RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 DEFB104AQ8WTQ1 72 aa0.63□□□□□ -2.31
KTN1-220ENST00000555172 TENM2Q9NT68 2774 aa0.63□□□□□ -2.31
KTN1-220ENST00000555172 SPG11Q96JI7 2443 aa0.63□□□□□ -2.31
KTN1-220ENST00000555172 M0QZ58 72 aa0.63□□□□□ -2.31
KTN1-220ENST00000555172 CFAP54Q96N23 3096 aa0.62□□□□□ -2.31
KTN1-220ENST00000555172 RNF213Q63HN8 5207 aa0.62□□□□□ -2.31
KTN1-220ENST00000555172 HYDINQ4G0P3 5121 aa0.62□□□□□ -2.31
KTN1-220ENST00000555172 AKAP9Q99996 3911 aa0.62□□□□□ -2.31
KTN1-220ENST00000555172 C9orf92A6NGG3 77 aa0.61□□□□□ -2.31
KTN1-220ENST00000555172 TTTY10Q9BZA0 68 aa0.61□□□□□ -2.31
KTN1-220ENST00000555172 SVEP1Q4LDE5 3571 aa0.61□□□□□ -2.31
KTN1-220ENST00000555172 MGAQ8IWI9 3026 aa0.61□□□□□ -2.31
KTN1-220ENST00000555172 HSPG2P98160 4391 aa0.61□□□□□ -2.31
KTN1-220ENST00000555172 PKHD1L1Q86WI1 4243 aa0.61□□□□□ -2.31
KTN1-220ENST00000555172 SPRR2DP22532 72 aa0.59□□□□□ -2.31
KTN1-220ENST00000555172 ANKRD11Q6UB99 2663 aaPredicted RBP0.59□□□□□ -2.31
KTN1-220ENST00000555172 SACSQ9NZJ4 4579 aa0.59□□□□□ -2.31
KTN1-220ENST00000555172 FAM186AA6NE01 2351 aa0.59□□□□□ -2.32
KTN1-220ENST00000555172 STAB2Q8WWQ8 2551 aa0.59□□□□□ -2.32
KTN1-220ENST00000555172 DEFB110Q30KQ9 67 aa0.59□□□□□ -2.32
KTN1-220ENST00000555172 MAP1AP78559 2803 aaPredicted RBP0.59□□□□□ -2.32
KTN1-220ENST00000555172 HIVEP1P15822 2718 aa0.58□□□□□ -2.32
KTN1-220ENST00000555172 TNP1P09430 55 aa0.58□□□□□ -2.32
KTN1-220ENST00000555172 ACACBO00763 2458 aa0.58□□□□□ -2.32
KTN1-220ENST00000555172 WDR87Q6ZQQ6 2873 aa0.58□□□□□ -2.32
KTN1-220ENST00000555172 FLGP20930 4061 aaPredicted RBP0.58□□□□□ -2.32
KTN1-220ENST00000555172 ADGRG4Q8IZF6 3080 aa0.58□□□□□ -2.32
KTN1-220ENST00000555172 BIRC6Q9NR09 4857 aa0.57□□□□□ -2.32
KTN1-220ENST00000555172 ZANQ9Y493 2812 aa0.57□□□□□ -2.32
KTN1-220ENST00000555172 HMCN2Q8NDA2 5059 aa0.57□□□□□ -2.32
KTN1-220ENST00000555172 H3BSH0 61 aa0.56□□□□□ -2.32
KTN1-220ENST00000555172 USP9YO00507 2555 aaPredicted RBP0.56□□□□□ -2.32
KTN1-220ENST00000555172 TENM3Q9P273 2699 aa0.55□□□□□ -2.32
KTN1-220ENST00000555172 DMXL2Q8TDJ6 3036 aa0.55□□□□□ -2.32
KTN1-220ENST00000555172 DNAH8Q96JB1 4490 aa0.55□□□□□ -2.32
KTN1-220ENST00000555172 VPS13DQ5THJ4 4388 aa0.54□□□□□ -2.32
KTN1-220ENST00000555172 CSMD1Q96PZ7 3565 aa0.54□□□□□ -2.32
KTN1-220ENST00000555172 TGP01266 2768 aa0.54□□□□□ -2.32
KTN1-220ENST00000555172 WDFY4Q6ZS81 3184 aa0.53□□□□□ -2.32
KTN1-220ENST00000555172 SZT2Q5T011 3432 aa0.53□□□□□ -2.32
KTN1-220ENST00000555172 DNAH3Q8TD57 4116 aa0.53□□□□□ -2.32
KTN1-220ENST00000555172 ITPR1Q14643 2758 aa0.53□□□□□ -2.33
KTN1-220ENST00000555172 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
KTN1-220ENST00000555172 SPART-AS1P0CW21 52 aa0.52□□□□□ -2.33
KTN1-220ENST00000555172 LPAP08519 4548 aa0.51□□□□□ -2.33
KTN1-220ENST00000555172 DNAH9Q9NYC9 4486 aa0.5□□□□□ -2.33
KTN1-220ENST00000555172 ATMQ13315 3056 aa0.5□□□□□ -2.33
KTN1-220ENST00000555172 SPRR2BP35325 72 aa0.5□□□□□ -2.33
KTN1-220ENST00000555172 LAMA1P25391 3075 aa0.49□□□□□ -2.33
KTN1-220ENST00000555172 DYNC2H1Q8NCM8 4307 aaKnown RBP0.49□□□□□ -2.33
KTN1-220ENST00000555172 ANK3Q12955 4377 aaKnown RBP0.49□□□□□ -2.33
KTN1-220ENST00000555172 PKD1P98161 4303 aa0.49□□□□□ -2.33
KTN1-220ENST00000555172 C5orf42Q9H799 3197 aa0.48□□□□□ -2.33
KTN1-220ENST00000555172 LINC01590Q5TEZ4 76 aa0.48□□□□□ -2.33
KTN1-220ENST00000555172 APOBP04114 4563 aaKnown RBP0.48□□□□□ -2.33
KTN1-220ENST00000555172 DNAH2Q9P225 4427 aa0.48□□□□□ -2.33
KTN1-220ENST00000555172 SMG1Q96Q15 3661 aaKnown RBP0.47□□□□□ -2.33
KTN1-220ENST00000555172 TLN2Q9Y4G6 2542 aa0.47□□□□□ -2.33
KTN1-220ENST00000555172 PRCDQ00LT1 54 aa0.45□□□□□ -2.34
KTN1-220ENST00000555172 MXRA5Q9NR99 2828 aa0.45□□□□□ -2.34
KTN1-220ENST00000555172 FAT1Q14517 4588 aa0.45□□□□□ -2.34
KTN1-220ENST00000555172 LRP1BQ9NZR2 4599 aa0.45□□□□□ -2.34
KTN1-220ENST00000555172 NBEAL1Q6ZS30 2694 aa0.45□□□□□ -2.34
KTN1-220ENST00000555172 SRCAPQ6ZRS2 3230 aa0.44□□□□□ -2.34
KTN1-220ENST00000555172 MYO9AB2RTY4 2548 aa0.44□□□□□ -2.34
KTN1-220ENST00000555172 DNAH6Q9C0G6 4158 aa0.44□□□□□ -2.34
KTN1-220ENST00000555172 PRUNE2Q8WUY3 3088 aa0.43□□□□□ -2.34
KTN1-220ENST00000555172 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
KTN1-220ENST00000555172 USH2AO75445 5202 aa0.43□□□□□ -2.34
KTN1-220ENST00000555172 HERC2O95714 4834 aa0.43□□□□□ -2.34
KTN1-220ENST00000555172 MGAM2Q2M2H8 2515 aa0.43□□□□□ -2.34
KTN1-220ENST00000555172 MKI67P46013 3256 aaKnown RBP0.42□□□□□ -2.34
KTN1-220ENST00000555172 MT1AP04731 61 aa0.41□□□□□ -2.34
KTN1-220ENST00000555172 SPRR2AP35326 72 aa0.41□□□□□ -2.34
KTN1-220ENST00000555172 KRTAP8-1Q8IUC2 63 aa0.41□□□□□ -2.34
KTN1-220ENST00000555172 MUC3AQ02505 3323 aa0.41□□□□□ -2.34
KTN1-220ENST00000555172 LAMA3Q16787 3333 aa0.41□□□□□ -2.34
KTN1-220ENST00000555172 LRBAP50851 2863 aa0.41□□□□□ -2.34
KTN1-220ENST00000555172 FAT3Q8TDW7 4589 aa0.41□□□□□ -2.34
KTN1-220ENST00000555172 DNAH7Q8WXX0 4024 aa0.4□□□□□ -2.34
KTN1-220ENST00000555172 DNAH12Q6ZR08 3092 aa0.39□□□□□ -2.35
KTN1-220ENST00000555172 SMR3BP02814 79 aaPredicted RBP0.37□□□□□ -2.35
KTN1-220ENST00000555172 CEP295Q9C0D2 2601 aa0.37□□□□□ -2.35
KTN1-220ENST00000555172 DMDP11532 3685 aa0.37□□□□□ -2.35
KTN1-220ENST00000555172 DNAH1Q9P2D7 4330 aa0.36□□□□□ -2.35
KTN1-220ENST00000555172 CSMD2Q7Z408 3487 aa0.36□□□□□ -2.35
KTN1-220ENST00000555172 TEX15Q9BXT5 2789 aa0.36□□□□□ -2.35
KTN1-220ENST00000555172 TLN1Q9Y490 2541 aaKnown RBP0.36□□□□□ -2.35
KTN1-220ENST00000555172 K7EIM0 57 aa0.36□□□□□ -2.35
KTN1-220ENST00000555172 XIRP2A4UGR9 3374 aa0.36□□□□□ -2.35
KTN1-220ENST00000555172 CEP250Q9BV73 2442 aa0.36□□□□□ -2.35
KTN1-220ENST00000555172 SPTAN1Q13813 2472 aaKnown RBP0.36□□□□□ -2.35
KTN1-220ENST00000555172 FRYLO94915 3013 aa0.35□□□□□ -2.35
KTN1-220ENST00000555172 SPRR2EP22531 72 aa0.35□□□□□ -2.35
KTN1-220ENST00000555172 KRTAP19-5Q3LI72 72 aa0.35□□□□□ -2.35
KTN1-220ENST00000555172 DNHD1Q96M86 4753 aa0.34□□□□□ -2.35
KTN1-220ENST00000555172 CFAP46Q8IYW2 2715 aa0.34□□□□□ -2.35
KTN1-220ENST00000555172 LRP2P98164 4655 aa0.34□□□□□ -2.35
KTN1-220ENST00000555172 PKHD1P08F94 4074 aa0.34□□□□□ -2.35
KTN1-220ENST00000555172 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms