RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.19
ACTN1-211ENST00000553882 Q5VSD8 79 aa7.64□□□□□ -1.19
ACTN1-211ENST00000553882 A0A1B0GU33 70 aa7.63□□□□□ -1.19
ACTN1-211ENST00000553882 KRTAP10-8P60410 259 aa7.61□□□□□ -1.19
ACTN1-211ENST00000553882 RYR3Q15413 4870 aa7.61□□□□□ -1.19
ACTN1-211ENST00000553882 H1FX-AS1Q4G0G2 97 aa7.58□□□□□ -1.2
ACTN1-211ENST00000553882 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
ACTN1-211ENST00000553882 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
ACTN1-211ENST00000553882 RYR1P21817 5038 aa7.53□□□□□ -1.2
ACTN1-211ENST00000553882 KIAA1109Q2LD37 5005 aa7.53□□□□□ -1.2
ACTN1-211ENST00000553882 RPL37P61927 97 aaKnown RBP7.53□□□□□ -1.2
ACTN1-211ENST00000553882 XP32Q5T750 250 aa7.53□□□□□ -1.2
ACTN1-211ENST00000553882 CSAG1Q6PB30 78 aa7.52□□□□□ -1.21
ACTN1-211ENST00000553882 LPAP08519 4548 aa7.47□□□□□ -1.21
ACTN1-211ENST00000553882 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
ACTN1-211ENST00000553882 ROMO1P60602 79 aa7.44□□□□□ -1.22
ACTN1-211ENST00000553882 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
ACTN1-211ENST00000553882 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.22
ACTN1-211ENST00000553882 S4R3F8 94 aa7.4□□□□□ -1.22
ACTN1-211ENST00000553882 LRP2P98164 4655 aa7.4□□□□□ -1.23
ACTN1-211ENST00000553882 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
ACTN1-211ENST00000553882 A0A0D9SG42 100 aa7.35□□□□□ -1.23
ACTN1-211ENST00000553882 K7ERS5 55 aa7.35□□□□□ -1.23
ACTN1-211ENST00000553882 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
ACTN1-211ENST00000553882 EPPK1P58107 5090 aaKnown RBP7.34□□□□□ -1.23
ACTN1-211ENST00000553882 CRIPTQ9P021 101 aa7.32□□□□□ -1.24
ACTN1-211ENST00000553882 P0C880 135 aa7.31□□□□□ -1.24
ACTN1-211ENST00000553882 ABCA13Q86UQ4 5058 aa7.3□□□□□ -1.24
ACTN1-211ENST00000553882 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
ACTN1-211ENST00000553882 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
ACTN1-211ENST00000553882 LUZP6Q538Z0 58 aa7.21□□□□□ -1.26
ACTN1-211ENST00000553882 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
ACTN1-211ENST00000553882 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
ACTN1-211ENST00000553882 SPINT4Q6UDR6 99 aa7.09□□□□□ -1.27
ACTN1-211ENST00000553882 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
ACTN1-211ENST00000553882 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
ACTN1-211ENST00000553882 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
ACTN1-211ENST00000553882 M0QZ58 72 aa6.98□□□□□ -1.29
ACTN1-211ENST00000553882 MUC17Q685J3 4493 aa6.97□□□□□ -1.29
ACTN1-211ENST00000553882 MUC2Q02817 5179 aa6.93□□□□□ -1.3
ACTN1-211ENST00000553882 HERC2O95714 4834 aa6.93□□□□□ -1.3
ACTN1-211ENST00000553882 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
ACTN1-211ENST00000553882 R4GN34 69 aa6.9□□□□□ -1.3
ACTN1-211ENST00000553882 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
ACTN1-211ENST00000553882 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
ACTN1-211ENST00000553882 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
ACTN1-211ENST00000553882 HERC1Q15751 4861 aa6.68□□□□□ -1.34
ACTN1-211ENST00000553882 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
ACTN1-211ENST00000553882 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
ACTN1-211ENST00000553882 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
ACTN1-211ENST00000553882 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
ACTN1-211ENST00000553882 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
ACTN1-211ENST00000553882 FAT4Q6V0I7 4981 aa6.56□□□□□ -1.36
ACTN1-211ENST00000553882 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.37
ACTN1-211ENST00000553882 RNF213Q63HN8 5207 aa6.42□□□□□ -1.38
ACTN1-211ENST00000553882 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
ACTN1-211ENST00000553882 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
ACTN1-211ENST00000553882 UBR4Q5T4S7 5183 aa6.35□□□□□ -1.39
ACTN1-211ENST00000553882 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
ACTN1-211ENST00000553882 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
ACTN1-211ENST00000553882 M0R2T5 61 aa6.29□□□□□ -1.4
ACTN1-211ENST00000553882 TNP1P09430 55 aa6.26□□□□□ -1.41
ACTN1-211ENST00000553882 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.41
ACTN1-211ENST00000553882 MT1HP80294 61 aa6.2□□□□□ -1.42
ACTN1-211ENST00000553882 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
ACTN1-211ENST00000553882 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
ACTN1-211ENST00000553882 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
ACTN1-211ENST00000553882 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
ACTN1-211ENST00000553882 MT1FP04733 61 aa6.12□□□□□ -1.43
ACTN1-211ENST00000553882 MT2AP02795 61 aa6.1□□□□□ -1.43
ACTN1-211ENST00000553882 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
ACTN1-211ENST00000553882 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
ACTN1-211ENST00000553882 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
ACTN1-211ENST00000553882 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
ACTN1-211ENST00000553882 MT1BP07438 61 aa5.89□□□□□ -1.47
ACTN1-211ENST00000553882 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
ACTN1-211ENST00000553882 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
ACTN1-211ENST00000553882 MT1XP80297 61 aa5.85□□□□□ -1.47
ACTN1-211ENST00000553882 LCE2BO14633 110 aa5.81□□□□□ -1.48
ACTN1-211ENST00000553882 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
ACTN1-211ENST00000553882 KRTAP8-1Q8IUC2 63 aa5.76□□□□□ -1.49
ACTN1-211ENST00000553882 USH2AO75445 5202 aa5.74□□□□□ -1.49
ACTN1-211ENST00000553882 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
ACTN1-211ENST00000553882 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
ACTN1-211ENST00000553882 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
ACTN1-211ENST00000553882 KMT2DO14686 5537 aa5.62□□□□□ -1.51
ACTN1-211ENST00000553882 INE1O15225 51 aa5.61□□□□□ -1.51
ACTN1-211ENST00000553882 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
ACTN1-211ENST00000553882 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
ACTN1-211ENST00000553882 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
ACTN1-211ENST00000553882 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
ACTN1-211ENST00000553882 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
ACTN1-211ENST00000553882 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
ACTN1-211ENST00000553882 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
ACTN1-211ENST00000553882 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
ACTN1-211ENST00000553882 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
ACTN1-211ENST00000553882 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
ACTN1-211ENST00000553882 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
ACTN1-211ENST00000553882 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
ACTN1-211ENST00000553882 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms