RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
TPM1-211ENST00000558314 NEBP20929 6669 aa6.91□□□□□ -1.3
TPM1-211ENST00000558314 UQCRQO14949 82 aa6.89□□□□□ -1.31
TPM1-211ENST00000558314 IMUPQ9GZP8 106 aa6.89□□□□□ -1.31
TPM1-211ENST00000558314 A0A087WVE0 104 aa6.88□□□□□ -1.31
TPM1-211ENST00000558314 TRAV22A0A0B4J277 110 aa6.88□□□□□ -1.31
TPM1-211ENST00000558314 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
TPM1-211ENST00000558314 CYP4F30PQ9H0H9 118 aa6.87□□□□□ -1.31
TPM1-211ENST00000558314 ATOX1O00244 68 aa6.86□□□□□ -1.31
TPM1-211ENST00000558314 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
TPM1-211ENST00000558314 LOC101927531A0A1B0GV80 90 aa6.84□□□□□ -1.31
TPM1-211ENST00000558314 MUC12Q9UKN1 5478 aa6.82□□□□□ -1.32
TPM1-211ENST00000558314 SCGB1A1P11684 91 aa6.82□□□□□ -1.32
TPM1-211ENST00000558314 H0Y9P7 68 aa6.79□□□□□ -1.32
TPM1-211ENST00000558314 MP68P56378 58 aa6.79□□□□□ -1.32
TPM1-211ENST00000558314 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
TPM1-211ENST00000558314 OCR1Q9BZK8 76 aa6.76□□□□□ -1.33
TPM1-211ENST00000558314 NDUFC1O43677 76 aa6.75□□□□□ -1.33
TPM1-211ENST00000558314 MT-ATP8P03928 68 aa6.75□□□□□ -1.33
TPM1-211ENST00000558314 KRTAP20-1Q3LI63 56 aa6.74□□□□□ -1.33
TPM1-211ENST00000558314 SMIM20Q8N5G0 67 aa6.73□□□□□ -1.33
TPM1-211ENST00000558314 H3BPC8 53 aa6.72□□□□□ -1.33
TPM1-211ENST00000558314 LINC00208Q96KT6 92 aa6.71□□□□□ -1.34
TPM1-211ENST00000558314 ADM2Q7Z4H4 148 aa6.68□□□□□ -1.34
TPM1-211ENST00000558314 KRTAP5-9P26371 169 aa6.67□□□□□ -1.34
TPM1-211ENST00000558314 KMT2DO14686 5537 aa6.64□□□□□ -1.35
TPM1-211ENST00000558314 A8MUN3 132 aa6.64□□□□□ -1.35
TPM1-211ENST00000558314 TRAV7A0A075B6U4 112 aa6.63□□□□□ -1.35
TPM1-211ENST00000558314 H0YAA0 97 aa6.63□□□□□ -1.35
TPM1-211ENST00000558314 MDN1Q9NU22 5596 aa6.59□□□□□ -1.35
TPM1-211ENST00000558314 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
TPM1-211ENST00000558314 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
TPM1-211ENST00000558314 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
TPM1-211ENST00000558314 R4GN34 69 aa6.52□□□□□ -1.37
TPM1-211ENST00000558314 SPRR2EP22531 72 aa6.51□□□□□ -1.37
TPM1-211ENST00000558314 SPRR2BP35325 72 aa6.51□□□□□ -1.37
TPM1-211ENST00000558314 SPRR2AP35326 72 aa6.51□□□□□ -1.37
TPM1-211ENST00000558314 MT1XP80297 61 aa6.51□□□□□ -1.37
TPM1-211ENST00000558314 SERP2Q8N6R1 65 aa6.51□□□□□ -1.37
TPM1-211ENST00000558314 M0QZ58 72 aa6.48□□□□□ -1.37
TPM1-211ENST00000558314 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
TPM1-211ENST00000558314 P0C880 135 aa6.48□□□□□ -1.37
TPM1-211ENST00000558314 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
TPM1-211ENST00000558314 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
TPM1-211ENST00000558314 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
TPM1-211ENST00000558314 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
TPM1-211ENST00000558314 C20orf197Q8N268 126 aa6.45□□□□□ -1.38
TPM1-211ENST00000558314 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
TPM1-211ENST00000558314 ACYP2P14621 99 aa6.4□□□□□ -1.38
TPM1-211ENST00000558314 COX7CP15954 63 aa6.37□□□□□ -1.39
TPM1-211ENST00000558314 SPANXA2-OT1Q8N9U9 137 aa6.37□□□□□ -1.39
TPM1-211ENST00000558314 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
TPM1-211ENST00000558314 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
TPM1-211ENST00000558314 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
TPM1-211ENST00000558314 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
TPM1-211ENST00000558314 LCE1AQ5T7P2 110 aa6.33□□□□□ -1.4
TPM1-211ENST00000558314 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
TPM1-211ENST00000558314 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
TPM1-211ENST00000558314 ANAPC13Q9BS18 74 aa6.31□□□□□ -1.4
TPM1-211ENST00000558314 SPRR2DP22532 72 aa6.3□□□□□ -1.4
TPM1-211ENST00000558314 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
TPM1-211ENST00000558314 KRTAP2-2Q9BYT5 123 aa6.26□□□□□ -1.41
TPM1-211ENST00000558314 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
TPM1-211ENST00000558314 H7BZZ5 65 aa6.18□□□□□ -1.42
TPM1-211ENST00000558314 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
TPM1-211ENST00000558314 COA5Q86WW8 74 aa6.13□□□□□ -1.43
TPM1-211ENST00000558314 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
TPM1-211ENST00000558314 CYSTM1Q9H1C7 97 aa6.1□□□□□ -1.43
TPM1-211ENST00000558314 CCDC179H3BU77 68 aa6.09□□□□□ -1.43
TPM1-211ENST00000558314 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.43
TPM1-211ENST00000558314 SEC61GP60059 68 aa6.04□□□□□ -1.44
TPM1-211ENST00000558314 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
TPM1-211ENST00000558314 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
TPM1-211ENST00000558314 TMEM258P61165 79 aa5.98□□□□□ -1.45
TPM1-211ENST00000558314 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
TPM1-211ENST00000558314 A0A0D9SG42 100 aa5.88□□□□□ -1.47
TPM1-211ENST00000558314 A0A1B0GU69 56 aa5.86□□□□□ -1.47
TPM1-211ENST00000558314 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
TPM1-211ENST00000558314 A0A1B0GU33 70 aa5.82□□□□□ -1.48
TPM1-211ENST00000558314 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
TPM1-211ENST00000558314 SPINT4Q6UDR6 99 aa5.8□□□□□ -1.48
TPM1-211ENST00000558314 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
TPM1-211ENST00000558314 MT1EP04732 61 aa5.79□□□□□ -1.48
TPM1-211ENST00000558314 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
TPM1-211ENST00000558314 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
TPM1-211ENST00000558314 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
TPM1-211ENST00000558314 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
TPM1-211ENST00000558314 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
TPM1-211ENST00000558314 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
TPM1-211ENST00000558314 SMIM26A0A096LP01 95 aa5.72□□□□□ -1.49
TPM1-211ENST00000558314 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
TPM1-211ENST00000558314 PCP4P48539 62 aa5.68□□□□□ -1.5
TPM1-211ENST00000558314 V9GYY9 64 aa5.67□□□□□ -1.5
TPM1-211ENST00000558314 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
TPM1-211ENST00000558314 UQCR11O14957 56 aa5.6□□□□□ -1.51
TPM1-211ENST00000558314 MT1GP13640 62 aa5.6□□□□□ -1.51
TPM1-211ENST00000558314 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
TPM1-211ENST00000558314 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
TPM1-211ENST00000558314 MT4P47944 62 aa5.56□□□□□ -1.52
TPM1-211ENST00000558314 Q1T7F1 81 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms