RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
NEK9-204ENST00000554258 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
NEK9-204ENST00000554258 FAM236AA0A1B0GUQ0 79 aa8.16□□□□□ -1.1
NEK9-204ENST00000554258 FAM236BA0A1B0GV22 79 aa8.16□□□□□ -1.1
NEK9-204ENST00000554258 H0Y9P7 68 aa8.14□□□□□ -1.11
NEK9-204ENST00000554258 ATOX1O00244 68 aa8.14□□□□□ -1.11
NEK9-204ENST00000554258 RBM12B-AS1Q9P1G2 102 aa8.14□□□□□ -1.11
NEK9-204ENST00000554258 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
NEK9-204ENST00000554258 C5orf47Q569G3 176 aa8.13□□□□□ -1.11
NEK9-204ENST00000554258 CYP4F30PQ9H0H9 118 aa8.13□□□□□ -1.11
NEK9-204ENST00000554258 SMIM20Q8N5G0 67 aa8.12□□□□□ -1.11
NEK9-204ENST00000554258 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
NEK9-204ENST00000554258 H3BPC8 53 aa8.07□□□□□ -1.12
NEK9-204ENST00000554258 MP68P56378 58 aa8.07□□□□□ -1.12
NEK9-204ENST00000554258 C1orf64Q8NEQ6 169 aa8.06□□□□□ -1.12
NEK9-204ENST00000554258 A6NN06 94 aa8.05□□□□□ -1.12
NEK9-204ENST00000554258 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
NEK9-204ENST00000554258 KRTAP2-2Q9BYT5 123 aa8.04□□□□□ -1.12
NEK9-204ENST00000554258 KRTAP2-1Q9BYU5 128 aa8.04□□□□□ -1.12
NEK9-204ENST00000554258 C4orf26Q17RF5 130 aa8.02□□□□□ -1.13
NEK9-204ENST00000554258 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
NEK9-204ENST00000554258 SERP2Q8N6R1 65 aa7.98□□□□□ -1.13
NEK9-204ENST00000554258 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
NEK9-204ENST00000554258 KLKP1Q107X0 134 aa7.96□□□□□ -1.14
NEK9-204ENST00000554258 SPRR2EP22531 72 aa7.89□□□□□ -1.15
NEK9-204ENST00000554258 SPRR2BP35325 72 aa7.89□□□□□ -1.15
NEK9-204ENST00000554258 SPRR2AP35326 72 aa7.89□□□□□ -1.15
NEK9-204ENST00000554258 COX7CP15954 63 aa7.87□□□□□ -1.15
NEK9-204ENST00000554258 C20orf197Q8N268 126 aa7.84□□□□□ -1.15
NEK9-204ENST00000554258 A8MUN3 132 aa7.83□□□□□ -1.16
NEK9-204ENST00000554258 SNURFQ9Y675 71 aa7.83□□□□□ -1.16
NEK9-204ENST00000554258 ANAPC13Q9BS18 74 aa7.78□□□□□ -1.16
NEK9-204ENST00000554258 DMAC1Q96GE9 116 aa7.77□□□□□ -1.17
NEK9-204ENST00000554258 S4R3F8 94 aa7.76□□□□□ -1.17
NEK9-204ENST00000554258 SPRR2FQ96RM1 72 aa7.75□□□□□ -1.17
NEK9-204ENST00000554258 KRTAP10-5P60370 271 aa7.74□□□□□ -1.17
NEK9-204ENST00000554258 LCA10Q71F78 164 aa7.74□□□□□ -1.17
NEK9-204ENST00000554258 SPANXA2-OT1Q8N9U9 137 aa7.72□□□□□ -1.17
NEK9-204ENST00000554258 MT1BP07438 61 aa7.69□□□□□ -1.18
NEK9-204ENST00000554258 NDUFC1O43677 76 aa7.68□□□□□ -1.18
NEK9-204ENST00000554258 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
NEK9-204ENST00000554258 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
NEK9-204ENST00000554258 Q5VV11 94 aa7.66□□□□□ -1.18
NEK9-204ENST00000554258 H7BZZ5 65 aa7.65□□□□□ -1.18
NEK9-204ENST00000554258 CCDC179H3BU77 68 aa7.64□□□□□ -1.19
NEK9-204ENST00000554258 ACYP2P14621 99 aa7.64□□□□□ -1.19
NEK9-204ENST00000554258 SPRR2DP22532 72 aa7.64□□□□□ -1.19
NEK9-204ENST00000554258 LCE1AQ5T7P2 110 aa7.61□□□□□ -1.19
NEK9-204ENST00000554258 LCE3BQ5TA77 95 aa7.51□□□□□ -1.21
NEK9-204ENST00000554258 DSTQ03001 7570 aaKnown RBP7.5□□□□□ -1.21
NEK9-204ENST00000554258 H0YAA0 97 aa7.5□□□□□ -1.21
NEK9-204ENST00000554258 KRTAP19-8Q3LI54 63 aa7.5□□□□□ -1.21
NEK9-204ENST00000554258 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
NEK9-204ENST00000554258 COA5Q86WW8 74 aa7.44□□□□□ -1.22
NEK9-204ENST00000554258 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
NEK9-204ENST00000554258 ATP5EP56381 51 aaPredicted RBP7.41□□□□□ -1.22
NEK9-204ENST00000554258 TMEM258P61165 79 aa7.38□□□□□ -1.23
NEK9-204ENST00000554258 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
NEK9-204ENST00000554258 SPRR2GQ9BYE4 73 aa7.38□□□□□ -1.23
NEK9-204ENST00000554258 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
NEK9-204ENST00000554258 CRIPTQ9P021 101 aa7.33□□□□□ -1.24
NEK9-204ENST00000554258 PCP4P48539 62 aa7.3□□□□□ -1.24
NEK9-204ENST00000554258 P0C880 135 aa7.28□□□□□ -1.24
NEK9-204ENST00000554258 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
NEK9-204ENST00000554258 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
NEK9-204ENST00000554258 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
NEK9-204ENST00000554258 SERP1Q9Y6X1 66 aa7.16□□□□□ -1.26
NEK9-204ENST00000554258 AHNAK2Q8IVF2 5795 aa7.14□□□□□ -1.27
NEK9-204ENST00000554258 HMCN1Q96RW7 5635 aa7.13□□□□□ -1.27
NEK9-204ENST00000554258 R4GN34 69 aa7.13□□□□□ -1.27
NEK9-204ENST00000554258 SEC61GP60059 68 aa7.1□□□□□ -1.27
NEK9-204ENST00000554258 M0QZ58 72 aa7.09□□□□□ -1.27
NEK9-204ENST00000554258 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
NEK9-204ENST00000554258 LINC01558Q9Y6Z2 57 aa7.05□□□□□ -1.28
NEK9-204ENST00000554258 A0A1B0GU69 56 aa7.02□□□□□ -1.29
NEK9-204ENST00000554258 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
NEK9-204ENST00000554258 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
NEK9-204ENST00000554258 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
NEK9-204ENST00000554258 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
NEK9-204ENST00000554258 A0A1B0GU33 70 aa6.98□□□□□ -1.29
NEK9-204ENST00000554258 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
NEK9-204ENST00000554258 KRTAP5-10Q6L8G5 202 aa6.98□□□□□ -1.29
NEK9-204ENST00000554258 MT1XP80297 61 aa6.96□□□□□ -1.3
NEK9-204ENST00000554258 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
NEK9-204ENST00000554258 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
NEK9-204ENST00000554258 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
NEK9-204ENST00000554258 SMIM26A0A096LP01 95 aa6.91□□□□□ -1.3
NEK9-204ENST00000554258 Q1T7F1 81 aa6.9□□□□□ -1.3
NEK9-204ENST00000554258 V9GYY9 64 aa6.89□□□□□ -1.31
NEK9-204ENST00000554258 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
NEK9-204ENST00000554258 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
NEK9-204ENST00000554258 KRTAP5-7Q6L8G8 165 aa6.84□□□□□ -1.31
NEK9-204ENST00000554258 MT4P47944 62 aa6.77□□□□□ -1.33
NEK9-204ENST00000554258 A0A0D9SG42 100 aa6.76□□□□□ -1.33
NEK9-204ENST00000554258 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
NEK9-204ENST00000554258 UQCR11O14957 56 aa6.75□□□□□ -1.33
NEK9-204ENST00000554258 PSPHP1O15172 72 aa6.74□□□□□ -1.33
NEK9-204ENST00000554258 A8MU10 97 aa6.71□□□□□ -1.34
NEK9-204ENST00000554258 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
NEK9-204ENST00000554258 LCE4AQ5TA78 99 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms