561330 PCNTO95613 3336 aa-1.75□□□□□ -2.69
USP8-218ENST00000561330 DEFB136Q30KP8 78 aa-1.75□□□□□ -2.69
USP8-218ENST00000561330 S100A13Q99584 98 aa-1.75□□□□□ -2.69
USP8-218ENST00000561330 DEFB114Q30KQ6 69 aa-1.76□□□□□ -2.69
USP8-218ENST00000561330 ABCC1P33527 1531 aa-1.76□□□□□ -2.69
USP8-218ENST00000561330 SZT2Q5T011 3432 aa-1.77□□□□□ -2.69
USP8-218ENST00000561330 LEAP2Q969E1 77 aa-1.77□□□□□ -2.69
USP8-218ENST00000561330 CLASP1Q7Z460 1538 aa-1.77□□□□□ -2.69
USP8-218ENST00000561330 FAM208AQ9UK61 1670 aaKnown RBP-1.77□□□□□ -2.69
USP8-218ENST00000561330 KAAG1Q9UBP8 84 aa-1.78□□□□□ -2.69
USP8-218ENST00000561330 DCAF1Q9Y4B6 1507 aa-1.78□□□□□ -2.69
USP8-218ENST00000561330 DIP2AQ14689 1571 aa-1.78□□□□□ -2.69
USP8-218ENST00000561330 PREX2Q70Z35 1606 aa-1.8□□□□□ -2.7
USP8-218ENST00000561330 RRBP1Q9P2E9 1410 aaKnown RBP-1.8□□□□□ -2.7
USP8-218ENST00000561330 CEP350Q5VT06 3117 aa-1.8□□□□□ -2.7
USP8-218ENST00000561330 ANKARQ7Z5J8 1434 aa-1.81□□□□□ -2.7
USP8-218ENST00000561330 FRYLO94915 3013 aa-1.81□□□□□ -2.7
USP8-218ENST00000561330 MADDQ8WXG6 1647 aa-1.81□□□□□ -2.7
USP8-218ENST00000561330 ATXN8Q156A1 80 aa-1.82□□□□□ -2.7
USP8-218ENST00000561330 C18orf32Q8TCD1 76 aa-1.82□□□□□ -2.7
USP8-218ENST00000561330 CFAP74Q9C0B2 1584 aa-1.82□□□□□ -2.7
USP8-218ENST00000561330 EP400Q96L91 3159 aa-1.84□□□□□ -2.7
USP8-218ENST00000561330 MUC3AQ02505 3323 aa-1.84□□□□□ -2.7
USP8-218ENST00000561330 CENPEQ02224 2701 aa-1.84□□□□□ -2.7
USP8-218ENST00000561330 GLI2P10070 1586 aa-1.85□□□□□ -2.7
USP8-218ENST00000561330 TIAM1Q13009 1591 aa-1.85□□□□□ -2.7
USP8-218ENST00000561330 SMIM27A0A1W2PRY6 76 aa-1.86□□□□□ -2.71
USP8-218ENST00000561330 GNG13Q9P2W3 67 aa-1.86□□□□□ -2.71
USP8-218ENST00000561330 WDFY4Q6ZS81 3184 aa-1.86□□□□□ -2.71
USP8-218ENST00000561330 WFDC10BQ8IUB3 73 aa-1.89□□□□□ -2.71
USP8-218ENST00000561330 HILPDAQ9Y5L2 63 aa-1.89□□□□□ -2.71
USP8-218ENST00000561330 DCHS1Q96JQ0 3298 aa-1.89□□□□□ -2.71
USP8-218ENST00000561330 K7EMI3 77 aa-1.9□□□□□ -2.71
USP8-218ENST00000561330 ALS2Q96Q42 1657 aa-1.9□□□□□ -2.71
USP8-218ENST00000561330 LINC00308Q8TCZ7 52 aa-1.91□□□□□ -2.72
USP8-218ENST00000561330 TMEM167BQ9NRX6 74 aa-1.91□□□□□ -2.72
USP8-218ENST00000561330 ABCA8O94911 1581 aa-1.92□□□□□ -2.72
USP8-218ENST00000561330 GNG2P59768 71 aa-1.92□□□□□ -2.72
USP8-218ENST00000561330 DNAH14Q0VDD8 3507 aa-1.92□□□□□ -2.72
USP8-218ENST00000561330 CCDC18Q5T9S5 1454 aa-1.93□□□□□ -2.72
USP8-218ENST00000561330 M0R1W7 72 aa-1.93□□□□□ -2.72
USP8-218ENST00000561330 EEA1Q15075 1411 aa-1.94□□□□□ -2.72
USP8-218ENST00000561330 ABCA9Q8IUA7 1624 aa-1.95□□□□□ -2.72
USP8-218ENST00000561330 LINC01549A6NIU2 74 aa-1.96□□□□□ -2.72
USP8-218ENST00000561330 POLR2KP53803 58 aaKnown RBP-1.96□□□□□ -2.72
USP8-218ENST00000561330 MKI67P46013 3256 aaKnown RBP-1.96□□□□□ -2.72
USP8-218ENST00000561330 NMES1Q9C002 83 aa-1.97□□□□□ -2.72
USP8-218ENST00000561330 SERF2P84101 59 aa-1.98□□□□□ -2.73
USP8-218ENST00000561330 EFCAB6Q5THR3 1501 aa-1.98□□□□□ -2.73
USP8-218ENST00000561330 RB1CC1Q8TDY2 1594 aa-1.98□□□□□ -2.73
USP8-218ENST00000561330 LMO7Q8WWI1 1683 aa-1.99□□□□□ -2.73
USP8-218ENST00000561330 DNAH12Q6ZR08 3092 aa-1.99□□□□□ -2.73
USP8-218ENST00000561330 IQGAP3Q86VI3 1631 aa-1.99□□□□□ -2.73
USP8-218ENST00000561330 CFAP47Q6ZTR5 3102 aa-2□□□□□ -2.73
USP8-218ENST00000561330 USP34Q70CQ2 3546 aa-2.01□□□□□ -2.73
USP8-218ENST00000561330 KRTAP19-2Q3LHN2 52 aa-2.02□□□□□ -2.73
USP8-218ENST00000561330 CCDC180Q9P1Z9 1646 aa-2.02□□□□□ -2.73
USP8-218ENST00000561330 MROH2AA6NES4 1674 aa-2.04□□□□□ -2.74
USP8-218ENST00000561330 DEFB131AP59861 70 aa-2.04□□□□□ -2.74
USP8-218ENST00000561330 UNC80Q8N2C7 3258 aa-2.04□□□□□ -2.74
USP8-218ENST00000561330 XIRP2A4UGR9 3374 aa-2.05□□□□□ -2.74
USP8-218ENST00000561330 ABCA6Q8N139 1617 aa-2.05□□□□□ -2.74
USP8-218ENST00000561330 DUOX2Q9NRD8 1548 aa-2.05□□□□□ -2.74
USP8-218ENST00000561330 UGGT2Q9NYU1 1516 aa-2.05□□□□□ -2.74
USP8-218ENST00000561330 NRXN3Q9Y4C0 1643 aa-2.07□□□□□ -2.74
USP8-218ENST00000561330 CEP250Q9BV73 2442 aa-2.07□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms