RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 MT2AP02795 61 aa5.39□□□□□ -1.55
TPM1-227ENST00000560970 FAM236DA0A1B0GTK5 79 aa5.38□□□□□ -1.55
TPM1-227ENST00000560970 FAM236CP0DP71 79 aa5.38□□□□□ -1.55
TPM1-227ENST00000560970 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
TPM1-227ENST00000560970 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
TPM1-227ENST00000560970 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
TPM1-227ENST00000560970 LINC00208Q96KT6 92 aa5.36□□□□□ -1.55
TPM1-227ENST00000560970 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
TPM1-227ENST00000560970 MT1FP04733 61 aa5.35□□□□□ -1.55
TPM1-227ENST00000560970 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
TPM1-227ENST00000560970 KRTAP19-1Q8IUB9 90 aa5.34□□□□□ -1.55
TPM1-227ENST00000560970 LOC101927531A0A1B0GV80 90 aa5.33□□□□□ -1.56
TPM1-227ENST00000560970 SPINK7P58062 85 aa5.33□□□□□ -1.56
TPM1-227ENST00000560970 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
TPM1-227ENST00000560970 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
TPM1-227ENST00000560970 Q5W150 140 aa5.31□□□□□ -1.56
TPM1-227ENST00000560970 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
TPM1-227ENST00000560970 SPANXA2-OT1Q8N9U9 137 aa5.29□□□□□ -1.56
TPM1-227ENST00000560970 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
TPM1-227ENST00000560970 RPS28P62857 69 aaKnown RBP5.27□□□□□ -1.57
TPM1-227ENST00000560970 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
TPM1-227ENST00000560970 IGKV2-30P06310 120 aa5.26□□□□□ -1.57
TPM1-227ENST00000560970 CYP4F30PQ9H0H9 118 aa5.26□□□□□ -1.57
TPM1-227ENST00000560970 SERP1Q9Y6X1 66 aa5.25□□□□□ -1.57
TPM1-227ENST00000560970 IGKV2D-30A0A075B6S6 120 aa5.23□□□□□ -1.57
TPM1-227ENST00000560970 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
TPM1-227ENST00000560970 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
TPM1-227ENST00000560970 C4orf26Q17RF5 130 aa5.13□□□□□ -1.59
TPM1-227ENST00000560970 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
TPM1-227ENST00000560970 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
TPM1-227ENST00000560970 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
TPM1-227ENST00000560970 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
TPM1-227ENST00000560970 COA5Q86WW8 74 aa5.1□□□□□ -1.59
TPM1-227ENST00000560970 A8MUN3 132 aa5.09□□□□□ -1.59
TPM1-227ENST00000560970 ACYP2P14621 99 aa5.09□□□□□ -1.59
TPM1-227ENST00000560970 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
TPM1-227ENST00000560970 CHKB-CPT1BH3BT56 60 aa5.02□□□□□ -1.61
TPM1-227ENST00000560970 V9GYY9 64 aa5.02□□□□□ -1.61
TPM1-227ENST00000560970 NEBP20929 6669 aa5.02□□□□□ -1.61
TPM1-227ENST00000560970 Q1T7F1 81 aa5□□□□□ -1.61
TPM1-227ENST00000560970 S4R3F8 94 aa5□□□□□ -1.61
TPM1-227ENST00000560970 LCA10Q71F78 164 aa4.98□□□□□ -1.61
TPM1-227ENST00000560970 SPTSSBQ8NFR3 76 aa4.95□□□□□ -1.62
TPM1-227ENST00000560970 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
TPM1-227ENST00000560970 A6NN06 94 aa4.89□□□□□ -1.63
TPM1-227ENST00000560970 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
TPM1-227ENST00000560970 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
TPM1-227ENST00000560970 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
TPM1-227ENST00000560970 PSPHP1O15172 72 aa4.86□□□□□ -1.63
TPM1-227ENST00000560970 MT1BP07438 61 aa4.85□□□□□ -1.63
TPM1-227ENST00000560970 Q5VV11 94 aa4.85□□□□□ -1.63
TPM1-227ENST00000560970 A0A1B0GU69 56 aa4.83□□□□□ -1.64
TPM1-227ENST00000560970 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
TPM1-227ENST00000560970 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
TPM1-227ENST00000560970 SEC61GP60059 68 aa4.8□□□□□ -1.64
TPM1-227ENST00000560970 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
TPM1-227ENST00000560970 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
TPM1-227ENST00000560970 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
TPM1-227ENST00000560970 A6NED7 52 aa4.74□□□□□ -1.65
TPM1-227ENST00000560970 H0YAA0 97 aa4.74□□□□□ -1.65
TPM1-227ENST00000560970 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
TPM1-227ENST00000560970 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
TPM1-227ENST00000560970 ADM2Q7Z4H4 148 aa4.71□□□□□ -1.66
TPM1-227ENST00000560970 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
TPM1-227ENST00000560970 UQCR11O14957 56 aa4.7□□□□□ -1.66
TPM1-227ENST00000560970 KMT2DO14686 5537 aa4.7□□□□□ -1.66
TPM1-227ENST00000560970 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
TPM1-227ENST00000560970 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
TPM1-227ENST00000560970 CRIPTQ9P021 101 aa4.68□□□□□ -1.66
TPM1-227ENST00000560970 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
TPM1-227ENST00000560970 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
TPM1-227ENST00000560970 A0A1B0GU33 70 aa4.66□□□□□ -1.66
TPM1-227ENST00000560970 P0C880 135 aa4.66□□□□□ -1.66
TPM1-227ENST00000560970 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
TPM1-227ENST00000560970 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
TPM1-227ENST00000560970 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
TPM1-227ENST00000560970 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
TPM1-227ENST00000560970 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
TPM1-227ENST00000560970 A8MU10 97 aa4.57□□□□□ -1.68
TPM1-227ENST00000560970 SPRR2EP22531 72 aa4.57□□□□□ -1.68
TPM1-227ENST00000560970 SPRR2BP35325 72 aa4.57□□□□□ -1.68
TPM1-227ENST00000560970 SPRR2AP35326 72 aa4.57□□□□□ -1.68
TPM1-227ENST00000560970 R4GN34 69 aa4.55□□□□□ -1.68
TPM1-227ENST00000560970 M0QZ58 72 aa4.54□□□□□ -1.68
TPM1-227ENST00000560970 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
TPM1-227ENST00000560970 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
TPM1-227ENST00000560970 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
TPM1-227ENST00000560970 MT1XP80297 61 aa4.49□□□□□ -1.69
TPM1-227ENST00000560970 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
TPM1-227ENST00000560970 LINC01554Q52M75 96 aa4.47□□□□□ -1.69
TPM1-227ENST00000560970 K7ERS5 55 aa4.46□□□□□ -1.7
TPM1-227ENST00000560970 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
TPM1-227ENST00000560970 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
TPM1-227ENST00000560970 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
TPM1-227ENST00000560970 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
TPM1-227ENST00000560970 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
TPM1-227ENST00000560970 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
TPM1-227ENST00000560970 A0A0D9SG42 100 aa4.42□□□□□ -1.7
TPM1-227ENST00000560970 SPRR2DP22532 72 aa4.42□□□□□ -1.7
TPM1-227ENST00000560970 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms