RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SNHG12Q9BXW3 62 aa2.73□□□□□ -1.97
HERC1-208ENST00000560462 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
HERC1-208ENST00000560462 SS18L2Q9UHA2 77 aa2.73□□□□□ -1.97
HERC1-208ENST00000560462 A0A087WSZ3 146 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 A8MUN3 132 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 SPATA45Q537H7 98 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 C2orf91Q6ZV80 131 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 TEN1Q86WV5 123 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 C1orf64Q8NEQ6 169 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 C14orf144Q96I85 54 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 VPS25Q9BRG1 176 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 HIGD1BQ9P298 99 aa2.71□□□□□ -1.98
HERC1-208ENST00000560462 H0YGX0 51 aa2.7□□□□□ -1.98
HERC1-208ENST00000560462 SNCGO76070 127 aa2.7□□□□□ -1.98
HERC1-208ENST00000560462 VAMP8Q9BV40 100 aa2.7□□□□□ -1.98
HERC1-208ENST00000560462 A0A1B0GX51 115 aa2.69□□□□□ -1.98
HERC1-208ENST00000560462 A0A1W2PNM2 257 aa2.69□□□□□ -1.98
HERC1-208ENST00000560462 R4GN34 69 aa2.69□□□□□ -1.98
HERC1-208ENST00000560462 H3BMG7 143 aa2.68□□□□□ -1.98
HERC1-208ENST00000560462 FABP2P12104 132 aa2.68□□□□□ -1.98
HERC1-208ENST00000560462 FXYD2P54710 66 aa2.68□□□□□ -1.98
HERC1-208ENST00000560462 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
HERC1-208ENST00000560462 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
HERC1-208ENST00000560462 ANKRD29Q8N6D5 301 aa2.68□□□□□ -1.98
HERC1-208ENST00000560462 PRO1854Q9UHT4 67 aa2.68□□□□□ -1.98
HERC1-208ENST00000560462 DNAL4O96015 105 aa2.67□□□□□ -1.98
HERC1-208ENST00000560462 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
HERC1-208ENST00000560462 FAM236AA0A1B0GUQ0 79 aa2.66□□□□□ -1.98
HERC1-208ENST00000560462 FAM236BA0A1B0GV22 79 aa2.66□□□□□ -1.98
HERC1-208ENST00000560462 ORMDL1Q9P0S3 153 aa2.66□□□□□ -1.98
HERC1-208ENST00000560462 K7ERJ3 54 aa2.65□□□□□ -1.99
HERC1-208ENST00000560462 IGKV4-1P06312 121 aa2.65□□□□□ -1.99
HERC1-208ENST00000560462 HSD52Q0P140 79 aa2.65□□□□□ -1.99
HERC1-208ENST00000560462 TRBV7-4A0A0J9YYF1 115 aa2.64□□□□□ -1.99
HERC1-208ENST00000560462 TRACP01848 142 aa2.64□□□□□ -1.99
HERC1-208ENST00000560462 CCKP06307 115 aa2.64□□□□□ -1.99
HERC1-208ENST00000560462 H3BPC8 53 aa2.63□□□□□ -1.99
HERC1-208ENST00000560462 TMEM256-PLSCR3K7ERE1 68 aa2.63□□□□□ -1.99
HERC1-208ENST00000560462 PYY3Q5JQD4 70 aa2.63□□□□□ -1.99
HERC1-208ENST00000560462 LINC00472Q9H8W2 130 aa2.63□□□□□ -1.99
HERC1-208ENST00000560462 K7ERU9 68 aa2.62□□□□□ -1.99
HERC1-208ENST00000560462 COX6CP09669 75 aa2.62□□□□□ -1.99
HERC1-208ENST00000560462 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
HERC1-208ENST00000560462 J3KT08 172 aa2.61□□□□□ -1.99
HERC1-208ENST00000560462 HIST1H4AP62805 103 aaKnown RBP2.6□□□□□ -1.99
HERC1-208ENST00000560462 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
HERC1-208ENST00000560462 UQCR10Q9UDW1 63 aa2.6□□□□□ -1.99
HERC1-208ENST00000560462 MT1XP80297 61 aa2.59□□□□□ -1.99
HERC1-208ENST00000560462 DSCR8Q96T75 97 aa2.59□□□□□ -1.99
HERC1-208ENST00000560462 RPS28P62857 69 aaKnown RBP2.58□□□□□ -2
HERC1-208ENST00000560462 C9JAW5 83 aa2.57□□□□□ -2
HERC1-208ENST00000560462 BAALC-AS2P0C853 105 aa2.56□□□□□ -2
HERC1-208ENST00000560462 Q6ZQT0 140 aa2.56□□□□□ -2
HERC1-208ENST00000560462 NDUFB1O75438 58 aa2.55□□□□□ -2
HERC1-208ENST00000560462 SPINK7P58062 85 aa2.55□□□□□ -2
HERC1-208ENST00000560462 WFDC13Q8IUB5 93 aa2.55□□□□□ -2
HERC1-208ENST00000560462 NAA38Q9BRA0 125 aaKnown RBP2.55□□□□□ -2
HERC1-208ENST00000560462 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
HERC1-208ENST00000560462 JMJD7-PLA2G4BH0Y9G9 81 aa2.54□□□□□ -2
HERC1-208ENST00000560462 M0R143 59 aa2.54□□□□□ -2
HERC1-208ENST00000560462 ATXN8Q156A1 80 aa2.54□□□□□ -2
HERC1-208ENST00000560462 IGKV3D-7A0A0C4DH55 119 aa2.53□□□□□ -2
HERC1-208ENST00000560462 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
HERC1-208ENST00000560462 H1FX-AS1Q4G0G2 97 aa2.53□□□□□ -2
HERC1-208ENST00000560462 LYRM7Q5U5X0 104 aa2.53□□□□□ -2
HERC1-208ENST00000560462 C14orf132Q9NPU4 83 aa2.53□□□□□ -2
HERC1-208ENST00000560462 MMP24-AS1A0A0U1RRL7 71 aa2.52□□□□□ -2.01
HERC1-208ENST00000560462 CYSTM1Q9H1C7 97 aa2.52□□□□□ -2.01
HERC1-208ENST00000560462 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
HERC1-208ENST00000560462 PDE6GP18545 87 aa2.51□□□□□ -2.01
HERC1-208ENST00000560462 PRR15Q8IV56 129 aa2.51□□□□□ -2.01
HERC1-208ENST00000560462 TMEM254Q8TBM7 123 aa2.51□□□□□ -2.01
HERC1-208ENST00000560462 PRO0461Q9UI25 63 aa2.51□□□□□ -2.01
HERC1-208ENST00000560462 TRAV7A0A075B6U4 112 aa2.5□□□□□ -2.01
HERC1-208ENST00000560462 K7EQZ3 153 aa2.5□□□□□ -2.01
HERC1-208ENST00000560462 NREPQ16612 68 aa2.5□□□□□ -2.01
HERC1-208ENST00000560462 LCA10Q71F78 164 aa2.5□□□□□ -2.01
HERC1-208ENST00000560462 MRPL34Q9BQ48 92 aaKnown RBP2.5□□□□□ -2.01
HERC1-208ENST00000560462 H3BT86 120 aa2.49□□□□□ -2.01
HERC1-208ENST00000560462 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
HERC1-208ENST00000560462 hDV103S1A0JD37 113 aa2.48□□□□□ -2.01
HERC1-208ENST00000560462 KLKP1Q107X0 134 aa2.48□□□□□ -2.01
HERC1-208ENST00000560462 COL5A1-AS1Q5SY13 56 aa2.48□□□□□ -2.01
HERC1-208ENST00000560462 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
HERC1-208ENST00000560462 J3QR89 54 aa2.47□□□□□ -2.01
HERC1-208ENST00000560462 LINC01554Q52M75 96 aa2.47□□□□□ -2.01
HERC1-208ENST00000560462 C7orf65Q6ZTY9 151 aa2.47□□□□□ -2.01
HERC1-208ENST00000560462 P0C880 135 aa2.46□□□□□ -2.02
HERC1-208ENST00000560462 A0A1W2PPM0 123 aa2.45□□□□□ -2.02
HERC1-208ENST00000560462 HCG22E2RYF7 251 aa2.44□□□□□ -2.02
HERC1-208ENST00000560462 TAX1BP3O14907 124 aa2.44□□□□□ -2.02
HERC1-208ENST00000560462 CASC2Q6XLA1 102 aa2.44□□□□□ -2.02
HERC1-208ENST00000560462 GTF2H5Q6ZYL4 71 aa2.44□□□□□ -2.02
HERC1-208ENST00000560462 CCDC179H3BU77 68 aa2.42□□□□□ -2.02
HERC1-208ENST00000560462 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
HERC1-208ENST00000560462 BRK1Q8WUW1 75 aa2.41□□□□□ -2.02
HERC1-208ENST00000560462 CRIPTQ9P021 101 aa2.41□□□□□ -2.02
HERC1-208ENST00000560462 SPCS1Q9Y6A9 102 aa2.41□□□□□ -2.02
HERC1-208ENST00000560462 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
HERC1-208ENST00000560462 H0YAA0 97 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms