RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
HERC1-202ENST00000558324 ATP5EP2Q5VTU8 51 aa5.39□□□□□ -1.55
HERC1-202ENST00000558324 ATOX1O00244 68 aa5.37□□□□□ -1.55
HERC1-202ENST00000558324 MT1BP07438 61 aa5.36□□□□□ -1.55
HERC1-202ENST00000558324 HIST1H4AP62805 103 aaKnown RBP5.36□□□□□ -1.55
HERC1-202ENST00000558324 Q5VV11 94 aa5.36□□□□□ -1.55
HERC1-202ENST00000558324 A0A087WVE0 104 aa5.35□□□□□ -1.55
HERC1-202ENST00000558324 LOC101927531A0A1B0GV80 90 aa5.35□□□□□ -1.55
HERC1-202ENST00000558324 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
HERC1-202ENST00000558324 KLKP1Q107X0 134 aa5.34□□□□□ -1.55
HERC1-202ENST00000558324 A6NN06 94 aa5.33□□□□□ -1.56
HERC1-202ENST00000558324 CCDC179H3BU77 68 aa5.33□□□□□ -1.56
HERC1-202ENST00000558324 UQCRQO14949 82 aa5.33□□□□□ -1.56
HERC1-202ENST00000558324 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
HERC1-202ENST00000558324 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
HERC1-202ENST00000558324 H0Y9P7 68 aa5.31□□□□□ -1.56
HERC1-202ENST00000558324 COX7CP15954 63 aa5.29□□□□□ -1.56
HERC1-202ENST00000558324 SERP2Q8N6R1 65 aa5.27□□□□□ -1.57
HERC1-202ENST00000558324 SMIM20Q8N5G0 67 aa5.25□□□□□ -1.57
HERC1-202ENST00000558324 NDUFC1O43677 76 aa5.24□□□□□ -1.57
HERC1-202ENST00000558324 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
HERC1-202ENST00000558324 NEBP20929 6669 aa5.22□□□□□ -1.57
HERC1-202ENST00000558324 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
HERC1-202ENST00000558324 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
HERC1-202ENST00000558324 TMEM258P61165 79 aa5.2□□□□□ -1.58
HERC1-202ENST00000558324 TRAV7A0A075B6U4 112 aa5.18□□□□□ -1.58
HERC1-202ENST00000558324 A8MUN3 132 aa5.18□□□□□ -1.58
HERC1-202ENST00000558324 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
HERC1-202ENST00000558324 H0YAA0 97 aa5.17□□□□□ -1.58
HERC1-202ENST00000558324 MP68P56378 58 aa5.17□□□□□ -1.58
HERC1-202ENST00000558324 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
HERC1-202ENST00000558324 MUC12Q9UKN1 5478 aa5.13□□□□□ -1.59
HERC1-202ENST00000558324 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
HERC1-202ENST00000558324 C20orf197Q8N268 126 aa5.12□□□□□ -1.59
HERC1-202ENST00000558324 ATP5EP56381 51 aaPredicted RBP5.08□□□□□ -1.6
HERC1-202ENST00000558324 CYSTM1Q9H1C7 97 aa5.06□□□□□ -1.6
HERC1-202ENST00000558324 H3BPC8 53 aa5.05□□□□□ -1.6
HERC1-202ENST00000558324 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
HERC1-202ENST00000558324 P0C880 135 aa5.04□□□□□ -1.6
HERC1-202ENST00000558324 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
HERC1-202ENST00000558324 R4GN34 69 aa5.04□□□□□ -1.6
HERC1-202ENST00000558324 H7BZZ5 65 aa5.03□□□□□ -1.6
HERC1-202ENST00000558324 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
HERC1-202ENST00000558324 SERP1Q9Y6X1 66 aa5.03□□□□□ -1.6
HERC1-202ENST00000558324 PRO2289Q9P1D8 64 aa5.02□□□□□ -1.61
HERC1-202ENST00000558324 SNURFQ9Y675 71 aa5.02□□□□□ -1.61
HERC1-202ENST00000558324 M0QZ58 72 aa5.01□□□□□ -1.61
HERC1-202ENST00000558324 MT1XP80297 61 aa5.01□□□□□ -1.61
HERC1-202ENST00000558324 SVIPQ8NHG7 77 aa5□□□□□ -1.61
HERC1-202ENST00000558324 KMT2DO14686 5537 aa5□□□□□ -1.61
HERC1-202ENST00000558324 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
HERC1-202ENST00000558324 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
HERC1-202ENST00000558324 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
HERC1-202ENST00000558324 SMIM26A0A096LP01 95 aa4.94□□□□□ -1.62
HERC1-202ENST00000558324 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
HERC1-202ENST00000558324 ACYP2P14621 99 aa4.9□□□□□ -1.63
HERC1-202ENST00000558324 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
HERC1-202ENST00000558324 SPRR2EP22531 72 aa4.88□□□□□ -1.63
HERC1-202ENST00000558324 SPRR2BP35325 72 aa4.88□□□□□ -1.63
HERC1-202ENST00000558324 SPRR2AP35326 72 aa4.88□□□□□ -1.63
HERC1-202ENST00000558324 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
HERC1-202ENST00000558324 SPTSSBQ8NFR3 76 aa4.86□□□□□ -1.63
HERC1-202ENST00000558324 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
HERC1-202ENST00000558324 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
HERC1-202ENST00000558324 SPANXA2-OT1Q8N9U9 137 aa4.83□□□□□ -1.64
HERC1-202ENST00000558324 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
HERC1-202ENST00000558324 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
HERC1-202ENST00000558324 KRTAP2-4Q9BYR9 128 aa4.81□□□□□ -1.64
HERC1-202ENST00000558324 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
HERC1-202ENST00000558324 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
HERC1-202ENST00000558324 V9GYY9 64 aa4.78□□□□□ -1.64
HERC1-202ENST00000558324 Q1T7F1 81 aa4.75□□□□□ -1.65
HERC1-202ENST00000558324 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
HERC1-202ENST00000558324 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
HERC1-202ENST00000558324 SPRR2DP22532 72 aa4.72□□□□□ -1.65
HERC1-202ENST00000558324 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
HERC1-202ENST00000558324 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
HERC1-202ENST00000558324 COA5Q86WW8 74 aa4.68□□□□□ -1.66
HERC1-202ENST00000558324 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
HERC1-202ENST00000558324 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
HERC1-202ENST00000558324 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
HERC1-202ENST00000558324 PSPHP1O15172 72 aa4.63□□□□□ -1.67
HERC1-202ENST00000558324 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
HERC1-202ENST00000558324 A0A0D9SG42 100 aa4.58□□□□□ -1.68
HERC1-202ENST00000558324 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
HERC1-202ENST00000558324 SEC61GP60059 68 aa4.57□□□□□ -1.68
HERC1-202ENST00000558324 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
HERC1-202ENST00000558324 A6NED7 52 aa4.54□□□□□ -1.68
HERC1-202ENST00000558324 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
HERC1-202ENST00000558324 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
HERC1-202ENST00000558324 A0A1B0GU33 70 aa4.49□□□□□ -1.69
HERC1-202ENST00000558324 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
HERC1-202ENST00000558324 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
HERC1-202ENST00000558324 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
HERC1-202ENST00000558324 A0A1B0GU69 56 aa4.45□□□□□ -1.7
HERC1-202ENST00000558324 MT1EP04732 61 aa4.44□□□□□ -1.7
HERC1-202ENST00000558324 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
HERC1-202ENST00000558324 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
HERC1-202ENST00000558324 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
HERC1-202ENST00000558324 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms