RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 CDK2AP2O75956 126 aa4.12□□□□□ -1.75
ZEB1-216ENST00000559496 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
ZEB1-216ENST00000559496 PKHD1P08F94 4074 aa4.11□□□□□ -1.75
ZEB1-216ENST00000559496 IGLV8-61A0A075B6I0 122 aa4.1□□□□□ -1.75
ZEB1-216ENST00000559496 UQCR11O14957 56 aa4.1□□□□□ -1.75
ZEB1-216ENST00000559496 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
ZEB1-216ENST00000559496 ANAPC11Q9NYG5 84 aa4.1□□□□□ -1.75
ZEB1-216ENST00000559496 LRP1BQ9NZR2 4599 aa4.1□□□□□ -1.75
ZEB1-216ENST00000559496 IGLV9-49A0A0B4J1Y8 123 aa4.09□□□□□ -1.75
ZEB1-216ENST00000559496 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
ZEB1-216ENST00000559496 SPINK6Q6UWN8 80 aa4.09□□□□□ -1.75
ZEB1-216ENST00000559496 RYR3Q15413 4870 aa4.09□□□□□ -1.76
ZEB1-216ENST00000559496 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
ZEB1-216ENST00000559496 KRTAP10-4P60372 401 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-216ENST00000559496 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
ZEB1-216ENST00000559496 IGFL1Q6UW32 110 aa4.07□□□□□ -1.76
ZEB1-216ENST00000559496 A0A0G2JQZ4 141 aa4.06□□□□□ -1.76
ZEB1-216ENST00000559496 A0A1B0GU69 56 aa4.06□□□□□ -1.76
ZEB1-216ENST00000559496 ACYP2P14621 99 aa4.06□□□□□ -1.76
ZEB1-216ENST00000559496 PCOTHQ58A44 107 aa4.06□□□□□ -1.76
ZEB1-216ENST00000559496 Q5VSD8 79 aa4.06□□□□□ -1.76
ZEB1-216ENST00000559496 KRTAP1-4P0C5Y4 121 aa4.05□□□□□ -1.76
ZEB1-216ENST00000559496 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
ZEB1-216ENST00000559496 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
ZEB1-216ENST00000559496 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
ZEB1-216ENST00000559496 A0A087WSZ3 146 aa4.04□□□□□ -1.76
ZEB1-216ENST00000559496 MMP24-AS1A0A0U1RRL7 71 aa4.04□□□□□ -1.76
ZEB1-216ENST00000559496 APOBP04114 4563 aaKnown RBP4.03□□□□□ -1.76
ZEB1-216ENST00000559496 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
ZEB1-216ENST00000559496 KRTAP13-2Q52LG2 175 aa4.02□□□□□ -1.77
ZEB1-216ENST00000559496 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
ZEB1-216ENST00000559496 LINC00472Q9H8W2 130 aa4.02□□□□□ -1.77
ZEB1-216ENST00000559496 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
ZEB1-216ENST00000559496 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
ZEB1-216ENST00000559496 KRTAP16-1A8MUX0 517 aa4.01□□□□□ -1.77
ZEB1-216ENST00000559496 TYMSOSQ8TAI1 123 aa4.01□□□□□ -1.77
ZEB1-216ENST00000559496 P0C880 135 aa3.99□□□□□ -1.77
ZEB1-216ENST00000559496 DMAC1Q96GE9 116 aa3.99□□□□□ -1.77
ZEB1-216ENST00000559496 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
ZEB1-216ENST00000559496 HSPG2P98160 4391 aa3.97□□□□□ -1.77
ZEB1-216ENST00000559496 RYR1P21817 5038 aa3.96□□□□□ -1.78
ZEB1-216ENST00000559496 LINC00304Q8N9R0 145 aa3.96□□□□□ -1.78
ZEB1-216ENST00000559496 FAT1Q14517 4588 aa3.95□□□□□ -1.78
ZEB1-216ENST00000559496 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
ZEB1-216ENST00000559496 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
ZEB1-216ENST00000559496 A8MUU9 505 aa3.94□□□□□ -1.78
ZEB1-216ENST00000559496 SPINK1P00995 79 aa3.94□□□□□ -1.78
ZEB1-216ENST00000559496 KIAA1109Q2LD37 5005 aa3.93□□□□□ -1.78
ZEB1-216ENST00000559496 FLG2Q5D862 2391 aaPredicted RBP3.92□□□□□ -1.78
ZEB1-216ENST00000559496 KRTAP10-8P60410 259 aa3.92□□□□□ -1.78
ZEB1-216ENST00000559496 RPS29P62273 56 aaKnown RBP3.92□□□□□ -1.78
ZEB1-216ENST00000559496 Q96NJ1 140 aa3.92□□□□□ -1.78
ZEB1-216ENST00000559496 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
ZEB1-216ENST00000559496 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
ZEB1-216ENST00000559496 C20orf166-AS1Q96NR2 134 aa3.91□□□□□ -1.78
ZEB1-216ENST00000559496 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
ZEB1-216ENST00000559496 A0A1B0GVX0 72 aa3.89□□□□□ -1.79
ZEB1-216ENST00000559496 MT1HL1P0DM35 61 aa3.89□□□□□ -1.79
ZEB1-216ENST00000559496 Q5W150 140 aa3.88□□□□□ -1.79
ZEB1-216ENST00000559496 BIRC6Q9NR09 4857 aa3.88□□□□□ -1.79
ZEB1-216ENST00000559496 K7ERS5 55 aa3.87□□□□□ -1.79
ZEB1-216ENST00000559496 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
ZEB1-216ENST00000559496 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
ZEB1-216ENST00000559496 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
ZEB1-216ENST00000559496 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
ZEB1-216ENST00000559496 HERC2O95714 4834 aa3.8□□□□□ -1.8
ZEB1-216ENST00000559496 TNXBP22105 4242 aa3.8□□□□□ -1.8
ZEB1-216ENST00000559496 FAT3Q8TDW7 4589 aa3.8□□□□□ -1.8
ZEB1-216ENST00000559496 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
ZEB1-216ENST00000559496 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
ZEB1-216ENST00000559496 H0YAA0 97 aa3.76□□□□□ -1.81
ZEB1-216ENST00000559496 ABCA13Q86UQ4 5058 aa3.73□□□□□ -1.81
ZEB1-216ENST00000559496 A0A1B0GU33 70 aa3.73□□□□□ -1.81
ZEB1-216ENST00000559496 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.82
ZEB1-216ENST00000559496 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
ZEB1-216ENST00000559496 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
ZEB1-216ENST00000559496 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
ZEB1-216ENST00000559496 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
ZEB1-216ENST00000559496 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
ZEB1-216ENST00000559496 CRIPTQ9P021 101 aa3.65□□□□□ -1.82
ZEB1-216ENST00000559496 PCLOQ9Y6V0 5065 aa3.62□□□□□ -1.83
ZEB1-216ENST00000559496 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
ZEB1-216ENST00000559496 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
ZEB1-216ENST00000559496 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
ZEB1-216ENST00000559496 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
ZEB1-216ENST00000559496 LPAP08519 4548 aa3.54□□□□□ -1.84
ZEB1-216ENST00000559496 LRP2P98164 4655 aa3.51□□□□□ -1.85
ZEB1-216ENST00000559496 HERC1Q15751 4861 aa3.5□□□□□ -1.85
ZEB1-216ENST00000559496 KRTAP4-1Q9BYQ7 146 aa3.5□□□□□ -1.85
ZEB1-216ENST00000559496 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
ZEB1-216ENST00000559496 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
ZEB1-216ENST00000559496 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
ZEB1-216ENST00000559496 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
ZEB1-216ENST00000559496 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
ZEB1-216ENST00000559496 S4R3F8 94 aa3.41□□□□□ -1.86
ZEB1-216ENST00000559496 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
ZEB1-216ENST00000559496 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
ZEB1-216ENST00000559496 A0A0D9SG42 100 aa3.36□□□□□ -1.87
ZEB1-216ENST00000559496 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
ZEB1-216ENST00000559496 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms