RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 RPL37P61927 97 aaKnown RBP10.33□□□□□ -0.76
SEMA4B-215ENST00000560089 APOBP04114 4563 aaKnown RBP10.3□□□□□ -0.76
SEMA4B-215ENST00000560089 LUZP6Q538Z0 58 aa10.29□□□□□ -0.76
SEMA4B-215ENST00000560089 KRTAP3-1Q9BYR8 98 aa10.24□□□□□ -0.77
SEMA4B-215ENST00000560089 KRTAP13-2Q52LG2 175 aa10.21□□□□□ -0.78
SEMA4B-215ENST00000560089 A0A0D9SG42 100 aa10.2□□□□□ -0.78
SEMA4B-215ENST00000560089 EPPK1P58107 5090 aaKnown RBP10.16□□□□□ -0.78
SEMA4B-215ENST00000560089 DMBT1Q9UGM3 2413 aaPredicted RBP10.11□□□□□ -0.79
SEMA4B-215ENST00000560089 KIAA1109Q2LD37 5005 aa10.08□□□□□ -0.8
SEMA4B-215ENST00000560089 KRTAP13-4Q3LI77 160 aa10.08□□□□□ -0.8
SEMA4B-215ENST00000560089 HSPG2P98160 4391 aa10.07□□□□□ -0.8
SEMA4B-215ENST00000560089 KRTAP1-4P0C5Y4 121 aa10.05□□□□□ -0.8
SEMA4B-215ENST00000560089 KRTAP10-4P60372 401 aaPredicted RBP10□□□□□ -0.81
SEMA4B-215ENST00000560089 RYR1P21817 5038 aa9.99□□□□□ -0.81
SEMA4B-215ENST00000560089 KRTAP10-6P60371 365 aaPredicted RBP9.99□□□□□ -0.81
SEMA4B-215ENST00000560089 KRTAP17-1Q9BYP8 105 aa9.98□□□□□ -0.81
SEMA4B-215ENST00000560089 S4R3F8 94 aa9.96□□□□□ -0.82
SEMA4B-215ENST00000560089 LRP1Q07954 4544 aaKnown RBP9.95□□□□□ -0.82
SEMA4B-215ENST00000560089 Q5VSD8 79 aa9.9□□□□□ -0.82
SEMA4B-215ENST00000560089 PKHD1L1Q86WI1 4243 aa9.88□□□□□ -0.83
SEMA4B-215ENST00000560089 KRTAP12-2P59991 146 aa9.86□□□□□ -0.83
SEMA4B-215ENST00000560089 MYCBP2O75592 4640 aa9.85□□□□□ -0.83
SEMA4B-215ENST00000560089 C9orf92A6NGG3 77 aa9.84□□□□□ -0.83
SEMA4B-215ENST00000560089 XP32Q5T750 250 aa9.82□□□□□ -0.84
SEMA4B-215ENST00000560089 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
SEMA4B-215ENST00000560089 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
SEMA4B-215ENST00000560089 SEC61BP60468 96 aaKnown RBP9.71□□□□□ -0.86
SEMA4B-215ENST00000560089 TNXBP22105 4242 aa9.7□□□□□ -0.86
SEMA4B-215ENST00000560089 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
SEMA4B-215ENST00000560089 KRTAP4-5Q9BYR2 181 aa9.69□□□□□ -0.86
SEMA4B-215ENST00000560089 KRTAP12-1P59990 96 aa9.69□□□□□ -0.86
SEMA4B-215ENST00000560089 PLAC4Q8WY50 150 aa9.67□□□□□ -0.86
SEMA4B-215ENST00000560089 RPS29P62273 56 aaKnown RBP9.6□□□□□ -0.87
SEMA4B-215ENST00000560089 ABCA13Q86UQ4 5058 aa9.58□□□□□ -0.88
SEMA4B-215ENST00000560089 KRTAP10-8P60410 259 aa9.56□□□□□ -0.88
SEMA4B-215ENST00000560089 BIRC6Q9NR09 4857 aa9.53□□□□□ -0.88
SEMA4B-215ENST00000560089 MT1HL1P0DM35 61 aa9.5□□□□□ -0.89
SEMA4B-215ENST00000560089 HERC2O95714 4834 aa9.47□□□□□ -0.89
SEMA4B-215ENST00000560089 M0QZ58 72 aa9.31□□□□□ -0.92
SEMA4B-215ENST00000560089 PCLOQ9Y6V0 5065 aa9.3□□□□□ -0.92
SEMA4B-215ENST00000560089 LPAP08519 4548 aa9.3□□□□□ -0.92
SEMA4B-215ENST00000560089 J3QL48 77 aa9.24□□□□□ -0.93
SEMA4B-215ENST00000560089 LRP2P98164 4655 aa9.19□□□□□ -0.94
SEMA4B-215ENST00000560089 HERC1Q15751 4861 aa9.16□□□□□ -0.94
SEMA4B-215ENST00000560089 CAMK2N1Q7Z7J9 78 aa9.11□□□□□ -0.95
SEMA4B-215ENST00000560089 PP632Q6XCG6 107 aa9□□□□□ -0.97
SEMA4B-215ENST00000560089 R4GN34 69 aa8.94□□□□□ -0.98
SEMA4B-215ENST00000560089 PRO2289Q9P1D8 64 aa8.93□□□□□ -0.98
SEMA4B-215ENST00000560089 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
SEMA4B-215ENST00000560089 MUC2Q02817 5179 aa8.85□□□□□ -0.99
SEMA4B-215ENST00000560089 SPRR5A0A1B0GTR4 108 aa8.75□□□□□ -1.01
SEMA4B-215ENST00000560089 KRTAP4-1Q9BYQ7 146 aa8.71□□□□□ -1.02
SEMA4B-215ENST00000560089 MUC17Q685J3 4493 aa8.7□□□□□ -1.02
SEMA4B-215ENST00000560089 UBR4Q5T4S7 5183 aa8.64□□□□□ -1.03
SEMA4B-215ENST00000560089 RNF213Q63HN8 5207 aa8.62□□□□□ -1.03
SEMA4B-215ENST00000560089 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
SEMA4B-215ENST00000560089 INE1O15225 51 aa8.56□□□□□ -1.04
SEMA4B-215ENST00000560089 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
SEMA4B-215ENST00000560089 TNP1P09430 55 aa8.39□□□□□ -1.07
SEMA4B-215ENST00000560089 KRTAP23-1A1A580 65 aa8.37□□□□□ -1.07
SEMA4B-215ENST00000560089 KRTAP19-2Q3LHN2 52 aa8.35□□□□□ -1.07
SEMA4B-215ENST00000560089 FLGP20930 4061 aaPredicted RBP8.21□□□□□ -1.1
SEMA4B-215ENST00000560089 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
SEMA4B-215ENST00000560089 M0R2T5 61 aa8.03□□□□□ -1.12
SEMA4B-215ENST00000560089 MT1HP80294 61 aa8.01□□□□□ -1.13
SEMA4B-215ENST00000560089 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
SEMA4B-215ENST00000560089 KRTAP9-8Q9BYQ0 159 aa7.71□□□□□ -1.18
SEMA4B-215ENST00000560089 MT2AP02795 61 aa7.7□□□□□ -1.18
SEMA4B-215ENST00000560089 MT1FP04733 61 aa7.7□□□□□ -1.18
SEMA4B-215ENST00000560089 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
SEMA4B-215ENST00000560089 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
SEMA4B-215ENST00000560089 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
SEMA4B-215ENST00000560089 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
SEMA4B-215ENST00000560089 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
SEMA4B-215ENST00000560089 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
SEMA4B-215ENST00000560089 USH2AO75445 5202 aa7.41□□□□□ -1.22
SEMA4B-215ENST00000560089 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
SEMA4B-215ENST00000560089 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
SEMA4B-215ENST00000560089 FSIP2Q5CZC0 6907 aa7.28□□□□□ -1.24
SEMA4B-215ENST00000560089 LCE2BO14633 110 aa7.28□□□□□ -1.24
SEMA4B-215ENST00000560089 MT1BP07438 61 aa7.26□□□□□ -1.25
SEMA4B-215ENST00000560089 KRTAP19-8Q3LI54 63 aa7.23□□□□□ -1.25
SEMA4B-215ENST00000560089 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
SEMA4B-215ENST00000560089 MT1XP80297 61 aa7.05□□□□□ -1.28
SEMA4B-215ENST00000560089 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
SEMA4B-215ENST00000560089 SSPOA2VEC9 5147 aa7□□□□□ -1.29
SEMA4B-215ENST00000560089 KRTAP2-3P0C7H8 128 aa6.93□□□□□ -1.3
SEMA4B-215ENST00000560089 KRTAP2-4Q9BYR9 128 aa6.93□□□□□ -1.3
SEMA4B-215ENST00000560089 KRTAP2-1Q9BYU5 128 aa6.93□□□□□ -1.3
SEMA4B-215ENST00000560089 KMT2DO14686 5537 aa6.89□□□□□ -1.31
SEMA4B-215ENST00000560089 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
SEMA4B-215ENST00000560089 KRTAP9-6A8MVA2 160 aa6.86□□□□□ -1.31
SEMA4B-215ENST00000560089 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
SEMA4B-215ENST00000560089 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
SEMA4B-215ENST00000560089 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
SEMA4B-215ENST00000560089 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
SEMA4B-215ENST00000560089 KRTAP19-6Q3LI70 58 aa6.65□□□□□ -1.34
SEMA4B-215ENST00000560089 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
SEMA4B-215ENST00000560089 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
SEMA4B-215ENST00000560089 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms