RNA–Protein interactions for RNA: ENST00000560471.5

SHF-206, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-206ENST00000560471 LINC01554Q52M75 96 aa13.5□□□□□ -0.25
SHF-206ENST00000560471 CSAG1Q6PB30 78 aa13.47□□□□□ -0.25
SHF-206ENST00000560471 RPL37P61927 97 aaKnown RBP13.47□□□□□ -0.25
SHF-206ENST00000560471 DMBT1Q9UGM3 2413 aaPredicted RBP13.45□□□□□ -0.26
SHF-206ENST00000560471 XP32Q5T750 250 aa13.42□□□□□ -0.26
SHF-206ENST00000560471 KRTAP17-1Q9BYP8 105 aa13.39□□□□□ -0.27
SHF-206ENST00000560471 KRTAP3-3Q9BYR6 98 aa13.38□□□□□ -0.27
SHF-206ENST00000560471 MYCBP2O75592 4640 aa13.38□□□□□ -0.27
SHF-206ENST00000560471 RYR1P21817 5038 aa13.35□□□□□ -0.27
SHF-206ENST00000560471 KIAA1109Q2LD37 5005 aa13.32□□□□□ -0.28
SHF-206ENST00000560471 KRTAP10-6P60371 365 aaPredicted RBP13.27□□□□□ -0.29
SHF-206ENST00000560471 S4R3F8 94 aa13.22□□□□□ -0.29
SHF-206ENST00000560471 MT1HL1P0DM35 61 aa13.2□□□□□ -0.3
SHF-206ENST00000560471 KRTAP3-2Q9BYR7 98 aa13.18□□□□□ -0.3
SHF-206ENST00000560471 EPPK1P58107 5090 aaKnown RBP13.18□□□□□ -0.3
SHF-206ENST00000560471 KRTAP13-4Q3LI77 160 aa13.16□□□□□ -0.3
SHF-206ENST00000560471 K7ERS5 55 aa13.15□□□□□ -0.3
SHF-206ENST00000560471 KRTAP25-1Q3LHN0 102 aa13.08□□□□□ -0.32
SHF-206ENST00000560471 A0A0D9SG42 100 aa13.05□□□□□ -0.32
SHF-206ENST00000560471 P0C880 135 aa13.03□□□□□ -0.32
SHF-206ENST00000560471 CRIPTQ9P021 101 aa13□□□□□ -0.33
SHF-206ENST00000560471 LPAP08519 4548 aa13□□□□□ -0.33
SHF-206ENST00000560471 LRP2P98164 4655 aa12.93□□□□□ -0.34
SHF-206ENST00000560471 ROMO1P60602 79 aa12.9□□□□□ -0.34
SHF-206ENST00000560471 TPRXLQ17RH7 258 aa12.86□□□□□ -0.35
SHF-206ENST00000560471 ABCA13Q86UQ4 5058 aa12.81□□□□□ -0.36
SHF-206ENST00000560471 KRTAP12-2P59991 146 aa12.72□□□□□ -0.37
SHF-206ENST00000560471 KRTAP4-5Q9BYR2 181 aa12.71□□□□□ -0.37
SHF-206ENST00000560471 KRTAP12-1P59990 96 aa12.62□□□□□ -0.39
SHF-206ENST00000560471 SPINT4Q6UDR6 99 aa12.6□□□□□ -0.39
SHF-206ENST00000560471 C10orf95Q9H7T3 257 aa12.53□□□□□ -0.4
SHF-206ENST00000560471 M0QZ58 72 aa12.52□□□□□ -0.41
SHF-206ENST00000560471 HERC2O95714 4834 aa12.37□□□□□ -0.43
SHF-206ENST00000560471 SEC61BP60468 96 aaKnown RBP12.36□□□□□ -0.43
SHF-206ENST00000560471 MUC17Q685J3 4493 aa12.36□□□□□ -0.43
SHF-206ENST00000560471 KRTAP4-1Q9BYQ7 146 aa12.33□□□□□ -0.44
SHF-206ENST00000560471 R4GN34 69 aa12.27□□□□□ -0.45
SHF-206ENST00000560471 LORP23490 312 aaPredicted RBP12.21□□□□□ -0.45
SHF-206ENST00000560471 J3QL48 77 aa12.19□□□□□ -0.46
SHF-206ENST00000560471 MUC2Q02817 5179 aa12.11□□□□□ -0.47
SHF-206ENST00000560471 KRTAP19-2Q3LHN2 52 aa12.09□□□□□ -0.47
SHF-206ENST00000560471 A0A0A0MQY5 61 aa12.03□□□□□ -0.48
SHF-206ENST00000560471 BIRC6Q9NR09 4857 aa11.99□□□□□ -0.49
SHF-206ENST00000560471 HERC1Q15751 4861 aa11.99□□□□□ -0.49
SHF-206ENST00000560471 KRTAP15-1Q3LI76 137 aa11.94□□□□□ -0.5
SHF-206ENST00000560471 PCLOQ9Y6V0 5065 aa11.91□□□□□ -0.5
SHF-206ENST00000560471 NDUFAF8A1L188 74 aa11.81□□□□□ -0.52
SHF-206ENST00000560471 FLGP20930 4061 aaPredicted RBP11.7□□□□□ -0.54
SHF-206ENST00000560471 CAMK2N1Q7Z7J9 78 aa11.65□□□□□ -0.54
SHF-206ENST00000560471 HMCN2Q8NDA2 5059 aa11.58□□□□□ -0.56
SHF-206ENST00000560471 FAT4Q6V0I7 4981 aa11.5□□□□□ -0.57
SHF-206ENST00000560471 PLAC4Q8WY50 150 aa11.43□□□□□ -0.58
SHF-206ENST00000560471 RNF213Q63HN8 5207 aa11.41□□□□□ -0.58
SHF-206ENST00000560471 PP632Q6XCG6 107 aa11.36□□□□□ -0.59
SHF-206ENST00000560471 LCE2CQ5TA81 110 aa11.36□□□□□ -0.59
SHF-206ENST00000560471 UBR4Q5T4S7 5183 aa11.29□□□□□ -0.6
SHF-206ENST00000560471 LUZP6Q538Z0 58 aa11.25□□□□□ -0.61
SHF-206ENST00000560471 TNP1P09430 55 aa11.18□□□□□ -0.62
SHF-206ENST00000560471 SPRR2GQ9BYE4 73 aa11.11□□□□□ -0.63
SHF-206ENST00000560471 KRTAP19-1Q8IUB9 90 aa11.1□□□□□ -0.63
SHF-206ENST00000560471 M0R2T5 61 aa11.08□□□□□ -0.64
SHF-206ENST00000560471 MT1HP80294 61 aa11.03□□□□□ -0.64
SHF-206ENST00000560471 KRTAP23-1A1A580 65 aa10.98□□□□□ -0.65
SHF-206ENST00000560471 MT1FP04733 61 aa10.9□□□□□ -0.67
SHF-206ENST00000560471 MT2AP02795 61 aa10.88□□□□□ -0.67
SHF-206ENST00000560471 KRTAP10-10P60014 251 aa10.85□□□□□ -0.67
SHF-206ENST00000560471 KRTAP9-8Q9BYQ0 159 aa10.79□□□□□ -0.68
SHF-206ENST00000560471 LCE3AQ5TA76 89 aa10.66□□□□□ -0.7
SHF-206ENST00000560471 SPRR5A0A1B0GTR4 108 aa10.65□□□□□ -0.7
SHF-206ENST00000560471 KRTAP19-8Q3LI54 63 aa10.62□□□□□ -0.71
SHF-206ENST00000560471 MT1BP07438 61 aa10.52□□□□□ -0.72
SHF-206ENST00000560471 KRTAP10-5P60370 271 aa10.47□□□□□ -0.73
SHF-206ENST00000560471 MT1XP80297 61 aa10.45□□□□□ -0.74
SHF-206ENST00000560471 KRTAP8-1Q8IUC2 63 aa10.35□□□□□ -0.75
SHF-206ENST00000560471 KRTAP9-3Q9BYQ3 159 aa10.33□□□□□ -0.76
SHF-206ENST00000560471 KRTAP10-12P60413 245 aa10.22□□□□□ -0.77
SHF-206ENST00000560471 KRTAP10-7P60409 375 aaPredicted RBP10.18□□□□□ -0.78
SHF-206ENST00000560471 KRTAP12-3P60328 96 aa10.13□□□□□ -0.79
SHF-206ENST00000560471 USH2AO75445 5202 aa10.06□□□□□ -0.8
SHF-206ENST00000560471 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
SHF-206ENST00000560471 LCE2BO14633 110 aa9.95□□□□□ -0.82
SHF-206ENST00000560471 KRTAP19-5Q3LI72 72 aa9.74□□□□□ -0.85
SHF-206ENST00000560471 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.85
SHF-206ENST00000560471 KMT2DO14686 5537 aa9.71□□□□□ -0.86
SHF-206ENST00000560471 KRTAP4-8A0A0G2JLE6 195 aa9.57□□□□□ -0.88
SHF-206ENST00000560471 KRTAP4-8Q9BYQ9 185 aa9.57□□□□□ -0.88
SHF-206ENST00000560471 LCE3CQ5T5A8 94 aa9.54□□□□□ -0.88
SHF-206ENST00000560471 FSIP2Q5CZC0 6907 aa9.52□□□□□ -0.89
SHF-206ENST00000560471 INE1O15225 51 aa9.42□□□□□ -0.9
SHF-206ENST00000560471 KRTAP19-7Q3SYF9 63 aa9.31□□□□□ -0.92
SHF-206ENST00000560471 KRTAP9-6A8MVA2 160 aa9.25□□□□□ -0.93
SHF-206ENST00000560471 SSPOA2VEC9 5147 aa9.21□□□□□ -0.93
SHF-206ENST00000560471 KRTAP4-7Q9BYR0 210 aa9.18□□□□□ -0.94
SHF-206ENST00000560471 MT1EP04732 61 aa9.03□□□□□ -0.96
SHF-206ENST00000560471 MT1LQ93083 61 aa9.03□□□□□ -0.96
SHF-206ENST00000560471 KRTAP19-4Q3LI73 84 aa8.88□□□□□ -0.99
SHF-206ENST00000560471 KRTAP19-6Q3LI70 58 aa8.87□□□□□ -0.99
SHF-206ENST00000560471 KRTAP2-3P0C7H8 128 aa8.86□□□□□ -0.99
SHF-206ENST00000560471 KRTAP2-4Q9BYR9 128 aa8.86□□□□□ -0.99
SHF-206ENST00000560471 KRTAP2-1Q9BYU5 128 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms