RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 IMUPQ9GZP8 106 aa9.17□□□□□ -0.94
TSPAN3-210ENST00000561277 KRTAP19-1Q8IUB9 90 aa9.15□□□□□ -0.95
TSPAN3-210ENST00000561277 A8MUN3 132 aa9.13□□□□□ -0.95
TSPAN3-210ENST00000561277 H3BPC8 53 aa9.13□□□□□ -0.95
TSPAN3-210ENST00000561277 NDUFC1O43677 76 aa9.08□□□□□ -0.96
TSPAN3-210ENST00000561277 FCGBPQ9Y6R7 5405 aaPredicted RBP9.07□□□□□ -0.96
TSPAN3-210ENST00000561277 SMIM20Q8N5G0 67 aa9□□□□□ -0.97
TSPAN3-210ENST00000561277 TRAV7A0A075B6U4 112 aa8.99□□□□□ -0.97
TSPAN3-210ENST00000561277 KRTAP19-6Q3LI70 58 aa8.99□□□□□ -0.97
TSPAN3-210ENST00000561277 DMAC1Q96GE9 116 aa8.96□□□□□ -0.97
TSPAN3-210ENST00000561277 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
TSPAN3-210ENST00000561277 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.95□□□□□ -0.98
TSPAN3-210ENST00000561277 H0YAA0 97 aa8.91□□□□□ -0.98
TSPAN3-210ENST00000561277 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
TSPAN3-210ENST00000561277 MACF1Q9UPN3 7388 aaKnown RBP8.88□□□□□ -0.99
TSPAN3-210ENST00000561277 Q5VV11 94 aa8.88□□□□□ -0.99
TSPAN3-210ENST00000561277 CRIPTQ9P021 101 aa8.87□□□□□ -0.99
TSPAN3-210ENST00000561277 MT1BP07438 61 aa8.86□□□□□ -0.99
TSPAN3-210ENST00000561277 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
TSPAN3-210ENST00000561277 SNURFQ9Y675 71 aa8.84□□□□□ -0.99
TSPAN3-210ENST00000561277 ACYP2P14621 99 aa8.78□□□□□ -1
TSPAN3-210ENST00000561277 KRTAP9-7A8MTY7 169 aa8.78□□□□□ -1
TSPAN3-210ENST00000561277 SERP2Q8N6R1 65 aa8.78□□□□□ -1
TSPAN3-210ENST00000561277 C20orf197Q8N268 126 aa8.77□□□□□ -1.01
TSPAN3-210ENST00000561277 SYNE2Q8WXH0 6885 aaKnown RBP8.73□□□□□ -1.01
TSPAN3-210ENST00000561277 A6NN06 94 aa8.71□□□□□ -1.02
TSPAN3-210ENST00000561277 P0C880 135 aa8.71□□□□□ -1.02
TSPAN3-210ENST00000561277 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
TSPAN3-210ENST00000561277 R4GN34 69 aa8.65□□□□□ -1.03
TSPAN3-210ENST00000561277 SPANXA2-OT1Q8N9U9 137 aa8.64□□□□□ -1.03
TSPAN3-210ENST00000561277 SPTSSBQ8NFR3 76 aa8.64□□□□□ -1.03
TSPAN3-210ENST00000561277 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
TSPAN3-210ENST00000561277 KRTAP10-5P60370 271 aa8.61□□□□□ -1.03
TSPAN3-210ENST00000561277 M0QZ58 72 aa8.6□□□□□ -1.03
TSPAN3-210ENST00000561277 COX7CP15954 63 aa8.56□□□□□ -1.04
TSPAN3-210ENST00000561277 LINC01554Q52M75 96 aa8.48□□□□□ -1.05
TSPAN3-210ENST00000561277 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
TSPAN3-210ENST00000561277 COA5Q86WW8 74 aa8.43□□□□□ -1.06
TSPAN3-210ENST00000561277 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
TSPAN3-210ENST00000561277 KRTAP6-3Q3LI67 103 aa8.4□□□□□ -1.06
TSPAN3-210ENST00000561277 H7BZZ5 65 aa8.39□□□□□ -1.07
TSPAN3-210ENST00000561277 ANAPC13Q9BS18 74 aa8.39□□□□□ -1.07
TSPAN3-210ENST00000561277 PRO2289Q9P1D8 64 aa8.38□□□□□ -1.07
TSPAN3-210ENST00000561277 MT1XP80297 61 aa8.36□□□□□ -1.07
TSPAN3-210ENST00000561277 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
TSPAN3-210ENST00000561277 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
TSPAN3-210ENST00000561277 SEC61GP60059 68 aa8.2□□□□□ -1.1
TSPAN3-210ENST00000561277 SERP1Q9Y6X1 66 aa8.18□□□□□ -1.1
TSPAN3-210ENST00000561277 KMT2DO14686 5537 aa8.17□□□□□ -1.1
TSPAN3-210ENST00000561277 MUC12Q9UKN1 5478 aa8.15□□□□□ -1.1
TSPAN3-210ENST00000561277 NEBP20929 6669 aa8.13□□□□□ -1.11
TSPAN3-210ENST00000561277 KRTAP5-9P26371 169 aa8.1□□□□□ -1.11
TSPAN3-210ENST00000561277 KRTAP12-2P59991 146 aa8.09□□□□□ -1.11
TSPAN3-210ENST00000561277 A0A1B0GU33 70 aa8.03□□□□□ -1.12
TSPAN3-210ENST00000561277 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
TSPAN3-210ENST00000561277 A0A0D9SG42 100 aa8.02□□□□□ -1.13
TSPAN3-210ENST00000561277 ATP5EP56381 51 aaPredicted RBP8.01□□□□□ -1.13
TSPAN3-210ENST00000561277 KRTAP10-7P60409 375 aaPredicted RBP8.01□□□□□ -1.13
TSPAN3-210ENST00000561277 A0A1B0GU69 56 aa8□□□□□ -1.13
TSPAN3-210ENST00000561277 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
TSPAN3-210ENST00000561277 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
TSPAN3-210ENST00000561277 MDN1Q9NU22 5596 aa7.97□□□□□ -1.13
TSPAN3-210ENST00000561277 SPRR2FQ96RM1 72 aa7.97□□□□□ -1.13
TSPAN3-210ENST00000561277 KRTAP4-8A0A0G2JLE6 195 aa7.96□□□□□ -1.14
TSPAN3-210ENST00000561277 KRTAP4-8Q9BYQ9 185 aa7.96□□□□□ -1.14
TSPAN3-210ENST00000561277 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
TSPAN3-210ENST00000561277 TMEM258P61165 79 aa7.89□□□□□ -1.15
TSPAN3-210ENST00000561277 SPINT4Q6UDR6 99 aa7.89□□□□□ -1.15
TSPAN3-210ENST00000561277 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
TSPAN3-210ENST00000561277 SPRR2EP22531 72 aa7.8□□□□□ -1.16
TSPAN3-210ENST00000561277 SPRR2BP35325 72 aa7.8□□□□□ -1.16
TSPAN3-210ENST00000561277 SPRR2AP35326 72 aa7.8□□□□□ -1.16
TSPAN3-210ENST00000561277 PRR15LQ9BU68 103 aa7.8□□□□□ -1.16
TSPAN3-210ENST00000561277 SMIM26A0A096LP01 95 aa7.8□□□□□ -1.16
TSPAN3-210ENST00000561277 A8MU10 97 aa7.78□□□□□ -1.16
TSPAN3-210ENST00000561277 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
TSPAN3-210ENST00000561277 KRTAP20-1Q3LI63 56 aa7.71□□□□□ -1.17
TSPAN3-210ENST00000561277 LCE1AQ5T7P2 110 aa7.7□□□□□ -1.18
TSPAN3-210ENST00000561277 PCP4P48539 62 aa7.64□□□□□ -1.19
TSPAN3-210ENST00000561277 UQCR11O14957 56 aa7.54□□□□□ -1.2
TSPAN3-210ENST00000561277 KRTAP2-3P0C7H8 128 aa7.54□□□□□ -1.2
TSPAN3-210ENST00000561277 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
TSPAN3-210ENST00000561277 KRTAP2-4Q9BYR9 128 aa7.54□□□□□ -1.2
TSPAN3-210ENST00000561277 SPRR2DP22532 72 aa7.54□□□□□ -1.2
TSPAN3-210ENST00000561277 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
TSPAN3-210ENST00000561277 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
TSPAN3-210ENST00000561277 V9GYY9 64 aa7.42□□□□□ -1.22
TSPAN3-210ENST00000561277 PSPHP1O15172 72 aa7.41□□□□□ -1.22
TSPAN3-210ENST00000561277 MIR22HGQ0VDD5 57 aa7.41□□□□□ -1.22
TSPAN3-210ENST00000561277 MT1EP04732 61 aa7.4□□□□□ -1.22
TSPAN3-210ENST00000561277 TNP1P09430 55 aa7.39□□□□□ -1.23
TSPAN3-210ENST00000561277 Q1T7F1 81 aa7.37□□□□□ -1.23
TSPAN3-210ENST00000561277 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
TSPAN3-210ENST00000561277 KRTAP2-2Q9BYT5 123 aa7.32□□□□□ -1.24
TSPAN3-210ENST00000561277 KRTAP2-1Q9BYU5 128 aa7.32□□□□□ -1.24
TSPAN3-210ENST00000561277 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
TSPAN3-210ENST00000561277 LCE3BQ5TA77 95 aa7.3□□□□□ -1.24
TSPAN3-210ENST00000561277 KRTAP19-3Q7Z4W3 81 aa7.29□□□□□ -1.24
TSPAN3-210ENST00000561277 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
TSPAN3-210ENST00000561277 K7ERS5 55 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms