RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 MUC17Q685J3 4493 aa6.15□□□□□ -1.43
NEK9-202ENST00000553823 KLKP1Q107X0 134 aa6.14□□□□□ -1.43
NEK9-202ENST00000553823 NDUFC1O43677 76 aa6.08□□□□□ -1.44
NEK9-202ENST00000553823 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
NEK9-202ENST00000553823 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
NEK9-202ENST00000553823 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
NEK9-202ENST00000553823 H7BZZ5 65 aa6.04□□□□□ -1.44
NEK9-202ENST00000553823 HRES1P13985 223 aa6.04□□□□□ -1.44
NEK9-202ENST00000553823 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
NEK9-202ENST00000553823 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
NEK9-202ENST00000553823 MPLKIPQ8TAP9 179 aa5.99□□□□□ -1.45
NEK9-202ENST00000553823 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
NEK9-202ENST00000553823 RBM12B-AS1Q9P1G2 102 aa5.98□□□□□ -1.45
NEK9-202ENST00000553823 TMEM258P61165 79 aa5.95□□□□□ -1.46
NEK9-202ENST00000553823 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
NEK9-202ENST00000553823 FAM236DA0A1B0GTK5 79 aa5.93□□□□□ -1.46
NEK9-202ENST00000553823 A8MUN3 132 aa5.93□□□□□ -1.46
NEK9-202ENST00000553823 FAM236CP0DP71 79 aa5.93□□□□□ -1.46
NEK9-202ENST00000553823 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
NEK9-202ENST00000553823 RNF213Q63HN8 5207 aa5.93□□□□□ -1.46
NEK9-202ENST00000553823 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
NEK9-202ENST00000553823 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
NEK9-202ENST00000553823 ATP5EP56381 51 aaPredicted RBP5.91□□□□□ -1.46
NEK9-202ENST00000553823 MUC2Q02817 5179 aa5.89□□□□□ -1.47
NEK9-202ENST00000553823 ACYP2P14621 99 aa5.89□□□□□ -1.47
NEK9-202ENST00000553823 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
NEK9-202ENST00000553823 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
NEK9-202ENST00000553823 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
NEK9-202ENST00000553823 COA5Q86WW8 74 aa5.8□□□□□ -1.48
NEK9-202ENST00000553823 S4R3F8 94 aa5.8□□□□□ -1.48
NEK9-202ENST00000553823 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
NEK9-202ENST00000553823 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
NEK9-202ENST00000553823 LCA10Q71F78 164 aa5.76□□□□□ -1.49
NEK9-202ENST00000553823 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
NEK9-202ENST00000553823 MT1HP80294 61 aa5.71□□□□□ -1.5
NEK9-202ENST00000553823 SPTSSBQ8NFR3 76 aa5.71□□□□□ -1.5
NEK9-202ENST00000553823 RPS28P62857 69 aaKnown RBP5.69□□□□□ -1.5
NEK9-202ENST00000553823 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
NEK9-202ENST00000553823 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
NEK9-202ENST00000553823 M0R2T5 61 aa5.65□□□□□ -1.5
NEK9-202ENST00000553823 SMIM26A0A096LP01 95 aa5.59□□□□□ -1.51
NEK9-202ENST00000553823 H0YAA0 97 aa5.54□□□□□ -1.52
NEK9-202ENST00000553823 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
NEK9-202ENST00000553823 V9GYY9 64 aa5.53□□□□□ -1.52
NEK9-202ENST00000553823 SEC61GP60059 68 aa5.52□□□□□ -1.53
NEK9-202ENST00000553823 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
NEK9-202ENST00000553823 Q1T7F1 81 aa5.52□□□□□ -1.53
NEK9-202ENST00000553823 ADM2Q7Z4H4 148 aa5.52□□□□□ -1.53
NEK9-202ENST00000553823 A0A1B0GU69 56 aa5.5□□□□□ -1.53
NEK9-202ENST00000553823 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
NEK9-202ENST00000553823 P0C880 135 aa5.46□□□□□ -1.54
NEK9-202ENST00000553823 MT2AP02795 61 aa5.45□□□□□ -1.54
NEK9-202ENST00000553823 PSPHP1O15172 72 aa5.42□□□□□ -1.54
NEK9-202ENST00000553823 MT1FP04733 61 aa5.41□□□□□ -1.54
NEK9-202ENST00000553823 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
NEK9-202ENST00000553823 A0A1B0GU33 70 aa5.37□□□□□ -1.55
NEK9-202ENST00000553823 Q5VV11 94 aa5.37□□□□□ -1.55
NEK9-202ENST00000553823 CRIPTQ9P021 101 aa5.37□□□□□ -1.55
NEK9-202ENST00000553823 M0QZ58 72 aa5.33□□□□□ -1.56
NEK9-202ENST00000553823 R4GN34 69 aa5.33□□□□□ -1.56
NEK9-202ENST00000553823 UQCR11O14957 56 aa5.31□□□□□ -1.56
NEK9-202ENST00000553823 KRTAP13-4Q3LI77 160 aa5.29□□□□□ -1.56
NEK9-202ENST00000553823 SPATA8Q6RVD6 105 aa5.28□□□□□ -1.56
NEK9-202ENST00000553823 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
NEK9-202ENST00000553823 A6NED7 52 aa5.26□□□□□ -1.57
NEK9-202ENST00000553823 MIR22HGQ0VDD5 57 aa5.23□□□□□ -1.57
NEK9-202ENST00000553823 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
NEK9-202ENST00000553823 A0A0D9SG42 100 aa5.2□□□□□ -1.58
NEK9-202ENST00000553823 A8MU10 97 aa5.18□□□□□ -1.58
NEK9-202ENST00000553823 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
NEK9-202ENST00000553823 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.59
NEK9-202ENST00000553823 A6NN06 94 aa5.13□□□□□ -1.59
NEK9-202ENST00000553823 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
NEK9-202ENST00000553823 MT1BP07438 61 aa5.09□□□□□ -1.59
NEK9-202ENST00000553823 SPINT4Q6UDR6 99 aa5.09□□□□□ -1.59
NEK9-202ENST00000553823 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
NEK9-202ENST00000553823 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
NEK9-202ENST00000553823 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
NEK9-202ENST00000553823 K7ERS5 55 aa5.04□□□□□ -1.6
NEK9-202ENST00000553823 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
NEK9-202ENST00000553823 USH2AO75445 5202 aa5□□□□□ -1.61
NEK9-202ENST00000553823 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
NEK9-202ENST00000553823 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
NEK9-202ENST00000553823 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
NEK9-202ENST00000553823 MT1XP80297 61 aa4.9□□□□□ -1.63
NEK9-202ENST00000553823 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
NEK9-202ENST00000553823 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
NEK9-202ENST00000553823 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
NEK9-202ENST00000553823 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
NEK9-202ENST00000553823 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
NEK9-202ENST00000553823 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
NEK9-202ENST00000553823 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
NEK9-202ENST00000553823 CRCT1Q9UGL9 99 aa4.81□□□□□ -1.64
NEK9-202ENST00000553823 ROMO1P60602 79 aa4.79□□□□□ -1.64
NEK9-202ENST00000553823 TNP1P09430 55 aa4.72□□□□□ -1.65
NEK9-202ENST00000553823 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
NEK9-202ENST00000553823 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
NEK9-202ENST00000553823 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
NEK9-202ENST00000553823 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
NEK9-202ENST00000553823 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms